RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 CTBSQ01459 385 aa16.16■□□□□ 0.18
TPM1-219ENST00000559397 GALNT1Q10472 559 aaPredicted RBP16.16■□□□□ 0.18
TPM1-219ENST00000559397 LRP8Q14114 963 aa16.16■□□□□ 0.18
TPM1-219ENST00000559397 SPRED3Q2MJR0 410 aa16.16■□□□□ 0.18
TPM1-219ENST00000559397 HLA-BQ31612 363 aa16.16■□□□□ 0.18
TPM1-219ENST00000559397 SPDYAQ5MJ70 313 aa16.16■□□□□ 0.18
TPM1-219ENST00000559397 TCEAL6Q6IPX3 200 aa16.16■□□□□ 0.18
TPM1-219ENST00000559397 IL27RAQ6UWB1 636 aa16.16■□□□□ 0.18
TPM1-219ENST00000559397 FAM83HQ6ZRV2 1179 aaPredicted RBP16.16■□□□□ 0.18
TPM1-219ENST00000559397 NRROSQ86YC3 692 aa16.16■□□□□ 0.18
TPM1-219ENST00000559397 CCNYL1Q8N7R7 359 aa16.16■□□□□ 0.18
TPM1-219ENST00000559397 GPBAR1Q8TDU6 330 aa16.16■□□□□ 0.18
TPM1-219ENST00000559397 ELMO1Q92556 727 aa16.16■□□□□ 0.18
TPM1-219ENST00000559397 TCEAL3Q969E4 200 aa16.16■□□□□ 0.18
TPM1-219ENST00000559397 NUSAP1Q9BXS6 441 aaKnown RBP16.16■□□□□ 0.18
TPM1-219ENST00000559397 WWP1Q9H0M0 922 aa16.16■□□□□ 0.18
TPM1-219ENST00000559397 ACSS2Q9NR19 701 aa16.16■□□□□ 0.18
TPM1-219ENST00000559397 KLC4Q9NSK0 619 aa16.16■□□□□ 0.18
TPM1-219ENST00000559397 HEY2Q9UBP5 337 aa16.16■□□□□ 0.18
TPM1-219ENST00000559397 RNF112Q9ULX5 631 aa16.16■□□□□ 0.18
TPM1-219ENST00000559397 A0A1B0GTQ1 180 aa16.15■□□□□ 0.18
TPM1-219ENST00000559397 KLHL33A6NCF5 533 aa16.15■□□□□ 0.18
TPM1-219ENST00000559397 NPEPPSL1A6NEC2 478 aa16.15■□□□□ 0.18
TPM1-219ENST00000559397 SYCE1LA8MT33 242 aa16.15■□□□□ 0.18
TPM1-219ENST00000559397 H3BM21 787 aa16.15■□□□□ 0.18
TPM1-219ENST00000559397 BTN3A1O00481 513 aa16.15■□□□□ 0.18
TPM1-219ENST00000559397 UBOX5O94941 541 aa16.15■□□□□ 0.18
TPM1-219ENST00000559397 CELA2BP08218 269 aaPredicted RBP16.15■□□□□ 0.18
TPM1-219ENST00000559397 SYPP08247 313 aa16.15■□□□□ 0.18
TPM1-219ENST00000559397 DGKAP23743 735 aa16.15■□□□□ 0.18
TPM1-219ENST00000559397 CLCNKAP51800 687 aa16.15■□□□□ 0.18
TPM1-219ENST00000559397 HNRNPKP61978 463 aaKnown RBP eCLIP16.15■□□□□ 0.18
TPM1-219ENST00000559397 HERVK_113P63132 956 aa16.15■□□□□ 0.18
TPM1-219ENST00000559397 NFE2L1Q14494 772 aa16.15■□□□□ 0.18
TPM1-219ENST00000559397 SETDB1Q15047 1291 aa16.15■□□□□ 0.18
TPM1-219ENST00000559397 CFAP157Q5JU67 520 aa16.15■□□□□ 0.18
TPM1-219ENST00000559397 ZNF678Q5SXM1 525 aa16.15■□□□□ 0.18
TPM1-219ENST00000559397 CFAP206Q8IYR0 622 aa16.15■□□□□ 0.18
TPM1-219ENST00000559397 ZBTB2Q8N680 514 aa16.15■□□□□ 0.18
TPM1-219ENST00000559397 LILRA3Q8N6C8 439 aaPredicted RBP16.15■□□□□ 0.18
TPM1-219ENST00000559397 HM13Q8TCT9 377 aa16.15■□□□□ 0.18
TPM1-219ENST00000559397 PHF21BQ96EK2 531 aa16.15■□□□□ 0.18
TPM1-219ENST00000559397 TRMOQ9BU70 441 aa16.15■□□□□ 0.18
TPM1-219ENST00000559397 ERVK-6Q9BXR3 956 aa16.15■□□□□ 0.18
TPM1-219ENST00000559397 MYLK2Q9H1R3 596 aa16.15■□□□□ 0.18
TPM1-219ENST00000559397 GSTO2Q9H4Y5 243 aa16.15■□□□□ 0.18
TPM1-219ENST00000559397 COG4Q9H9E3 785 aa16.15■□□□□ 0.18
TPM1-219ENST00000559397 IL21RQ9HBE5 538 aa16.15■□□□□ 0.18
TPM1-219ENST00000559397 TMCO1Q9UM00 188 aa16.15■□□□□ 0.18
TPM1-219ENST00000559397 KCNK6Q9Y257 313 aa16.15■□□□□ 0.18
TPM1-219ENST00000559397 WDR87Q6ZQQ6 2873 aa16.15■□□□□ 0.18
TPM1-219ENST00000559397 SLC5A10A0PJK1 596 aa16.14■□□□□ 0.18
TPM1-219ENST00000559397 EIF3FO00303 357 aaPredicted RBP16.14■□□□□ 0.18
TPM1-219ENST00000559397 GPC4O75487 556 aa16.14■□□□□ 0.18
TPM1-219ENST00000559397 PIAS2O75928 621 aa16.14■□□□□ 0.18
TPM1-219ENST00000559397 ZNF806P0C7X5 589 aa16.14■□□□□ 0.18
TPM1-219ENST00000559397 CTSEP14091 401 aa16.14■□□□□ 0.18
TPM1-219ENST00000559397 ENGP17813 658 aa16.14■□□□□ 0.18
TPM1-219ENST00000559397 MPSTP25325 297 aa16.14■□□□□ 0.18
TPM1-219ENST00000559397 AK4P27144 223 aaPredicted RBP16.14■□□□□ 0.18
TPM1-219ENST00000559397 RGS4P49798 205 aa16.14■□□□□ 0.18
TPM1-219ENST00000559397 BNIP1Q12981 228 aa16.14■□□□□ 0.18
TPM1-219ENST00000559397 GBX1Q14549 363 aa16.14■□□□□ 0.18
TPM1-219ENST00000559397 UNC50Q53HI1 259 aa16.14■□□□□ 0.18
TPM1-219ENST00000559397 ACSBG2Q5FVE4 666 aa16.14■□□□□ 0.18
TPM1-219ENST00000559397 PRRT3Q5FWE3 981 aa16.14■□□□□ 0.18
TPM1-219ENST00000559397 METRNLQ641Q3 311 aa16.14■□□□□ 0.18
TPM1-219ENST00000559397 FRMD7Q6ZUT3 714 aa16.14■□□□□ 0.18
TPM1-219ENST00000559397 PTGR2Q8N8N7 351 aaPredicted RBP16.14■□□□□ 0.18
TPM1-219ENST00000559397 ZNF548Q8NEK5 533 aaPredicted RBP16.14■□□□□ 0.18
TPM1-219ENST00000559397 STON2Q8WXE9 905 aa16.14■□□□□ 0.18
TPM1-219ENST00000559397 GAREM1Q9H706 876 aa16.14■□□□□ 0.18
TPM1-219ENST00000559397 SPASTQ9UBP0 616 aa16.14■□□□□ 0.18
TPM1-219ENST00000559397 CDYLQ9Y232 598 aa16.14■□□□□ 0.18
TPM1-219ENST00000559397 MATN2O00339 956 aa16.14■□□□□ 0.17
TPM1-219ENST00000559397 KPNA5O15131 536 aa16.14■□□□□ 0.17
TPM1-219ENST00000559397 DFNA5O60443 496 aa16.14■□□□□ 0.17
TPM1-219ENST00000559397 CBSLP0DN79 551 aa16.14■□□□□ 0.17
TPM1-219ENST00000559397 SERPINB3P29508 390 aa16.14■□□□□ 0.17
TPM1-219ENST00000559397 CBSP35520 551 aa16.14■□□□□ 0.17
TPM1-219ENST00000559397 RPL14P50914 215 aaKnown RBP16.14■□□□□ 0.17
TPM1-219ENST00000559397 SPEM2Q0P670 501 aa16.14■□□□□ 0.17
TPM1-219ENST00000559397 BNIP3Q12983 259 aa16.14■□□□□ 0.17
TPM1-219ENST00000559397 TUBB3Q13509 450 aa16.14■□□□□ 0.17
TPM1-219ENST00000559397 C1orf61Q13536 156 aa16.14■□□□□ 0.17
TPM1-219ENST00000559397 TCEA2Q15560 299 aa16.14■□□□□ 0.17
TPM1-219ENST00000559397 TTLL9Q3SXZ7 439 aa16.14■□□□□ 0.17
TPM1-219ENST00000559397 FAM91A1Q658Y4 838 aa16.14■□□□□ 0.17
TPM1-219ENST00000559397 CYHR1Q6ZMK1 362 aa16.14■□□□□ 0.17
TPM1-219ENST00000559397 ADAMTSL2Q86TH1 951 aa16.14■□□□□ 0.17
TPM1-219ENST00000559397 MTDHQ86UE4 582 aaKnown RBP16.14■□□□□ 0.17
TPM1-219ENST00000559397 GPSM1Q86YR5 675 aa16.14■□□□□ 0.17
TPM1-219ENST00000559397 ERP27Q96DN0 273 aa16.14■□□□□ 0.17
TPM1-219ENST00000559397 C1QTNF3Q9BXJ4 246 aa16.14■□□□□ 0.17
TPM1-219ENST00000559397 ZDHHC2Q9UIJ5 367 aa16.14■□□□□ 0.17
TPM1-219ENST00000559397 SLC12A4Q9UP95 1085 aa16.14■□□□□ 0.17
TPM1-219ENST00000559397 LNP1A1A4G5 178 aa16.13■□□□□ 0.17
TPM1-219ENST00000559397 SLCO1B7G3V0H7 640 aa16.13■□□□□ 0.17
TPM1-219ENST00000559397 STX16-NPEPL1H3BU86 382 aa16.13■□□□□ 0.17
TPM1-219ENST00000559397 STX16O14662 325 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms