RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 ZZEF1O43149 2961 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 LRP4O75096 1905 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 ZCWPW2A0A1B0GU75 182 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 SLC5A10A0PJK1 596 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 PABPN1LA6NDY0 278 aaKnown RBP4.24□□□□□ -1.73
SNX1-205ENST00000559339 ZNF839A8K0R7 811 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 EFCAB8A8MWE9 144 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 ISM1B1AKI9 464 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 BHMG1C9JSJ3 638 aaPredicted RBP4.24□□□□□ -1.73
SNX1-205ENST00000559339 TK2O00142 265 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 BTN3A1O00481 513 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 TTI1O43156 1089 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 KIF1CO43896 1103 aaKnown RBP4.24□□□□□ -1.73
SNX1-205ENST00000559339 RAD1O60671 282 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 VPS26AO75436 327 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 GPC4O75487 556 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 KIAA0754O94854 1291 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 S1PR4O95977 384 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 TUBB4AP04350 444 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 ITGB2P05107 769 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 MSL3P1P0C860 447 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 SFTPCP11686 197 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 FGF5P12034 268 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 ENO3P13929 434 aaPredicted RBP4.24□□□□□ -1.73
SNX1-205ENST00000559339 FOLR1P15328 257 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 ITGB6P18564 788 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 CYP2A7P20853 494 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 CD9P21926 228 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 ARNTP27540 789 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 AOAHP28039 575 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 ACADLP28330 430 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 ATP5DP30049 168 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 SKIV2L2P42285 1042 aaKnown RBP4.24□□□□□ -1.73
SNX1-205ENST00000559339 MAGEA3P43357 314 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 RAB28P51157 221 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 KPNA2P52292 529 aaKnown RBP4.24□□□□□ -1.73
SNX1-205ENST00000559339 ARL4CP56559 192 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 SH3BP2P78314 561 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 MC1RQ01726 317 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 CKAP4Q07065 602 aaKnown RBP4.24□□□□□ -1.73
SNX1-205ENST00000559339 DHX9Q08211 1270 aaKnown RBP4.24□□□□□ -1.73
SNX1-205ENST00000559339 ABHD18Q0P651 414 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 CTBP1Q13363 440 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 MAP7Q14244 749 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 SEMA3AQ14563 771 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 CRYMQ14894 314 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 KIR2DS3Q14952 304 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 NAA25Q14CX7 972 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 TGIF1Q15583 401 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 KCTD19Q17RG1 926 aaPredicted RBP4.24□□□□□ -1.73
SNX1-205ENST00000559339 BBS9Q3SYG4 887 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 ZNF658BQ4V348 819 aaPredicted RBP4.24□□□□□ -1.73
SNX1-205ENST00000559339 HSP90AA5PQ58FG0 334 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 SPANXN3Q5MJ09 141 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 ANKRD22Q5VYY1 191 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 LRRC8EQ6NSJ5 796 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 SPESP1Q6UW49 350 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 C6orf15Q6UXA7 325 aaPredicted RBP4.24□□□□□ -1.73
SNX1-205ENST00000559339 NAPRTQ6XQN6 538 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 SYT10Q6XYQ8 523 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 UNC5AQ6ZN44 842 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 KIAA0408Q6ZU52 694 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 KCNMB4Q86W47 210 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 ZFAND4Q86XD8 727 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 TMEM126BQ8IUX1 230 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 PALM2Q8IXS6 379 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 GPR135Q8IZ08 494 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 KRT222Q8N1A0 295 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 D2HGDHQ8N465 521 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 LSM14AQ8ND56 463 aaKnown RBP4.24□□□□□ -1.73
SNX1-205ENST00000559339 SPATA4Q8NEY3 305 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 DENND1AQ8TEH3 1009 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 SNRNP27Q8WVK2 155 aaKnown RBP4.24□□□□□ -1.73
SNX1-205ENST00000559339 SEC14L1Q92503 715 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 LPGAT1Q92604 370 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 NKD1Q969G9 470 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 RAD51AP1Q96B01 352 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 FAM136AQ96C01 138 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 TCTN2Q96GX1 697 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 SNF8Q96H20 258 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 BIRC8Q96P09 236 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 CATSPER2Q96P56 530 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 KRT12Q99456 494 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 EBNA1BP2Q99848 306 aaKnown RBP4.24□□□□□ -1.73
SNX1-205ENST00000559339 TRIM31Q9BZY9 425 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 RAB17Q9H0T7 212 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 P2RY12Q9H244 342 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 PRORYQ9H606 182 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 XKR8Q9H6D3 395 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 APMAPQ9HDC9 416 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 INTS7Q9NVH2 962 aaKnown RBP4.24□□□□□ -1.73
SNX1-205ENST00000559339 IRAK4Q9NWZ3 460 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 SIDT1Q9NXL6 827 aaKnown RBP4.24□□□□□ -1.73
SNX1-205ENST00000559339 UTP6Q9NYH9 597 aaKnown RBP4.24□□□□□ -1.73
SNX1-205ENST00000559339 TAS2R13Q9NYV9 303 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 ACTR10Q9NZ32 417 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.24□□□□□ -1.73
SNX1-205ENST00000559339 SEMA5BQ9P283 1151 aa4.24□□□□□ -1.73
SNX1-205ENST00000559339 MARCH4Q9P2E8 410 aaPredicted RBP4.24□□□□□ -1.73
SNX1-205ENST00000559339 TXNDC16Q9P2K2 825 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms