RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 PUM1Q14671 1186 aaKnown RBP eCLIP3.63□□□□□ -1.83
ATXN3-248ENST00000558190 LAPTM4AQ15012 233 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 CORO6Q6QEF8 472 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 PAMR1Q6UXH9 720 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 SSX6Q7RTT6 188 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 RHBDF1Q96CC6 855 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 ELOVL4Q9GZR5 314 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 POT1Q9NUX5 634 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 TCRBV5S4A2TA0A5A2 114 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 SMIM30A4D0T7 59 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 STK16O75716 305 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 ETV4P43268 484 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 CBLBQ13191 982 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 BATFQ16520 125 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 EIF5AL1Q6IS14 154 aaKnown RBP3.63□□□□□ -1.83
ATXN3-248ENST00000558190 CLP1Q92989 425 aaKnown RBP3.63□□□□□ -1.83
ATXN3-248ENST00000558190 DBNDD1Q9H9R9 158 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 GPN2Q9H9Y4 310 aaPredicted RBP3.63□□□□□ -1.83
ATXN3-248ENST00000558190 TMEM181Q9P2C4 612 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 FETUBQ9UGM5 382 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 CPSF4LA6NMK7 179 aaKnown RBP3.63□□□□□ -1.83
ATXN3-248ENST00000558190 SPATA31C2B4DYI2 1134 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 STX16O14662 325 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 SCAMP3O14828 347 aaKnown RBP3.63□□□□□ -1.83
ATXN3-248ENST00000558190 TP53P04637 393 aaPredicted RBP3.63□□□□□ -1.83
ATXN3-248ENST00000558190 NCS1P62166 190 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 MOB2Q70IA6 237 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 VSIG10LQ86VR7 867 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 PYROXD2Q8N2H3 581 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 C12orf29Q8N999 325 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 BEST4Q8NFU0 473 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 FUZQ9BT04 418 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.63□□□□□ -1.83
ATXN3-248ENST00000558190 ABCG8Q9H221 673 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 CYB5R1Q9UHQ9 305 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 WDR45Q9Y484 360 aa3.63□□□□□ -1.83
ATXN3-248ENST00000558190 GIFP27352 417 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 GIPRP48546 466 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 CTBP2P56545 445 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 GCNT1Q02742 428 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 SREBF2Q12772 1141 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 ZNF674Q2M3X9 581 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.62□□□□□ -1.83
ATXN3-248ENST00000558190 MSANTD2Q6P1R3 559 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 TIPARPQ7Z3E1 657 aaKnown RBP3.62□□□□□ -1.83
ATXN3-248ENST00000558190 METTL4Q8N3J2 472 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 TGIF2Q9GZN2 237 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 PCYT1BQ9Y5K3 369 aaPredicted RBP3.62□□□□□ -1.83
ATXN3-248ENST00000558190 AIPO00170 330 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 ADAMDEC1O15204 470 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 NPHS1O60500 1241 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 SFTPBP07988 381 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 OR1E1P30953 314 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 KCNQ1P51787 676 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 CLCN4P51793 760 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 LINGO2Q7L985 606 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 PLEKHH3Q7Z736 793 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 DPPA2Q7Z7J5 298 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 REPS1Q96D71 796 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 PKP4Q99569 1192 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 MAPKAP1Q9BPZ7 522 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 ATF5Q9Y2D1 282 aaPredicted RBP3.62□□□□□ -1.83
ATXN3-248ENST00000558190 AGAP5A6NIR3 686 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 ARHGEF15O94989 841 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 AHSA1O95433 338 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 DNASE1P24855 282 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 EIF2S3LQ2VIR3 472 aaKnown RBP3.62□□□□□ -1.83
ATXN3-248ENST00000558190 GCNT6Q5T4J0 391 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 PAQR3Q6TCH7 311 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 RNF44Q7L0R7 432 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 RBM23Q86U06 439 aaKnown RBP3.62□□□□□ -1.83
ATXN3-248ENST00000558190 CARM1Q86X55 608 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 CLEC10AQ8IUN9 316 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 ZBTB44Q8NCP5 570 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 SPATA9Q9BWV2 254 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 ITPAQ9BY32 194 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 ZNF408Q9H9D4 720 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 TEX13DA0A0J9YY54 714 aaPredicted RBP3.62□□□□□ -1.83
ATXN3-248ENST00000558190 ITGB3P05106 788 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 PIRTP0C851 137 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 F8A1P23610 371 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 DNAJB2P25686 324 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 ATAD3CQ5T2N8 411 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 SLC30A6Q6NXT4 461 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 SHC3Q92529 594 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 FAM126AQ9BYI3 521 aaPredicted RBP3.62□□□□□ -1.83
ATXN3-248ENST00000558190 MFFQ9GZY8 342 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 SDHAF2Q9NX18 166 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 TNFRSF10DQ9UBN6 386 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 DNMT3LQ9UJW3 386 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 ACSL5Q9ULC5 683 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 ICE1Q9Y2F5 2266 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 WASHC1A8K0Z3 465 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 HBP1O60381 514 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 ANXA8P13928 327 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 NTSP30990 170 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 GTF2BQ00403 316 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 GRB14Q14449 540 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 GPAT3Q53EU6 434 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 GPR158Q5T848 1215 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms