RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 GNPDA1P46926 289 aa6.69□□□□□ -1.34
SPTLC2-206ENST00000557566 GLRBP48167 497 aa6.69□□□□□ -1.34
SPTLC2-206ENST00000557566 ART1P52961 327 aa6.69□□□□□ -1.34
SPTLC2-206ENST00000557566 PLTPP55058 493 aa6.69□□□□□ -1.34
SPTLC2-206ENST00000557566 KRTAP10-9P60411 292 aa6.69□□□□□ -1.34
SPTLC2-206ENST00000557566 RPS18P62269 152 aaKnown RBP6.69□□□□□ -1.34
SPTLC2-206ENST00000557566 RPS15P62841 145 aaKnown RBP6.69□□□□□ -1.34
SPTLC2-206ENST00000557566 KCNJ2P63252 427 aa6.69□□□□□ -1.34
SPTLC2-206ENST00000557566 IFI35P80217 286 aaPredicted RBP6.69□□□□□ -1.34
SPTLC2-206ENST00000557566 CALCOCO2Q13137 446 aa6.69□□□□□ -1.34
SPTLC2-206ENST00000557566 NME3Q13232 169 aa6.69□□□□□ -1.34
SPTLC2-206ENST00000557566 IL10RAQ13651 578 aa6.69□□□□□ -1.34
SPTLC2-206ENST00000557566 TAF11Q15544 211 aa6.69□□□□□ -1.34
SPTLC2-206ENST00000557566 ZNF630Q2M218 657 aaPredicted RBP6.69□□□□□ -1.34
SPTLC2-206ENST00000557566 SEL1L2Q5TEA6 688 aa6.69□□□□□ -1.34
SPTLC2-206ENST00000557566 ERAP2Q6P179 960 aa6.69□□□□□ -1.34
SPTLC2-206ENST00000557566 ZNF517Q6ZMY9 492 aaPredicted RBP6.69□□□□□ -1.34
SPTLC2-206ENST00000557566 SDCCAG8Q86SQ7 713 aaPredicted RBP6.69□□□□□ -1.34
SPTLC2-206ENST00000557566 ZNF761Q86XN6 746 aaPredicted RBP6.69□□□□□ -1.34
SPTLC2-206ENST00000557566 TDRPQ86YL5 185 aa6.69□□□□□ -1.34
SPTLC2-206ENST00000557566 PRELID2Q8N945 189 aa6.69□□□□□ -1.34
SPTLC2-206ENST00000557566 BBOF1Q8ND07 529 aa6.69□□□□□ -1.34
SPTLC2-206ENST00000557566 FBXO27Q8NI29 283 aa6.69□□□□□ -1.34
SPTLC2-206ENST00000557566 SLC35G2Q8TBE7 412 aa6.69□□□□□ -1.34
SPTLC2-206ENST00000557566 DYDC1Q8WWB3 177 aa6.69□□□□□ -1.34
SPTLC2-206ENST00000557566 ARHGEF2Q92974 986 aaKnown RBP6.69□□□□□ -1.34
SPTLC2-206ENST00000557566 UTP4Q969X6 686 aaKnown RBP6.69□□□□□ -1.34
SPTLC2-206ENST00000557566 SLC35C1Q96A29 364 aa6.69□□□□□ -1.34
SPTLC2-206ENST00000557566 WDR89Q96FK6 387 aaPredicted RBP6.69□□□□□ -1.34
SPTLC2-206ENST00000557566 HMCESQ96FZ2 354 aa6.69□□□□□ -1.34
SPTLC2-206ENST00000557566 OR6C1Q96RD1 312 aa6.69□□□□□ -1.34
SPTLC2-206ENST00000557566 ZSWIM1Q9BR11 485 aa6.69□□□□□ -1.34
SPTLC2-206ENST00000557566 LGR4Q9BXB1 951 aa6.69□□□□□ -1.34
SPTLC2-206ENST00000557566 VCXQ9H320 206 aa6.69□□□□□ -1.34
SPTLC2-206ENST00000557566 STN1Q9H668 368 aaKnown RBP6.69□□□□□ -1.34
SPTLC2-206ENST00000557566 ARHGEF38Q9NXL2 777 aa6.69□□□□□ -1.34
SPTLC2-206ENST00000557566 MPP6Q9NZW5 540 aa6.69□□□□□ -1.34
SPTLC2-206ENST00000557566 ACTL7AQ9Y615 435 aa6.69□□□□□ -1.34
SPTLC2-206ENST00000557566 USH1CQ9Y6N9 552 aa6.69□□□□□ -1.34
SPTLC2-206ENST00000557566 COL6A5A8TX70 2615 aa6.69□□□□□ -1.34
SPTLC2-206ENST00000557566 FLNAP21333 2647 aaKnown RBP6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 KRTAP4-8A0A0G2JLE6 195 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 TMEM120BA0PK00 339 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 DRGXA6NNA5 263 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 E5RJQ4 531 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 F5H423 210 aaPredicted RBP6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 PMM2O15305 246 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 KCNN4O15554 427 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 GRID2O43424 1007 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 PEX11AO75192 247 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 CDH16O75309 829 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 SPAG6O75602 509 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 BPNT1O95861 308 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 CD160O95971 181 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 IGSF6O95976 241 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 ALPPP05187 535 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 STSP08842 583 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 ALDH3A1P30838 453 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 ETFBP38117 255 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 COILP38432 576 aaPredicted RBP6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 MMP12P39900 470 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 ACTR1BP42025 376 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 GPD2P43304 727 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 MAPK9P45984 424 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 RPL21P46778 160 aaKnown RBP6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 PAPOLAP51003 745 aaKnown RBP6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 RRADP55042 308 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 ACTR1AP61163 376 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 OCRLQ01968 901 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 GNA12Q03113 381 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 KLC1Q07866 573 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 DYNC1I2Q13409 638 aaKnown RBP6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 ZNF235Q14590 738 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 CRB2Q5IJ48 1285 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 ATXN7L2Q5T6C5 722 aaPredicted RBP6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 ACBD5Q5T8D3 534 aaPredicted RBP6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 VWA5B1Q5TIE3 1220 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 KCNMB4Q86W47 210 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 PPP1R3BQ86XI6 285 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 PLXDC1Q8IUK5 500 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 ZNF683Q8IZ20 524 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 DEFB106AQ8N104 65 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 ZNF808Q8N4W9 903 aaPredicted RBP6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 FITM2Q8N6M3 262 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 UBR7Q8N806 425 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 SLC37A2Q8TED4 501 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 GRK7Q8WTQ7 553 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 CHTF18Q8WVB6 975 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 ITLN2Q8WWU7 325 aaPredicted RBP6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 VOPP1Q96AW1 172 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 C14orf79Q96F83 325 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 ELMO2Q96JJ3 720 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 TSC22D3Q99576 134 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 CCDC77Q9BR77 488 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 FAM192AQ9GZU8 254 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 TKTL2Q9H0I9 626 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 EPB41L1Q9H4G0 881 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 DCLRE1BQ9H816 532 aa6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 SSU72Q9NP77 194 aaKnown RBP6.68□□□□□ -1.34
SPTLC2-206ENST00000557566 PCDH12Q9NPG4 1184 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms