RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 CNSTQ6PJW8 725 aa10.37□□□□□ -0.75
LINC00239-201ENST00000556973 CEACAM20Q6UY09 585 aa10.37□□□□□ -0.75
LINC00239-201ENST00000556973 NEK10Q6ZWH5 1172 aa10.37□□□□□ -0.75
LINC00239-201ENST00000556973 CTAGE6Q86UF2 777 aa10.37□□□□□ -0.75
LINC00239-201ENST00000556973 CTAGE4Q8IX94 777 aa10.37□□□□□ -0.75
LINC00239-201ENST00000556973 PALM2Q8IXS6 379 aa10.37□□□□□ -0.75
LINC00239-201ENST00000556973 ZBTB2Q8N680 514 aa10.37□□□□□ -0.75
LINC00239-201ENST00000556973 SKA2Q8WVK7 121 aaPredicted RBP10.37□□□□□ -0.75
LINC00239-201ENST00000556973 INPP5DQ92835 1189 aa10.37□□□□□ -0.75
LINC00239-201ENST00000556973 RAD51AP1Q96B01 352 aa10.37□□□□□ -0.75
LINC00239-201ENST00000556973 DCBLD2Q96PD2 775 aa10.37□□□□□ -0.75
LINC00239-201ENST00000556973 TEFMQ96QE5 360 aaKnown RBP10.37□□□□□ -0.75
LINC00239-201ENST00000556973 MAP3K3Q99759 626 aa10.37□□□□□ -0.75
LINC00239-201ENST00000556973 AARSD1Q9BTE6 412 aaKnown RBP10.37□□□□□ -0.75
LINC00239-201ENST00000556973 PHACTR1Q9C0D0 580 aa10.37□□□□□ -0.75
LINC00239-201ENST00000556973 XKR8Q9H6D3 395 aa10.37□□□□□ -0.75
LINC00239-201ENST00000556973 OR6C2Q9NZP2 312 aa10.37□□□□□ -0.75
LINC00239-201ENST00000556973 ICKQ9UPZ9 632 aa10.37□□□□□ -0.75
LINC00239-201ENST00000556973 DHRS7Q9Y394 339 aa10.37□□□□□ -0.75
LINC00239-201ENST00000556973 PCDHB11Q9Y5F2 797 aa10.37□□□□□ -0.75
LINC00239-201ENST00000556973 ADAMTS20P59510 1910 aa10.37□□□□□ -0.75
LINC00239-201ENST00000556973 PIPSLA2A3N6 862 aa10.36□□□□□ -0.75
LINC00239-201ENST00000556973 GSAPA4D1B5 854 aa10.36□□□□□ -0.75
LINC00239-201ENST00000556973 MAP3K7O43318 606 aa10.36□□□□□ -0.75
LINC00239-201ENST00000556973 VPS26AO75436 327 aa10.36□□□□□ -0.75
LINC00239-201ENST00000556973 C1orf105O95561 183 aa10.36□□□□□ -0.75
LINC00239-201ENST00000556973 ZBTB11O95625 1053 aaPredicted RBP10.36□□□□□ -0.75
LINC00239-201ENST00000556973 GSTA2P09210 222 aa10.36□□□□□ -0.75
LINC00239-201ENST00000556973 TPBGLP0DKB5 382 aa10.36□□□□□ -0.75
LINC00239-201ENST00000556973 CBSLP0DN79 551 aa10.36□□□□□ -0.75
LINC00239-201ENST00000556973 CD9P21926 228 aa10.36□□□□□ -0.75
LINC00239-201ENST00000556973 CBSP35520 551 aa10.36□□□□□ -0.75
LINC00239-201ENST00000556973 CCNFP41002 786 aa10.36□□□□□ -0.75
LINC00239-201ENST00000556973 ARL4DP49703 201 aa10.36□□□□□ -0.75
LINC00239-201ENST00000556973 RAB28P51157 221 aa10.36□□□□□ -0.75
LINC00239-201ENST00000556973 PPP1CAP62136 330 aa10.36□□□□□ -0.75
LINC00239-201ENST00000556973 MGAT5Q09328 741 aa10.36□□□□□ -0.75
LINC00239-201ENST00000556973 FASTKD3Q14CZ7 662 aaKnown RBP10.36□□□□□ -0.75
LINC00239-201ENST00000556973 TRADDQ15628 312 aa10.36□□□□□ -0.75
LINC00239-201ENST00000556973 KLHL38Q2WGJ6 581 aa10.36□□□□□ -0.75
LINC00239-201ENST00000556973 ACSBG2Q5FVE4 666 aa10.36□□□□□ -0.75
LINC00239-201ENST00000556973 ANKS6Q68DC2 871 aa10.36□□□□□ -0.75
LINC00239-201ENST00000556973 TRMT10BQ6PF06 316 aaKnown RBP10.36□□□□□ -0.75
LINC00239-201ENST00000556973 CYS1Q717R9 158 aa10.36□□□□□ -0.75
LINC00239-201ENST00000556973 BPHLQ86WA6 291 aaPredicted RBP10.36□□□□□ -0.75
LINC00239-201ENST00000556973 DCUN1D3Q8IWE4 304 aa10.36□□□□□ -0.75
LINC00239-201ENST00000556973 ADGRF3Q8IZF5 1079 aa10.36□□□□□ -0.75
LINC00239-201ENST00000556973 RAB42Q8N4Z0 105 aa10.36□□□□□ -0.75
LINC00239-201ENST00000556973 CEP112Q8N8E3 955 aa10.36□□□□□ -0.75
LINC00239-201ENST00000556973 SIDT2Q8NBJ9 832 aaKnown RBP10.36□□□□□ -0.75
LINC00239-201ENST00000556973 FBXO25Q8TCJ0 367 aa10.36□□□□□ -0.75
LINC00239-201ENST00000556973 KCNE4Q8WWG9 221 aa10.36□□□□□ -0.75
LINC00239-201ENST00000556973 SEC14L1Q92503 715 aa10.36□□□□□ -0.75
LINC00239-201ENST00000556973 FAM136AQ96C01 138 aa10.36□□□□□ -0.75
LINC00239-201ENST00000556973 NAF1Q96HR8 494 aaKnown RBP10.36□□□□□ -0.75
LINC00239-201ENST00000556973 SLC41A2Q96JW4 573 aa10.36□□□□□ -0.75
LINC00239-201ENST00000556973 TWSG1Q9GZX9 223 aa10.36□□□□□ -0.75
LINC00239-201ENST00000556973 SAYSD1Q9NPB0 183 aa10.36□□□□□ -0.75
LINC00239-201ENST00000556973 TAS2R13Q9NYV9 303 aa10.36□□□□□ -0.75
LINC00239-201ENST00000556973 ACTR10Q9NZ32 417 aa10.36□□□□□ -0.75
LINC00239-201ENST00000556973 ZFATQ9P243 1243 aa10.36□□□□□ -0.75
LINC00239-201ENST00000556973 POMT2Q9UKY4 750 aa10.36□□□□□ -0.75
LINC00239-201ENST00000556973 CORO1CQ9ULV4 474 aaPredicted RBP10.36□□□□□ -0.75
LINC00239-201ENST00000556973 MED16Q9Y2X0 877 aa10.36□□□□□ -0.75
LINC00239-201ENST00000556973 B3GALT1Q9Y5Z6 326 aa10.36□□□□□ -0.75
LINC00239-201ENST00000556973 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.35□□□□□ -0.75
LINC00239-201ENST00000556973 STMND1H3BQB6 276 aa10.35□□□□□ -0.75
LINC00239-201ENST00000556973 EIF3FO00303 357 aaPredicted RBP10.35□□□□□ -0.75
LINC00239-201ENST00000556973 KLK10O43240 276 aa10.35□□□□□ -0.75
LINC00239-201ENST00000556973 F7P08709 466 aaPredicted RBP10.35□□□□□ -0.75
LINC00239-201ENST00000556973 CHRM5P08912 532 aaPredicted RBP10.35□□□□□ -0.75
LINC00239-201ENST00000556973 MPC1LP0DKB6 136 aa10.35□□□□□ -0.75
LINC00239-201ENST00000556973 LIPCP11150 499 aa10.35□□□□□ -0.75
LINC00239-201ENST00000556973 ENO3P13929 434 aaPredicted RBP10.35□□□□□ -0.75
LINC00239-201ENST00000556973 CDH3P22223 829 aa10.35□□□□□ -0.75
LINC00239-201ENST00000556973 GUCY2DQ02846 1103 aa10.35□□□□□ -0.75
LINC00239-201ENST00000556973 ACY1Q03154 408 aa10.35□□□□□ -0.75
LINC00239-201ENST00000556973 FOXM1Q08050 763 aa10.35□□□□□ -0.75
LINC00239-201ENST00000556973 ILF2Q12905 390 aaKnown RBP10.35□□□□□ -0.75
LINC00239-201ENST00000556973 GRB7Q14451 532 aa10.35□□□□□ -0.75
LINC00239-201ENST00000556973 KIR2DS3Q14952 304 aa10.35□□□□□ -0.75
LINC00239-201ENST00000556973 TMTC4Q5T4D3 741 aa10.35□□□□□ -0.75
LINC00239-201ENST00000556973 BROXQ5VW32 411 aa10.35□□□□□ -0.75
LINC00239-201ENST00000556973 ZDHHC24Q6UX98 284 aa10.35□□□□□ -0.75
LINC00239-201ENST00000556973 CYHR1Q6ZMK1 362 aa10.35□□□□□ -0.75
LINC00239-201ENST00000556973 C3orf62Q6ZUJ4 267 aa10.35□□□□□ -0.75
LINC00239-201ENST00000556973 SLC26A11Q86WA9 606 aa10.35□□□□□ -0.75
LINC00239-201ENST00000556973 DTX1Q86Y01 620 aa10.35□□□□□ -0.75
LINC00239-201ENST00000556973 D2HGDHQ8N465 521 aa10.35□□□□□ -0.75
LINC00239-201ENST00000556973 HNRNPLLQ8WVV9 542 aaKnown RBP10.35□□□□□ -0.75
LINC00239-201ENST00000556973 SLC22A18Q96BI1 424 aa10.35□□□□□ -0.75
LINC00239-201ENST00000556973 OR6C1Q96RD1 312 aa10.35□□□□□ -0.75
LINC00239-201ENST00000556973 GPR21Q99679 349 aa10.35□□□□□ -0.75
LINC00239-201ENST00000556973 SLC30A3Q99726 388 aa10.35□□□□□ -0.75
LINC00239-201ENST00000556973 MENTQ9BUN1 341 aa10.35□□□□□ -0.75
LINC00239-201ENST00000556973 RAB11FIP5Q9BXF6 653 aa10.35□□□□□ -0.75
LINC00239-201ENST00000556973 PITPNM3Q9BZ71 974 aa10.35□□□□□ -0.75
LINC00239-201ENST00000556973 FAM129AQ9BZQ8 928 aa10.35□□□□□ -0.75
LINC00239-201ENST00000556973 FAM114A2Q9NRY5 505 aa10.35□□□□□ -0.75
LINC00239-201ENST00000556973 SIDT1Q9NXL6 827 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 376.8 ms