RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 CPA4Q9UI42 421 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 ZNF229Q9UJW7 825 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 ERVW-1Q9UQF0 538 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 GOLGA8CPA6NN73 597 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 STX7O15400 261 aaKnown RBP11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 FFAR2O15552 330 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 RGS10O43665 173 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 MYO1DO94832 1006 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 TACR2P21452 398 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 GNPDA1P46926 289 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 CLCN7P51798 805 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 ARHGDIAP52565 204 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 PPP5CP53041 499 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 NCS1P62166 190 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 DGCR6Q14129 220 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 SIM2Q14190 667 aaPredicted RBP11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 MAPK11Q15759 364 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 FAM110CQ1W6H9 321 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 CPZQ66K79 652 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 CAPN13Q6MZZ7 669 aaPredicted RBP11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 TAS2R42Q7RTR8 314 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 PAGE2Q7Z2X7 111 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 CALHM3Q86XJ0 350 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 PLD3Q8IV08 490 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 LGI2Q8N0V4 545 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 MYEOVQ96EZ4 313 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 FUBP3Q96I24 572 aaKnown RBP eCLIP11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 MS4A4AQ96JQ5 239 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 APOL4Q9BPW4 351 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 ZBED2Q9BTP6 218 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 GABARAPL1Q9H0R8 117 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 CLMPQ9H6B4 373 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 SCUBE2Q9NQ36 999 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 UBA2Q9UBT2 640 aaPredicted RBP11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 FBXO10Q9UK96 956 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 ANGPTL3Q9Y5C1 460 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 ACTL7AQ9Y615 435 aa11.58□□□□□ -0.56
VIPAS39-211ENST00000557658 CHD5Q8TDI0 1954 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 TRBV5-3A0A0A0MS03 114 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 A0A0D9SEW6 157 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 ZBBXA8MT70 800 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 TTC34A8MYJ7 566 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 MRPS14O60783 128 aaKnown RBP11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 ERN1O75460 977 aaKnown RBP11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 PRLP01236 227 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 MT-ND2P03891 347 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 HOXD9P28356 352 aaPredicted RBP11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 GRK4P32298 578 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 RGRP47804 291 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 HSPA7P48741 367 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 IL1RL1Q01638 556 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 KCNJ8Q15842 424 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 NFE2Q16621 373 aaPredicted RBP11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 GTDC1Q4AE62 458 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 CES5AQ6NT32 575 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 SBSNQ6UWP8 590 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 DSG4Q86SJ6 1040 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 CYP4Z1Q86W10 505 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 ARMC8Q8IUR7 673 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 ZDHHC21Q8IVQ6 265 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 STK40Q8N2I9 435 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 EFHBQ8N7U6 833 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 ZNF540Q8NDQ6 660 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 OR7D4Q8NG98 312 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 RHOXF1Q8NHV9 184 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 BRI3BPQ8WY22 251 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 FBXO32Q969P5 355 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 ITCHQ96J02 903 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 EXOC2Q96KP1 924 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 SMIM14Q96QK8 99 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 SPON2Q9BUD6 331 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 ALOXE3Q9BYJ1 711 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 MAGEH1Q9H213 219 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 EPS8L2Q9H6S3 715 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 ZFP14Q9HCL3 533 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 TSR3Q9UJK0 312 aaKnown RBP11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 DHRS7Q9Y394 339 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 PKP3Q9Y446 797 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 GMPPBQ9Y5P6 360 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 MICAL3Q7RTP6 2002 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 GREB1Q4ZG55 1949 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 IQCF5A8MTL0 148 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 F5H5T6 163 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 H0Y626 953 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 FFAR3O14843 346 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 GPR42O15529 346 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 SEC22BO75396 215 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 TRIM16O95361 564 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 FADS2O95864 444 aaKnown RBP11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 IGLV3-27P01718 113 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 CYP4B1P13584 511 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 CD40LGP29965 261 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 MASP1P48740 699 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 PCYT1AP49585 367 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 CLK3P49761 638 aaKnown RBP11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 CDC20Q12834 499 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 PHKG1Q16816 387 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 DEPDC1Q5TB30 811 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 LACC1Q8IV20 430 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms