RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 ADRA1DP25100 572 aa13.16□□□□□ -0.3
SNRPA1-204ENST00000558020 FDFT1P37268 417 aa13.16□□□□□ -0.3
SNRPA1-204ENST00000558020 CHAF1BQ13112 559 aa13.16□□□□□ -0.3
SNRPA1-204ENST00000558020 KIR2DS3Q14952 304 aa13.16□□□□□ -0.3
SNRPA1-204ENST00000558020 BRD3Q15059 726 aa13.16□□□□□ -0.3
SNRPA1-204ENST00000558020 ZNF789Q5FWF6 425 aa13.16□□□□□ -0.3
SNRPA1-204ENST00000558020 CPZQ66K79 652 aa13.16□□□□□ -0.3
SNRPA1-204ENST00000558020 TLDC1Q6P9B6 456 aa13.16□□□□□ -0.3
SNRPA1-204ENST00000558020 CLEC18BQ6UXF7 455 aa13.16□□□□□ -0.3
SNRPA1-204ENST00000558020 CDHR3Q6ZTQ4 885 aa13.16□□□□□ -0.3
SNRPA1-204ENST00000558020 C19orf47Q8N9M1 422 aaKnown RBP13.16□□□□□ -0.3
SNRPA1-204ENST00000558020 CLEC18CQ8NCF0 446 aa13.16□□□□□ -0.3
SNRPA1-204ENST00000558020 GALNT11Q8NCW6 608 aa13.16□□□□□ -0.3
SNRPA1-204ENST00000558020 OR5AR1Q8NGP9 310 aa13.16□□□□□ -0.3
SNRPA1-204ENST00000558020 OR6P1Q8NGX9 317 aa13.16□□□□□ -0.3
SNRPA1-204ENST00000558020 OR5K2Q8NHB8 316 aa13.16□□□□□ -0.3
SNRPA1-204ENST00000558020 CPT1CQ8TCG5 803 aa13.16□□□□□ -0.3
SNRPA1-204ENST00000558020 ADAMTS17Q8TE56 1095 aa13.16□□□□□ -0.3
SNRPA1-204ENST00000558020 DENND1AQ8TEH3 1009 aa13.16□□□□□ -0.3
SNRPA1-204ENST00000558020 ASZ1Q8WWH4 475 aa13.16□□□□□ -0.3
SNRPA1-204ENST00000558020 SLC22A18Q96BI1 424 aa13.16□□□□□ -0.3
SNRPA1-204ENST00000558020 SGSM3Q96HU1 749 aa13.16□□□□□ -0.3
SNRPA1-204ENST00000558020 HES6Q96HZ4 224 aa13.16□□□□□ -0.3
SNRPA1-204ENST00000558020 FER1L6-AS2Q96M78 137 aa13.16□□□□□ -0.3
SNRPA1-204ENST00000558020 AP1M1Q9BXS5 423 aa13.16□□□□□ -0.3
SNRPA1-204ENST00000558020 KLHL25Q9H0H3 589 aa13.16□□□□□ -0.3
SNRPA1-204ENST00000558020 LRRC4CQ9HCJ2 640 aa13.16□□□□□ -0.3
SNRPA1-204ENST00000558020 TXLNGQ9NUQ3 528 aa13.16□□□□□ -0.3
SNRPA1-204ENST00000558020 PIH1D1Q9NWS0 290 aaKnown RBP13.16□□□□□ -0.3
SNRPA1-204ENST00000558020 ANAPC5Q9UJX4 755 aa13.16□□□□□ -0.3
SNRPA1-204ENST00000558020 RIMKLBQ9ULI2 386 aa13.16□□□□□ -0.3
SNRPA1-204ENST00000558020 PACSIN2Q9UNF0 486 aaPredicted RBP13.16□□□□□ -0.3
SNRPA1-204ENST00000558020 ICKQ9UPZ9 632 aa13.16□□□□□ -0.3
SNRPA1-204ENST00000558020 ZNF148Q9UQR1 794 aa13.16□□□□□ -0.3
SNRPA1-204ENST00000558020 RP1L1Q8IWN7 2480 aaPredicted RBP13.16□□□□□ -0.3
SNRPA1-204ENST00000558020 ISM1B1AKI9 464 aa13.15□□□□□ -0.3
SNRPA1-204ENST00000558020 ZNF185O15231 689 aa13.15□□□□□ -0.3
SNRPA1-204ENST00000558020 CEACAM4O75871 244 aa13.15□□□□□ -0.3
SNRPA1-204ENST00000558020 PDGFAP04085 211 aa13.15□□□□□ -0.3
SNRPA1-204ENST00000558020 CHRM5P08912 532 aaPredicted RBP13.15□□□□□ -0.3
SNRPA1-204ENST00000558020 PRSS56P0CW18 603 aa13.15□□□□□ -0.3
SNRPA1-204ENST00000558020 PVRP15151 417 aa13.15□□□□□ -0.3
SNRPA1-204ENST00000558020 UGT2B7P16662 529 aa13.15□□□□□ -0.3
SNRPA1-204ENST00000558020 ACADLP28330 430 aa13.15□□□□□ -0.3
SNRPA1-204ENST00000558020 GDF10P55107 478 aa13.15□□□□□ -0.3
SNRPA1-204ENST00000558020 PRAMEP78395 509 aa13.15□□□□□ -0.3
SNRPA1-204ENST00000558020 DCDP81605 110 aaKnown RBP13.15□□□□□ -0.3
SNRPA1-204ENST00000558020 SSPNQ14714 243 aa13.15□□□□□ -0.3
SNRPA1-204ENST00000558020 PTCHD3Q3KNS1 767 aa13.15□□□□□ -0.3
SNRPA1-204ENST00000558020 CCDC38Q502W7 563 aa13.15□□□□□ -0.3
SNRPA1-204ENST00000558020 FASTKD1Q53R41 847 aaKnown RBP13.15□□□□□ -0.3
SNRPA1-204ENST00000558020 DNAJC21Q5F1R6 531 aaKnown RBP13.15□□□□□ -0.3
SNRPA1-204ENST00000558020 AARS2Q5JTZ9 985 aaKnown RBP13.15□□□□□ -0.3
SNRPA1-204ENST00000558020 SEL1L2Q5TEA6 688 aa13.15□□□□□ -0.3
SNRPA1-204ENST00000558020 MLIPQ5VWP3 458 aa13.15□□□□□ -0.3
SNRPA1-204ENST00000558020 LCN10Q6JVE6 187 aa13.15□□□□□ -0.3
SNRPA1-204ENST00000558020 TTC23LQ6PF05 361 aa13.15□□□□□ -0.3
SNRPA1-204ENST00000558020 AFTPHQ6ULP2 937 aa13.15□□□□□ -0.3
SNRPA1-204ENST00000558020 TAB3Q8N5C8 712 aaPredicted RBP13.15□□□□□ -0.3
SNRPA1-204ENST00000558020 OR52K1Q8NGK4 314 aa13.15□□□□□ -0.3
SNRPA1-204ENST00000558020 OR4L1Q8NH43 312 aa13.15□□□□□ -0.3
SNRPA1-204ENST00000558020 GSDMBQ8TAX9 411 aa13.15□□□□□ -0.3
SNRPA1-204ENST00000558020 PROKR1Q8TCW9 393 aa13.15□□□□□ -0.3
SNRPA1-204ENST00000558020 HDAC10Q969S8 669 aa13.15□□□□□ -0.3
SNRPA1-204ENST00000558020 OR2A14Q96R47 310 aa13.15□□□□□ -0.3
SNRPA1-204ENST00000558020 RANBP9Q96S59 729 aa13.15□□□□□ -0.3
SNRPA1-204ENST00000558020 NDC1Q9BTX1 674 aa13.15□□□□□ -0.3
SNRPA1-204ENST00000558020 SLAMF7Q9NQ25 335 aa13.15□□□□□ -0.3
SNRPA1-204ENST00000558020 IRAK4Q9NWZ3 460 aa13.15□□□□□ -0.3
SNRPA1-204ENST00000558020 GPR83Q9NYM4 423 aa13.15□□□□□ -0.3
SNRPA1-204ENST00000558020 IMPACTQ9P2X3 320 aa13.15□□□□□ -0.3
SNRPA1-204ENST00000558020 SRPK3Q9UPE1 567 aa13.15□□□□□ -0.3
SNRPA1-204ENST00000558020 R3HDM2Q9Y2K5 976 aaKnown RBP13.15□□□□□ -0.3
SNRPA1-204ENST00000558020 DOPEY2Q9Y3R5 2298 aa13.14□□□□□ -0.31
SNRPA1-204ENST00000558020 A0A0J9YY10 115 aa13.14□□□□□ -0.31
SNRPA1-204ENST00000558020 SLC5A10A0PJK1 596 aa13.14□□□□□ -0.31
SNRPA1-204ENST00000558020 A6NL46 340 aa13.14□□□□□ -0.31
SNRPA1-204ENST00000558020 GOLGA6L6A8MZA4 724 aa13.14□□□□□ -0.31
SNRPA1-204ENST00000558020 BHMG1C9JSJ3 638 aaPredicted RBP13.14□□□□□ -0.31
SNRPA1-204ENST00000558020 SUN1O94901 812 aa13.14□□□□□ -0.31
SNRPA1-204ENST00000558020 IFNB1P01574 187 aa13.14□□□□□ -0.31
SNRPA1-204ENST00000558020 ALPPP05187 535 aa13.14□□□□□ -0.31
SNRPA1-204ENST00000558020 APOA4P06727 396 aa13.14□□□□□ -0.31
SNRPA1-204ENST00000558020 CAPN1P07384 714 aa13.14□□□□□ -0.31
SNRPA1-204ENST00000558020 FOXN2P32314 431 aa13.14□□□□□ -0.31
SNRPA1-204ENST00000558020 SLC5A12Q1EHB4 618 aa13.14□□□□□ -0.31
SNRPA1-204ENST00000558020 TSTD2Q5T7W7 516 aa13.14□□□□□ -0.31
SNRPA1-204ENST00000558020 RHBDD2Q6NTF9 364 aa13.14□□□□□ -0.31
SNRPA1-204ENST00000558020 FAM198BQ6UWH4 519 aa13.14□□□□□ -0.31
SNRPA1-204ENST00000558020 CCDC89Q8N998 374 aa13.14□□□□□ -0.31
SNRPA1-204ENST00000558020 GLIS1Q8NBF1 620 aa13.14□□□□□ -0.31
SNRPA1-204ENST00000558020 CLEC1AQ8NC01 280 aa13.14□□□□□ -0.31
SNRPA1-204ENST00000558020 FDCSPQ8NFU4 85 aa13.14□□□□□ -0.31
SNRPA1-204ENST00000558020 PEX13Q92968 403 aa13.14□□□□□ -0.31
SNRPA1-204ENST00000558020 TSGA10Q9BZW7 698 aa13.14□□□□□ -0.31
SNRPA1-204ENST00000558020 RBSNQ9H1K0 784 aa13.14□□□□□ -0.31
SNRPA1-204ENST00000558020 ETNK1Q9HBU6 452 aa13.14□□□□□ -0.31
SNRPA1-204ENST00000558020 INTS7Q9NVH2 962 aaKnown RBP13.14□□□□□ -0.31
SNRPA1-204ENST00000558020 C5AR2Q9P296 337 aa13.14□□□□□ -0.31
SNRPA1-204ENST00000558020 IFT80Q9P2H3 777 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms