RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 ARHGAP22Q7Z5H3 698 aa13.3□□□□□ -0.28
SHMT2-234ENST00000557703 BPHLQ86WA6 291 aaPredicted RBP13.3□□□□□ -0.28
SHMT2-234ENST00000557703 RASGRP3Q8IV61 690 aa13.3□□□□□ -0.28
SHMT2-234ENST00000557703 VRK3Q8IV63 474 aa13.3□□□□□ -0.28
SHMT2-234ENST00000557703 MYO1HQ8N1T3 1032 aa13.3□□□□□ -0.28
SHMT2-234ENST00000557703 PPM1NQ8N819 430 aa13.3□□□□□ -0.28
SHMT2-234ENST00000557703 SIDT2Q8NBJ9 832 aaKnown RBP13.3□□□□□ -0.28
SHMT2-234ENST00000557703 AGBL5Q8NDL9 886 aa13.3□□□□□ -0.28
SHMT2-234ENST00000557703 OR52E1Q8NGJ3 308 aa13.3□□□□□ -0.28
SHMT2-234ENST00000557703 MCOLN3Q8TDD5 553 aa13.3□□□□□ -0.28
SHMT2-234ENST00000557703 TBC1D10AQ9BXI6 508 aa13.3□□□□□ -0.28
SHMT2-234ENST00000557703 TRIM54Q9BYV2 358 aa13.3□□□□□ -0.28
SHMT2-234ENST00000557703 TXLNGYQ9BZA5 131 aa13.3□□□□□ -0.28
SHMT2-234ENST00000557703 ANKZF1Q9H8Y5 726 aa13.3□□□□□ -0.28
SHMT2-234ENST00000557703 SMYD2Q9NRG4 433 aa13.3□□□□□ -0.28
SHMT2-234ENST00000557703 HRASLS2Q9NWW9 162 aa13.3□□□□□ -0.28
SHMT2-234ENST00000557703 DKK4Q9UBT3 224 aa13.3□□□□□ -0.28
SHMT2-234ENST00000557703 NOVA2Q9UNW9 492 aaKnown RBP13.3□□□□□ -0.28
SHMT2-234ENST00000557703 CFAP20Q9Y6A4 193 aaKnown RBP13.3□□□□□ -0.28
SHMT2-234ENST00000557703 IGHV5-10-1A0A0J9YXX1 117 aa13.29□□□□□ -0.28
SHMT2-234ENST00000557703 TLCD2A6NGC4 264 aa13.29□□□□□ -0.28
SHMT2-234ENST00000557703 CXorf49A8MYA2 514 aaPredicted RBP13.29□□□□□ -0.28
SHMT2-234ENST00000557703 C2orf74A8MZ97 194 aa13.29□□□□□ -0.28
SHMT2-234ENST00000557703 CAPN5O15484 640 aaPredicted RBP13.29□□□□□ -0.28
SHMT2-234ENST00000557703 KRT38O76015 456 aa13.29□□□□□ -0.28
SHMT2-234ENST00000557703 DXOO77932 396 aaKnown RBP13.29□□□□□ -0.28
SHMT2-234ENST00000557703 ACSL3O95573 720 aa13.29□□□□□ -0.28
SHMT2-234ENST00000557703 INHBAP08476 426 aa13.29□□□□□ -0.28
SHMT2-234ENST00000557703 ITGA2BP08514 1039 aa13.29□□□□□ -0.28
SHMT2-234ENST00000557703 ZNF37AP17032 561 aaPredicted RBP13.29□□□□□ -0.28
SHMT2-234ENST00000557703 CYP2A7P20853 494 aa13.29□□□□□ -0.28
SHMT2-234ENST00000557703 CSTF2P33240 577 aaKnown RBP eCLIP13.29□□□□□ -0.28
SHMT2-234ENST00000557703 CDKN2DP55273 166 aa13.29□□□□□ -0.28
SHMT2-234ENST00000557703 AP1S2P56377 157 aa13.29□□□□□ -0.28
SHMT2-234ENST00000557703 TIAL1Q01085 375 aaKnown RBP eCLIP13.29□□□□□ -0.28
SHMT2-234ENST00000557703 RBM20Q5T481 1227 aaKnown RBP13.29□□□□□ -0.28
SHMT2-234ENST00000557703 ANKS6Q68DC2 871 aa13.29□□□□□ -0.28
SHMT2-234ENST00000557703 PAQR3Q6TCH7 311 aa13.29□□□□□ -0.28
SHMT2-234ENST00000557703 USP53Q70EK8 1073 aa13.29□□□□□ -0.28
SHMT2-234ENST00000557703 OR4E2Q8NGC2 313 aa13.29□□□□□ -0.28
SHMT2-234ENST00000557703 OR5AR1Q8NGP9 310 aa13.29□□□□□ -0.28
SHMT2-234ENST00000557703 OR9A1PQ8NGU1 263 aa13.29□□□□□ -0.28
SHMT2-234ENST00000557703 GIMAP7Q8NHV1 300 aa13.29□□□□□ -0.28
SHMT2-234ENST00000557703 SLC44A1Q8WWI5 657 aa13.29□□□□□ -0.28
SHMT2-234ENST00000557703 ELMO2Q96JJ3 720 aa13.29□□□□□ -0.28
SHMT2-234ENST00000557703 NDNQ99608 321 aa13.29□□□□□ -0.28
SHMT2-234ENST00000557703 SLC12A9Q9BXP2 914 aa13.29□□□□□ -0.28
SHMT2-234ENST00000557703 CHRNA10Q9GZZ6 450 aa13.29□□□□□ -0.28
SHMT2-234ENST00000557703 POLR1BQ9H9Y6 1135 aa13.29□□□□□ -0.28
SHMT2-234ENST00000557703 PARVBQ9HBI1 364 aa13.29□□□□□ -0.28
SHMT2-234ENST00000557703 GPAMQ9HCL2 828 aa13.29□□□□□ -0.28
SHMT2-234ENST00000557703 C1GALT1Q9NS00 363 aa13.29□□□□□ -0.28
SHMT2-234ENST00000557703 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.29□□□□□ -0.28
SHMT2-234ENST00000557703 SLC39A10Q9ULF5 831 aa13.29□□□□□ -0.28
SHMT2-234ENST00000557703 SPEGQ15772 3267 aa13.29□□□□□ -0.28
SHMT2-234ENST00000557703 PABPN1LA6NDY0 278 aaKnown RBP13.28□□□□□ -0.28
SHMT2-234ENST00000557703 B4E171 279 aa13.28□□□□□ -0.28
SHMT2-234ENST00000557703 MYO1CO00159 1063 aa13.28□□□□□ -0.28
SHMT2-234ENST00000557703 RASGRF2O14827 1237 aa13.28□□□□□ -0.28
SHMT2-234ENST00000557703 RIPK2O43353 540 aa13.28□□□□□ -0.28
SHMT2-234ENST00000557703 HIST1H2AGP0C0S8 130 aaPredicted RBP13.28□□□□□ -0.28
SHMT2-234ENST00000557703 MSL3P1P0C860 447 aa13.28□□□□□ -0.28
SHMT2-234ENST00000557703 HIST1H2ADP20671 130 aa13.28□□□□□ -0.28
SHMT2-234ENST00000557703 TSPAN7P41732 249 aa13.28□□□□□ -0.28
SHMT2-234ENST00000557703 PPM1FP49593 454 aaPredicted RBP13.28□□□□□ -0.28
SHMT2-234ENST00000557703 CFHR1Q03591 330 aa13.28□□□□□ -0.28
SHMT2-234ENST00000557703 PRKG2Q13237 762 aa13.28□□□□□ -0.28
SHMT2-234ENST00000557703 CAMK2BQ13554 666 aa13.28□□□□□ -0.28
SHMT2-234ENST00000557703 USP10Q14694 798 aaKnown RBP13.28□□□□□ -0.28
SHMT2-234ENST00000557703 ZKSCAN8Q15776 578 aaPredicted RBP13.28□□□□□ -0.28
SHMT2-234ENST00000557703 CDKL4Q5MAI5 379 aa13.28□□□□□ -0.28
SHMT2-234ENST00000557703 NAPRTQ6XQN6 538 aa13.28□□□□□ -0.28
SHMT2-234ENST00000557703 ZNF574Q6ZN55 896 aaPredicted RBP13.28□□□□□ -0.28
SHMT2-234ENST00000557703 LRRN4CLQ8ND94 238 aa13.28□□□□□ -0.28
SHMT2-234ENST00000557703 OR2L8Q8NGY9 312 aa13.28□□□□□ -0.28
SHMT2-234ENST00000557703 EEF1AKMT1Q8WVE0 214 aa13.28□□□□□ -0.28
SHMT2-234ENST00000557703 KLHL6Q8WZ60 621 aa13.28□□□□□ -0.28
SHMT2-234ENST00000557703 NXPE2Q96DL1 559 aa13.28□□□□□ -0.28
SHMT2-234ENST00000557703 MTBPQ96DY7 904 aa13.28□□□□□ -0.28
SHMT2-234ENST00000557703 HIST1H2AHQ96KK5 128 aa13.28□□□□□ -0.28
SHMT2-234ENST00000557703 HIST1H2AJQ99878 128 aa13.28□□□□□ -0.28
SHMT2-234ENST00000557703 NUDT22Q9BRQ3 303 aa13.28□□□□□ -0.28
SHMT2-234ENST00000557703 ZPBPQ9BS86 351 aa13.28□□□□□ -0.28
SHMT2-234ENST00000557703 H2AFJQ9BTM1 129 aa13.28□□□□□ -0.28
SHMT2-234ENST00000557703 HGH1Q9BTY7 390 aa13.28□□□□□ -0.28
SHMT2-234ENST00000557703 ZMYND15Q9H091 742 aa13.28□□□□□ -0.28
SHMT2-234ENST00000557703 SYNDIG1Q9H7V2 258 aa13.28□□□□□ -0.28
SHMT2-234ENST00000557703 RDH14Q9HBH5 336 aa13.28□□□□□ -0.28
SHMT2-234ENST00000557703 OGFRQ9NZT2 677 aa13.28□□□□□ -0.28
SHMT2-234ENST00000557703 GALPQ9UBC7 116 aa13.28□□□□□ -0.28
SHMT2-234ENST00000557703 ACACAQ13085 2346 aa13.27□□□□□ -0.28
SHMT2-234ENST00000557703 PIPSLA2A3N6 862 aa13.27□□□□□ -0.29
SHMT2-234ENST00000557703 OR6C74A6NCV1 312 aa13.27□□□□□ -0.29
SHMT2-234ENST00000557703 TMEM8BA6NDV4 472 aa13.27□□□□□ -0.29
SHMT2-234ENST00000557703 PLD2O14939 933 aa13.27□□□□□ -0.29
SHMT2-234ENST00000557703 KRT37O76014 449 aa13.27□□□□□ -0.29
SHMT2-234ENST00000557703 TSPAN12O95859 305 aa13.27□□□□□ -0.29
SHMT2-234ENST00000557703 ERGP11308 486 aa13.27□□□□□ -0.29
SHMT2-234ENST00000557703 TYRP1P17643 537 aa13.27□□□□□ -0.29
SHMT2-234ENST00000557703 CCND1P24385 295 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms