RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 OR6C74A6NCV1 312 aa24.81■■□□□ 1.56
SMAD6-202ENST00000557916 OR5K3A6NET4 321 aa24.81■■□□□ 1.56
SMAD6-202ENST00000557916 PSIP1O75475 530 aaKnown RBP24.81■■□□□ 1.56
SMAD6-202ENST00000557916 ABHD2P08910 425 aa24.81■■□□□ 1.56
SMAD6-202ENST00000557916 CCKBRP32239 447 aa24.81■■□□□ 1.56
SMAD6-202ENST00000557916 BDKRB1P46663 353 aa24.81■■□□□ 1.56
SMAD6-202ENST00000557916 IL2P60568 153 aa24.81■■□□□ 1.56
SMAD6-202ENST00000557916 UAP1Q16222 522 aaPredicted RBP24.81■■□□□ 1.56
SMAD6-202ENST00000557916 PHF19Q5T6S3 580 aa24.81■■□□□ 1.56
SMAD6-202ENST00000557916 WDR93Q6P2C0 686 aa24.81■■□□□ 1.56
SMAD6-202ENST00000557916 AMIGO1Q86WK6 493 aa24.81■■□□□ 1.56
SMAD6-202ENST00000557916 MAGEC3Q8TD91 643 aa24.81■■□□□ 1.56
SMAD6-202ENST00000557916 RAD51AP1Q96B01 352 aa24.81■■□□□ 1.56
SMAD6-202ENST00000557916 LINGO1Q96FE5 620 aa24.81■■□□□ 1.56
SMAD6-202ENST00000557916 CAB39LQ9H9S4 337 aa24.81■■□□□ 1.56
SMAD6-202ENST00000557916 EPHA6Q9UF33 1036 aa24.81■■□□□ 1.56
SMAD6-202ENST00000557916 ANGPTL2Q9UKU9 493 aa24.81■■□□□ 1.56
SMAD6-202ENST00000557916 PLAGL1Q9UM63 463 aa24.81■■□□□ 1.56
SMAD6-202ENST00000557916 ICKQ9UPZ9 632 aa24.81■■□□□ 1.56
SMAD6-202ENST00000557916 CAPN5O15484 640 aaPredicted RBP24.8■■□□□ 1.56
SMAD6-202ENST00000557916 GFERP55789 205 aa24.8■■□□□ 1.56
SMAD6-202ENST00000557916 SHC2P98077 582 aa24.8■■□□□ 1.56
SMAD6-202ENST00000557916 ZNF460Q14592 562 aa24.8■■□□□ 1.56
SMAD6-202ENST00000557916 USP10Q14694 798 aaKnown RBP24.8■■□□□ 1.56
SMAD6-202ENST00000557916 ARMC6Q6NXE6 501 aa24.8■■□□□ 1.56
SMAD6-202ENST00000557916 IRGCQ6NXR0 463 aa24.8■■□□□ 1.56
SMAD6-202ENST00000557916 CEP97Q8IW35 865 aa24.8■■□□□ 1.56
SMAD6-202ENST00000557916 MYO1HQ8N1T3 1032 aa24.8■■□□□ 1.56
SMAD6-202ENST00000557916 ASB11Q8WXH4 323 aa24.8■■□□□ 1.56
SMAD6-202ENST00000557916 TSPAN17Q96FV3 270 aa24.8■■□□□ 1.56
SMAD6-202ENST00000557916 CCDC74BQ96LY2 380 aa24.8■■□□□ 1.56
SMAD6-202ENST00000557916 TGM7Q96PF1 710 aa24.8■■□□□ 1.56
SMAD6-202ENST00000557916 RAB33BQ9H082 229 aa24.8■■□□□ 1.56
SMAD6-202ENST00000557916 PDP2Q9P2J9 529 aa24.8■■□□□ 1.56
SMAD6-202ENST00000557916 KLHL3Q9UH77 587 aa24.8■■□□□ 1.56
SMAD6-202ENST00000557916 CIDEBQ9UHD4 219 aa24.8■■□□□ 1.56
SMAD6-202ENST00000557916 MN1Q10571 1320 aaPredicted RBP24.8■■□□□ 1.56
SMAD6-202ENST00000557916 KNTC1P50748 2209 aa24.79■■□□□ 1.56
SMAD6-202ENST00000557916 CATP04040 527 aaKnown RBP24.79■■□□□ 1.56
SMAD6-202ENST00000557916 ITGA2BP08514 1039 aa24.79■■□□□ 1.56
SMAD6-202ENST00000557916 THRAP10827 490 aa24.79■■□□□ 1.56
SMAD6-202ENST00000557916 POLR2CP19387 275 aaPredicted RBP24.79■■□□□ 1.56
SMAD6-202ENST00000557916 SHMT2P34897 504 aa24.79■■□□□ 1.56
SMAD6-202ENST00000557916 GRB7Q14451 532 aa24.79■■□□□ 1.56
SMAD6-202ENST00000557916 SNAP47Q5SQN1 464 aa24.79■■□□□ 1.56
SMAD6-202ENST00000557916 ZDHHC12Q96GR4 267 aa24.79■■□□□ 1.56
SMAD6-202ENST00000557916 STRADBQ9C0K7 418 aa24.79■■□□□ 1.56
SMAD6-202ENST00000557916 POPDC3Q9HBV1 291 aa24.79■■□□□ 1.56
SMAD6-202ENST00000557916 SYTL2Q9HCH5 934 aa24.79■■□□□ 1.56
SMAD6-202ENST00000557916 MSRB2Q9Y3D2 182 aa24.79■■□□□ 1.56
SMAD6-202ENST00000557916 ARHGEF33A8MVX0 844 aa24.78■■□□□ 1.56
SMAD6-202ENST00000557916 BTN3A3O00478 584 aa24.78■■□□□ 1.56
SMAD6-202ENST00000557916 TSPAN12O95859 305 aa24.78■■□□□ 1.56
SMAD6-202ENST00000557916 C9P02748 559 aa24.78■■□□□ 1.56
SMAD6-202ENST00000557916 ZNF37AP17032 561 aaPredicted RBP24.78■■□□□ 1.56
SMAD6-202ENST00000557916 PRKAA1Q13131 559 aa24.78■■□□□ 1.56
SMAD6-202ENST00000557916 TRA2AQ13595 282 aaKnown RBP eCLIP24.78■■□□□ 1.56
SMAD6-202ENST00000557916 SLC29A2Q14542 456 aa24.78■■□□□ 1.56
SMAD6-202ENST00000557916 CCSMST1Q4G0I0 132 aa24.78■■□□□ 1.56
SMAD6-202ENST00000557916 TMEM207Q6UWW9 146 aa24.78■■□□□ 1.56
SMAD6-202ENST00000557916 SLC44A1Q8WWI5 657 aa24.78■■□□□ 1.56
SMAD6-202ENST00000557916 GPAMQ9HCL2 828 aa24.78■■□□□ 1.56
SMAD6-202ENST00000557916 IKBKGQ9Y6K9 419 aa24.78■■□□□ 1.56
SMAD6-202ENST00000557916 A8MU76 341 aa24.78■■□□□ 1.56
SMAD6-202ENST00000557916 POC1B-GALNT4F8VUJ3 575 aa24.78■■□□□ 1.56
SMAD6-202ENST00000557916 GFYI3L273 518 aa24.78■■□□□ 1.56
SMAD6-202ENST00000557916 BTN3A1O00481 513 aa24.78■■□□□ 1.56
SMAD6-202ENST00000557916 ZBTB14O43829 449 aa24.78■■□□□ 1.56
SMAD6-202ENST00000557916 INHBAP08476 426 aa24.78■■□□□ 1.56
SMAD6-202ENST00000557916 STMN1P16949 149 aa24.78■■□□□ 1.56
SMAD6-202ENST00000557916 MSH2P43246 934 aa24.78■■□□□ 1.56
SMAD6-202ENST00000557916 RAB28P51157 221 aa24.78■■□□□ 1.56
SMAD6-202ENST00000557916 PPP1CAP62136 330 aa24.78■■□□□ 1.56
SMAD6-202ENST00000557916 CAMK2BQ13554 666 aa24.78■■□□□ 1.56
SMAD6-202ENST00000557916 ADGRF3Q8IZF5 1079 aa24.78■■□□□ 1.56
SMAD6-202ENST00000557916 NKAPQ8N5F7 415 aaKnown RBP24.78■■□□□ 1.56
SMAD6-202ENST00000557916 RCBTB1Q8NDN9 531 aa24.78■■□□□ 1.56
SMAD6-202ENST00000557916 LIN37Q96GY3 246 aaPredicted RBP24.78■■□□□ 1.56
SMAD6-202ENST00000557916 PAFAH2Q99487 392 aa24.78■■□□□ 1.56
SMAD6-202ENST00000557916 MENTQ9BUN1 341 aa24.78■■□□□ 1.56
SMAD6-202ENST00000557916 PARD6BQ9BYG5 372 aa24.78■■□□□ 1.56
SMAD6-202ENST00000557916 EPB41L4BQ9H329 900 aa24.78■■□□□ 1.56
SMAD6-202ENST00000557916 OR6C2Q9NZP2 312 aa24.78■■□□□ 1.56
SMAD6-202ENST00000557916 EXOC1LA0A1B0GW35 172 aa24.77■■□□□ 1.56
SMAD6-202ENST00000557916 RASGRF2O14827 1237 aa24.77■■□□□ 1.56
SMAD6-202ENST00000557916 MAP4P27816 1152 aaKnown RBP24.77■■□□□ 1.56
SMAD6-202ENST00000557916 PKLRP30613 574 aa24.77■■□□□ 1.56
SMAD6-202ENST00000557916 EEF1AKMT2Q5JPI9 291 aaKnown RBP24.77■■□□□ 1.56
SMAD6-202ENST00000557916 FAM92BQ6ZTR7 304 aa24.77■■□□□ 1.56
SMAD6-202ENST00000557916 UBE2R2Q712K3 238 aaPredicted RBP24.77■■□□□ 1.56
SMAD6-202ENST00000557916 RASGRP3Q8IV61 690 aa24.77■■□□□ 1.56
SMAD6-202ENST00000557916 PDLIM5Q96HC4 596 aaKnown RBP24.77■■□□□ 1.56
SMAD6-202ENST00000557916 IL17FQ96PD4 163 aa24.77■■□□□ 1.56
SMAD6-202ENST00000557916 CCDC187A0A096LP49 1063 aa24.76■■□□□ 1.55
SMAD6-202ENST00000557916 GSAPA4D1B5 854 aa24.76■■□□□ 1.55
SMAD6-202ENST00000557916 KRT87PA6NCN2 255 aa24.76■■□□□ 1.55
SMAD6-202ENST00000557916 AGRPO00253 132 aa24.76■■□□□ 1.55
SMAD6-202ENST00000557916 MATN2O00339 956 aa24.76■■□□□ 1.55
SMAD6-202ENST00000557916 PHGDHO43175 533 aaKnown RBP24.76■■□□□ 1.55
SMAD6-202ENST00000557916 KIF1CO43896 1103 aaKnown RBP24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms