RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 LCN9Q8WX39 176 aa16.95■□□□□ 0.3
TPM1-214ENST00000558544 NCSTNQ92542 709 aa16.95■□□□□ 0.3
TPM1-214ENST00000558544 DHRS4Q9BTZ2 278 aa16.95■□□□□ 0.3
TPM1-214ENST00000558544 EPB41L1Q9H4G0 881 aa16.95■□□□□ 0.3
TPM1-214ENST00000558544 SYTL2Q9HCH5 934 aa16.95■□□□□ 0.3
TPM1-214ENST00000558544 ZNF180Q9UJW8 692 aa16.95■□□□□ 0.3
TPM1-214ENST00000558544 ADAMTS6Q9UKP5 1117 aa16.95■□□□□ 0.3
TPM1-214ENST00000558544 ICKQ9UPZ9 632 aa16.95■□□□□ 0.3
TPM1-214ENST00000558544 PCM1Q15154 2024 aa16.95■□□□□ 0.3
TPM1-214ENST00000558544 ADAMTS20P59510 1910 aa16.94■□□□□ 0.3
TPM1-214ENST00000558544 TCEA3O75764 348 aa16.94■□□□□ 0.3
TPM1-214ENST00000558544 KRT38O76015 456 aa16.94■□□□□ 0.3
TPM1-214ENST00000558544 WISP3O95389 354 aaPredicted RBP16.94■□□□□ 0.3
TPM1-214ENST00000558544 CPNE6O95741 557 aa16.94■□□□□ 0.3
TPM1-214ENST00000558544 MT-CO3P00414 261 aa16.94■□□□□ 0.3
TPM1-214ENST00000558544 CATP04040 527 aaKnown RBP16.94■□□□□ 0.3
TPM1-214ENST00000558544 GMPRP36959 345 aa16.94■□□□□ 0.3
TPM1-214ENST00000558544 CCNFP41002 786 aa16.94■□□□□ 0.3
TPM1-214ENST00000558544 PDX1P52945 283 aa16.94■□□□□ 0.3
TPM1-214ENST00000558544 CFHR1Q03591 330 aa16.94■□□□□ 0.3
TPM1-214ENST00000558544 FOXC1Q12948 553 aa16.94■□□□□ 0.3
TPM1-214ENST00000558544 GRB7Q14451 532 aa16.94■□□□□ 0.3
TPM1-214ENST00000558544 CDCP2Q5VXM1 449 aa16.94■□□□□ 0.3
TPM1-214ENST00000558544 TTC23LQ6PF05 361 aa16.94■□□□□ 0.3
TPM1-214ENST00000558544 RAPH1Q70E73 1250 aa16.94■□□□□ 0.3
TPM1-214ENST00000558544 UBE2R2Q712K3 238 aaPredicted RBP16.94■□□□□ 0.3
TPM1-214ENST00000558544 RAB44Q7Z6P3 723 aaPredicted RBP16.94■□□□□ 0.3
TPM1-214ENST00000558544 NKAPQ8N5F7 415 aaKnown RBP16.94■□□□□ 0.3
TPM1-214ENST00000558544 ASB11Q8WXH4 323 aa16.94■□□□□ 0.3
TPM1-214ENST00000558544 RAD51AP1Q96B01 352 aa16.94■□□□□ 0.3
TPM1-214ENST00000558544 CCDC77Q9BR77 488 aa16.94■□□□□ 0.3
TPM1-214ENST00000558544 UNKQ9C0B0 810 aaKnown RBP16.94■□□□□ 0.3
TPM1-214ENST00000558544 SRMSQ9H3Y6 488 aa16.94■□□□□ 0.3
TPM1-214ENST00000558544 TFB2MQ9H5Q4 396 aaKnown RBP16.94■□□□□ 0.3
TPM1-214ENST00000558544 SNX15Q9NRS6 342 aa16.94■□□□□ 0.3
TPM1-214ENST00000558544 TMEM9Q9P0T7 183 aa16.94■□□□□ 0.3
TPM1-214ENST00000558544 OR6C74A6NCV1 312 aa16.93■□□□□ 0.3
TPM1-214ENST00000558544 TRIM49D1C9J1S8 452 aa16.93■□□□□ 0.3
TPM1-214ENST00000558544 KDM1AO60341 852 aa16.93■□□□□ 0.3
TPM1-214ENST00000558544 MPSTP25325 297 aa16.93■□□□□ 0.3
TPM1-214ENST00000558544 CNTFP26441 200 aa16.93■□□□□ 0.3
TPM1-214ENST00000558544 SERPINB8P50452 374 aa16.93■□□□□ 0.3
TPM1-214ENST00000558544 PPP1CAP62136 330 aa16.93■□□□□ 0.3
TPM1-214ENST00000558544 ADGRD1Q6QNK2 874 aa16.93■□□□□ 0.3
TPM1-214ENST00000558544 AMIGO1Q86WK6 493 aa16.93■□□□□ 0.3
TPM1-214ENST00000558544 OOSP2Q86WS3 158 aa16.93■□□□□ 0.3
TPM1-214ENST00000558544 MREGQ8N565 214 aa16.93■□□□□ 0.3
TPM1-214ENST00000558544 OR2W6PQ8NHA6 318 aa16.93■□□□□ 0.3
TPM1-214ENST00000558544 MAGEC3Q8TD91 643 aa16.93■□□□□ 0.3
TPM1-214ENST00000558544 IL17FQ96PD4 163 aa16.93■□□□□ 0.3
TPM1-214ENST00000558544 MENTQ9BUN1 341 aa16.93■□□□□ 0.3
TPM1-214ENST00000558544 PSMC3IPQ9P2W1 217 aaPredicted RBP16.93■□□□□ 0.3
TPM1-214ENST00000558544 FETUBQ9UGM5 382 aa16.93■□□□□ 0.3
TPM1-214ENST00000558544 IKZF3Q9UKT9 509 aa16.93■□□□□ 0.3
TPM1-214ENST00000558544 CLCA2Q9UQC9 943 aa16.93■□□□□ 0.3
TPM1-214ENST00000558544 FAM149AA5PLN7 773 aa16.92■□□□□ 0.3
TPM1-214ENST00000558544 FAM221BA6H8Z2 402 aa16.92■□□□□ 0.3
TPM1-214ENST00000558544 OR5K3A6NET4 321 aa16.92■□□□□ 0.3
TPM1-214ENST00000558544 SMIM23A6NLE4 172 aa16.92■□□□□ 0.3
TPM1-214ENST00000558544 GFYI3L273 518 aa16.92■□□□□ 0.3
TPM1-214ENST00000558544 HYAL3O43820 417 aaPredicted RBP16.92■□□□□ 0.3
TPM1-214ENST00000558544 ZBTB14O43829 449 aa16.92■□□□□ 0.3
TPM1-214ENST00000558544 SYF2O95926 243 aaKnown RBP16.92■□□□□ 0.3
TPM1-214ENST00000558544 TOP3BO95985 862 aaKnown RBP16.92■□□□□ 0.3
TPM1-214ENST00000558544 ALDOAP04075 364 aaKnown RBP16.92■□□□□ 0.3
TPM1-214ENST00000558544 C8GP07360 202 aa16.92■□□□□ 0.3
TPM1-214ENST00000558544 SLC35E2BP0CK96 405 aa16.92■□□□□ 0.3
TPM1-214ENST00000558544 CCDC166P0CW27 439 aa16.92■□□□□ 0.3
TPM1-214ENST00000558544 HOXB3P14651 431 aaPredicted RBP16.92■□□□□ 0.3
TPM1-214ENST00000558544 POLR2CP19387 275 aaPredicted RBP16.92■□□□□ 0.3
TPM1-214ENST00000558544 MAP4P27816 1152 aaKnown RBP16.92■□□□□ 0.3
TPM1-214ENST00000558544 CRABP2P29373 138 aa16.92■□□□□ 0.3
TPM1-214ENST00000558544 PKLRP30613 574 aa16.92■□□□□ 0.3
TPM1-214ENST00000558544 SHMT2P34897 504 aa16.92■□□□□ 0.3
TPM1-214ENST00000558544 SLCO1A2P46721 670 aa16.92■□□□□ 0.3
TPM1-214ENST00000558544 GFERP55789 205 aa16.92■□□□□ 0.3
TPM1-214ENST00000558544 SP140Q13342 867 aa16.92■□□□□ 0.3
TPM1-214ENST00000558544 SQSTM1Q13501 440 aa16.92■□□□□ 0.3
TPM1-214ENST00000558544 IRGCQ6NXR0 463 aa16.92■□□□□ 0.3
TPM1-214ENST00000558544 KLHL35Q6PF15 583 aa16.92■□□□□ 0.3
TPM1-214ENST00000558544 ZNF574Q6ZN55 896 aaPredicted RBP16.92■□□□□ 0.3
TPM1-214ENST00000558544 B3GNT8Q7Z7M8 397 aa16.92■□□□□ 0.3
TPM1-214ENST00000558544 MARCH9Q86YJ5 346 aa16.92■□□□□ 0.3
TPM1-214ENST00000558544 RASGRP3Q8IV61 690 aa16.92■□□□□ 0.3
TPM1-214ENST00000558544 SPATA6LQ8N4H0 392 aa16.92■□□□□ 0.3
TPM1-214ENST00000558544 LMNTD1Q8N9Z9 388 aa16.92■□□□□ 0.3
TPM1-214ENST00000558544 EPS8L3Q8TE67 593 aaKnown RBP16.92■□□□□ 0.3
TPM1-214ENST00000558544 DLG3Q92796 817 aa16.92■□□□□ 0.3
TPM1-214ENST00000558544 PDLIM5Q96HC4 596 aaKnown RBP16.92■□□□□ 0.3
TPM1-214ENST00000558544 DEPDC7Q96QD5 511 aa16.92■□□□□ 0.3
TPM1-214ENST00000558544 HRASLS2Q9NWW9 162 aa16.92■□□□□ 0.3
TPM1-214ENST00000558544 CTNNAL1Q9UBT7 734 aa16.92■□□□□ 0.3
TPM1-214ENST00000558544 KLHL3Q9UH77 587 aa16.92■□□□□ 0.3
TPM1-214ENST00000558544 CACNA1AO00555 2505 aa16.92■□□□□ 0.3
TPM1-214ENST00000558544 NPEPPSL1A6NEC2 478 aa16.91■□□□□ 0.3
TPM1-214ENST00000558544 BTN3A3O00478 584 aa16.91■□□□□ 0.3
TPM1-214ENST00000558544 BTN3A1O00481 513 aa16.91■□□□□ 0.3
TPM1-214ENST00000558544 RASGRF2O14827 1237 aa16.91■□□□□ 0.3
TPM1-214ENST00000558544 CAPN5O15484 640 aaPredicted RBP16.91■□□□□ 0.3
TPM1-214ENST00000558544 CSO75390 466 aaKnown RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms