RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 AMIGO1Q86WK6 493 aa13.42□□□□□ -0.26
TSPAN3-205ENST00000558745 OOSP2Q86WS3 158 aa13.42□□□□□ -0.26
TSPAN3-205ENST00000558745 TBC1D21Q8IYX1 336 aa13.42□□□□□ -0.26
TSPAN3-205ENST00000558745 ADGRF3Q8IZF5 1079 aa13.42□□□□□ -0.26
TSPAN3-205ENST00000558745 C2CD4AQ8NCU7 369 aaPredicted RBP13.42□□□□□ -0.26
TSPAN3-205ENST00000558745 OR5K2Q8NHB8 316 aa13.42□□□□□ -0.26
TSPAN3-205ENST00000558745 SNIP1Q8TAD8 396 aaKnown RBP13.42□□□□□ -0.26
TSPAN3-205ENST00000558745 FBXO25Q8TCJ0 367 aa13.42□□□□□ -0.26
TSPAN3-205ENST00000558745 CALML6Q8TD86 181 aa13.42□□□□□ -0.26
TSPAN3-205ENST00000558745 ELMO2Q96JJ3 720 aa13.42□□□□□ -0.26
TSPAN3-205ENST00000558745 FAM167BQ9BTA0 163 aa13.42□□□□□ -0.26
TSPAN3-205ENST00000558745 NAT9Q9BTE0 207 aa13.42□□□□□ -0.26
TSPAN3-205ENST00000558745 RAB33BQ9H082 229 aa13.42□□□□□ -0.26
TSPAN3-205ENST00000558745 KLHL25Q9H0H3 589 aa13.42□□□□□ -0.26
TSPAN3-205ENST00000558745 TRIT1Q9H3H1 467 aaKnown RBP13.42□□□□□ -0.26
TSPAN3-205ENST00000558745 TFB2MQ9H5Q4 396 aaKnown RBP13.42□□□□□ -0.26
TSPAN3-205ENST00000558745 SPHK1Q9NYA1 384 aa13.42□□□□□ -0.26
TSPAN3-205ENST00000558745 GSAPA4D1B5 854 aa13.41□□□□□ -0.26
TSPAN3-205ENST00000558745 E5RI56 91 aa13.41□□□□□ -0.26
TSPAN3-205ENST00000558745 PVRP15151 417 aa13.41□□□□□ -0.26
TSPAN3-205ENST00000558745 SSTR1P30872 391 aa13.41□□□□□ -0.26
TSPAN3-205ENST00000558745 PCBP4P57723 403 aaKnown RBP13.41□□□□□ -0.26
TSPAN3-205ENST00000558745 MC2RQ01718 297 aa13.41□□□□□ -0.26
TSPAN3-205ENST00000558745 FOXM1Q08050 763 aa13.41□□□□□ -0.26
TSPAN3-205ENST00000558745 SRSF6Q13247 344 aaKnown RBP13.41□□□□□ -0.26
TSPAN3-205ENST00000558745 PLEKHS1Q5SXH7 462 aa13.41□□□□□ -0.26
TSPAN3-205ENST00000558745 RBM20Q5T481 1227 aaKnown RBP13.41□□□□□ -0.26
TSPAN3-205ENST00000558745 ARMC6Q6NXE6 501 aa13.41□□□□□ -0.26
TSPAN3-205ENST00000558745 C8orf74Q6P047 294 aa13.41□□□□□ -0.26
TSPAN3-205ENST00000558745 TRIM73Q86UV7 250 aa13.41□□□□□ -0.26
TSPAN3-205ENST00000558745 FAM20CQ8IXL6 584 aa13.41□□□□□ -0.26
TSPAN3-205ENST00000558745 ZBTB2Q8N680 514 aa13.41□□□□□ -0.26
TSPAN3-205ENST00000558745 KIF18AQ8NI77 898 aa13.41□□□□□ -0.26
TSPAN3-205ENST00000558745 KLHL6Q8WZ60 621 aa13.41□□□□□ -0.26
TSPAN3-205ENST00000558745 TAAR9Q96RI9 348 aa13.41□□□□□ -0.26
TSPAN3-205ENST00000558745 GPR21Q99679 349 aa13.41□□□□□ -0.26
TSPAN3-205ENST00000558745 AARSD1Q9BTE6 412 aaKnown RBP13.41□□□□□ -0.26
TSPAN3-205ENST00000558745 HELZ2Q9BYK8 2649 aaKnown RBP13.41□□□□□ -0.26
TSPAN3-205ENST00000558745 SMYD2Q9NRG4 433 aa13.41□□□□□ -0.26
TSPAN3-205ENST00000558745 DMGDHQ9UI17 866 aaKnown RBP13.41□□□□□ -0.26
TSPAN3-205ENST00000558745 PSAT1Q9Y617 370 aa13.41□□□□□ -0.26
TSPAN3-205ENST00000558745 LOC400499M0QZD8 3231 aa13.41□□□□□ -0.26
TSPAN3-205ENST00000558745 SLC9B1P1A6NJY1 282 aa13.4□□□□□ -0.26
TSPAN3-205ENST00000558745 H3BMM5 538 aa13.4□□□□□ -0.26
TSPAN3-205ENST00000558745 NVLO15381 856 aaKnown RBP13.4□□□□□ -0.26
TSPAN3-205ENST00000558745 KLK10O43240 276 aa13.4□□□□□ -0.26
TSPAN3-205ENST00000558745 C1orf105O95561 183 aa13.4□□□□□ -0.26
TSPAN3-205ENST00000558745 ANKRD34CP0C6C1 535 aa13.4□□□□□ -0.26
TSPAN3-205ENST00000558745 FOLR1P15328 257 aa13.4□□□□□ -0.26
TSPAN3-205ENST00000558745 PRDX3P30048 256 aaKnown RBP13.4□□□□□ -0.26
TSPAN3-205ENST00000558745 GUCY2DQ02846 1103 aa13.4□□□□□ -0.26
TSPAN3-205ENST00000558745 PRKAA1Q13131 559 aa13.4□□□□□ -0.26
TSPAN3-205ENST00000558745 GBX1Q14549 363 aa13.4□□□□□ -0.26
TSPAN3-205ENST00000558745 KLHL38Q2WGJ6 581 aa13.4□□□□□ -0.26
TSPAN3-205ENST00000558745 KLHL35Q6PF15 583 aa13.4□□□□□ -0.26
TSPAN3-205ENST00000558745 PRSS42Q7Z5A4 293 aa13.4□□□□□ -0.26
TSPAN3-205ENST00000558745 TAX1BP1Q86VP1 789 aa13.4□□□□□ -0.26
TSPAN3-205ENST00000558745 CCDC25Q86WR0 208 aa13.4□□□□□ -0.26
TSPAN3-205ENST00000558745 CNTN4Q8IWV2 1026 aa13.4□□□□□ -0.26
TSPAN3-205ENST00000558745 LMNTD2Q8IXW0 634 aa13.4□□□□□ -0.26
TSPAN3-205ENST00000558745 MMGT1Q8N4V1 131 aa13.4□□□□□ -0.26
TSPAN3-205ENST00000558745 PYROXD1Q8WU10 500 aa13.4□□□□□ -0.26
TSPAN3-205ENST00000558745 LRRC39Q96DD0 335 aa13.4□□□□□ -0.26
TSPAN3-205ENST00000558745 RAB17Q9H0T7 212 aa13.4□□□□□ -0.26
TSPAN3-205ENST00000558745 CCDC68Q9H2F9 335 aa13.4□□□□□ -0.26
TSPAN3-205ENST00000558745 ZNF768Q9H5H4 540 aaKnown RBP13.4□□□□□ -0.26
TSPAN3-205ENST00000558745 LATS2Q9NRM7 1088 aa13.4□□□□□ -0.26
TSPAN3-205ENST00000558745 SIDT1Q9NXL6 827 aaKnown RBP13.4□□□□□ -0.26
TSPAN3-205ENST00000558745 ACTR10Q9NZ32 417 aa13.4□□□□□ -0.26
TSPAN3-205ENST00000558745 VPS9D1Q9Y2B5 631 aa13.4□□□□□ -0.26
TSPAN3-205ENST00000558745 PCDHGA7Q9Y5G6 932 aa13.4□□□□□ -0.26
TSPAN3-205ENST00000558745 ADAMTS20P59510 1910 aa13.4□□□□□ -0.26
TSPAN3-205ENST00000558745 AHCTF1Q8WYP5 2266 aa13.4□□□□□ -0.26
TSPAN3-205ENST00000558745 ITPR1Q14643 2758 aa13.4□□□□□ -0.26
TSPAN3-205ENST00000558745 CTAGE15A4D2H0 777 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 CXorf49A8MYA2 514 aaPredicted RBP13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 B4E171 279 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 KIF2AO00139 706 aaPredicted RBP13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 KPNA5O15131 536 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 TUBB4AP04350 444 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 EBLN1P0CF75 366 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 CTAGE8P0CG41 777 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 ST6GAL1P15907 406 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 NELFEP18615 380 aaKnown RBP13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 CDH3P22223 829 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 MCM3P25205 808 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 PEBP1P30086 187 aaKnown RBP13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 TSPAN7P41732 249 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 CDKN2DP55273 166 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 GPX6P59796 221 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 CLN3Q13286 438 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 KYNUQ16719 465 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 COL28A1Q2UY09 1125 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 CYHR1Q6ZMK1 362 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 CTAGE6Q86UF2 777 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 CTAGE4Q8IX94 777 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 SPACA3Q8IXA5 215 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 PALM2Q8IXS6 379 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 CPNE9Q8IYJ1 553 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 LINC01555Q8NAE3 123 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms