RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 CEP68Q76N32 757 aa11.16□□□□□ -0.62
SRP54-213ENST00000556994 LRRC8DQ7L1W4 858 aa11.16□□□□□ -0.62
SRP54-213ENST00000556994 GALNT10Q86SR1 603 aa11.16□□□□□ -0.62
SRP54-213ENST00000556994 ZCCHC7Q8N3Z6 543 aaKnown RBP11.16□□□□□ -0.62
SRP54-213ENST00000556994 TTC30BQ8N4P2 665 aa11.16□□□□□ -0.62
SRP54-213ENST00000556994 KCNJ9Q92806 393 aa11.16□□□□□ -0.62
SRP54-213ENST00000556994 PPP3R2Q96LZ3 170 aa11.16□□□□□ -0.62
SRP54-213ENST00000556994 PSKH2Q96QS6 385 aa11.16□□□□□ -0.62
SRP54-213ENST00000556994 PARK7Q99497 189 aaKnown RBP11.16□□□□□ -0.62
SRP54-213ENST00000556994 EGFL8Q99944 293 aa11.16□□□□□ -0.62
SRP54-213ENST00000556994 WDR12Q9GZL7 423 aaKnown RBP11.16□□□□□ -0.62
SRP54-213ENST00000556994 KAT8Q9H7Z6 458 aaKnown RBP11.16□□□□□ -0.62
SRP54-213ENST00000556994 SLC45A1Q9Y2W3 748 aa11.16□□□□□ -0.62
SRP54-213ENST00000556994 NAALAD2Q9Y3Q0 740 aa11.16□□□□□ -0.62
SRP54-213ENST00000556994 ANGPTL3Q9Y5C1 460 aa11.16□□□□□ -0.62
SRP54-213ENST00000556994 PCDHGA10Q9Y5H3 936 aa11.16□□□□□ -0.62
SRP54-213ENST00000556994 ORC6Q9Y5N6 252 aa11.16□□□□□ -0.62
SRP54-213ENST00000556994 MYO1GB0I1T2 1018 aa11.15□□□□□ -0.62
SRP54-213ENST00000556994 IFRD1O00458 451 aaPredicted RBP11.15□□□□□ -0.62
SRP54-213ENST00000556994 TLR5O60602 858 aa11.15□□□□□ -0.62
SRP54-213ENST00000556994 SCELO95171 688 aa11.15□□□□□ -0.62
SRP54-213ENST00000556994 FADS2O95864 444 aaKnown RBP11.15□□□□□ -0.62
SRP54-213ENST00000556994 OTCP00480 354 aa11.15□□□□□ -0.62
SRP54-213ENST00000556994 BMP1P13497 986 aa11.15□□□□□ -0.62
SRP54-213ENST00000556994 IGFBP5P24593 272 aa11.15□□□□□ -0.62
SRP54-213ENST00000556994 EPHA2P29317 976 aa11.15□□□□□ -0.62
SRP54-213ENST00000556994 MASP1P48740 699 aa11.15□□□□□ -0.62
SRP54-213ENST00000556994 CATSPEREQ5SY80 951 aa11.15□□□□□ -0.62
SRP54-213ENST00000556994 ALG1LQ6GMV1 187 aa11.15□□□□□ -0.62
SRP54-213ENST00000556994 USP50Q70EL3 339 aaPredicted RBP11.15□□□□□ -0.62
SRP54-213ENST00000556994 SLC22A15Q8IZD6 547 aa11.15□□□□□ -0.62
SRP54-213ENST00000556994 MFSD4AQ8N468 514 aa11.15□□□□□ -0.62
SRP54-213ENST00000556994 CLDN19Q8N6F1 224 aa11.15□□□□□ -0.62
SRP54-213ENST00000556994 VMP1Q96GC9 406 aa11.15□□□□□ -0.62
SRP54-213ENST00000556994 C8orf48Q96LL4 319 aa11.15□□□□□ -0.62
SRP54-213ENST00000556994 SEPT5Q99719 369 aaPredicted RBP11.15□□□□□ -0.62
SRP54-213ENST00000556994 INPP5KQ9BT40 448 aa11.15□□□□□ -0.62
SRP54-213ENST00000556994 BOCQ9BWV1 1114 aa11.15□□□□□ -0.62
SRP54-213ENST00000556994 CIPCQ9C0C6 399 aa11.15□□□□□ -0.62
SRP54-213ENST00000556994 ABCG8Q9H221 673 aa11.15□□□□□ -0.62
SRP54-213ENST00000556994 CRISPLD1Q9H336 500 aa11.15□□□□□ -0.62
SRP54-213ENST00000556994 TRIT1Q9H3H1 467 aaKnown RBP11.15□□□□□ -0.62
SRP54-213ENST00000556994 TMEM45AQ9NWC5 275 aa11.15□□□□□ -0.62
SRP54-213ENST00000556994 ZNF490Q9ULM2 529 aaPredicted RBP11.15□□□□□ -0.62
SRP54-213ENST00000556994 PKP3Q9Y446 797 aa11.15□□□□□ -0.62
SRP54-213ENST00000556994 SLC16A6O15403 523 aa11.15□□□□□ -0.62
SRP54-213ENST00000556994 RGS14O43566 566 aa11.15□□□□□ -0.62
SRP54-213ENST00000556994 ZNF682O95780 498 aa11.15□□□□□ -0.62
SRP54-213ENST00000556994 MT-ND2P03891 347 aa11.15□□□□□ -0.62
SRP54-213ENST00000556994 S100BP04271 92 aaPredicted RBP11.15□□□□□ -0.62
SRP54-213ENST00000556994 TGM1P22735 817 aa11.15□□□□□ -0.62
SRP54-213ENST00000556994 RYKP34925 604 aa11.15□□□□□ -0.62
SRP54-213ENST00000556994 CLK3P49761 638 aaKnown RBP11.15□□□□□ -0.62
SRP54-213ENST00000556994 GBX1Q14549 363 aa11.15□□□□□ -0.62
SRP54-213ENST00000556994 TMEM53Q6P2H8 277 aa11.15□□□□□ -0.62
SRP54-213ENST00000556994 MBOAT1Q6ZNC8 495 aa11.15□□□□□ -0.62
SRP54-213ENST00000556994 PAGE2Q7Z2X7 111 aa11.15□□□□□ -0.62
SRP54-213ENST00000556994 GPR149Q86SP6 731 aa11.15□□□□□ -0.62
SRP54-213ENST00000556994 SERINC5Q86VE9 423 aa11.15□□□□□ -0.62
SRP54-213ENST00000556994 SLC22A16Q86VW1 577 aa11.15□□□□□ -0.62
SRP54-213ENST00000556994 CHPFQ8IZ52 775 aa11.15□□□□□ -0.62
SRP54-213ENST00000556994 RGL4Q8IZJ4 473 aa11.15□□□□□ -0.62
SRP54-213ENST00000556994 LKAAEAR1Q8TD35 194 aa11.15□□□□□ -0.62
SRP54-213ENST00000556994 ITPKCQ96DU7 683 aa11.15□□□□□ -0.62
SRP54-213ENST00000556994 FAM120BQ96EK7 910 aaKnown RBP11.15□□□□□ -0.62
SRP54-213ENST00000556994 PYURFQ96I23 114 aa11.15□□□□□ -0.62
SRP54-213ENST00000556994 KLHL25Q9H0H3 589 aa11.15□□□□□ -0.62
SRP54-213ENST00000556994 TLR8Q9NR97 1041 aaKnown RBP11.15□□□□□ -0.62
SRP54-213ENST00000556994 RASSF1Q9NS23 344 aa11.15□□□□□ -0.62
SRP54-213ENST00000556994 AGO1Q9UL18 857 aaKnown RBP11.15□□□□□ -0.62
SRP54-213ENST00000556994 ABCG2Q9UNQ0 655 aa11.15□□□□□ -0.62
SRP54-213ENST00000556994 ZNF232Q9UNY5 417 aa11.15□□□□□ -0.62
SRP54-213ENST00000556994 VPS9D1Q9Y2B5 631 aa11.15□□□□□ -0.62
SRP54-213ENST00000556994 DHRS7Q9Y394 339 aa11.15□□□□□ -0.62
SRP54-213ENST00000556994 FAM32AQ9Y421 112 aaKnown RBP11.15□□□□□ -0.62
SRP54-213ENST00000556994 PCDHB5Q9Y5E4 795 aa11.15□□□□□ -0.62
SRP54-213ENST00000556994 TNPO3Q9Y5L0 923 aaKnown RBP11.15□□□□□ -0.62
SRP54-213ENST00000556994 TRPM7Q96QT4 1865 aa11.15□□□□□ -0.63
SRP54-213ENST00000556994 MOXD2PA6NHM9 499 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 A8MU76 341 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 LOC730098B7Z3J9 87 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 H0Y626 953 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 PFDN6O15212 129 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 ULK1O75385 1050 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 TRIM16O95361 564 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 IGLV3-27P01718 113 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 CCDC159P0C7I6 412 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 CTPS1P17812 591 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 CR2P20023 1033 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 DAPP51397 102 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 SGSHP51688 502 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 TWF1Q12792 350 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 CLCA4Q14CN2 919 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 PHKG1Q16816 387 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 DGUOKQ16854 277 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 VARS2Q5ST30 1063 aaKnown RBP11.14□□□□□ -0.63
SRP54-213ENST00000556994 C9orf131Q5VYM1 1079 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 SPRYD7Q5W111 196 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 C16orf59Q7L2K0 433 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 SAPCD2Q86UD0 394 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms