RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 SLC22A11Q9NSA0 550 aa8.71□□□□□ -1.02
HNRNPC-227ENST00000556897 TXLNGQ9NUQ3 528 aa8.71□□□□□ -1.02
HNRNPC-227ENST00000556897 IRAK4Q9NWZ3 460 aa8.71□□□□□ -1.02
HNRNPC-227ENST00000556897 COPG2Q9UBF2 871 aa8.71□□□□□ -1.02
HNRNPC-227ENST00000556897 CRLS1Q9UJA2 301 aa8.71□□□□□ -1.02
HNRNPC-227ENST00000556897 PCM1Q15154 2024 aa8.71□□□□□ -1.02
HNRNPC-227ENST00000556897 CELSR1Q9NYQ6 3014 aa8.7□□□□□ -1.02
HNRNPC-227ENST00000556897 PCNX1Q96RV3 2341 aa8.7□□□□□ -1.02
HNRNPC-227ENST00000556897 PDZD2O15018 2839 aa8.7□□□□□ -1.02
HNRNPC-227ENST00000556897 A0A1B0GUH1 482 aa8.7□□□□□ -1.02
HNRNPC-227ENST00000556897 C17orf113A0A1B0GUU1 675 aa8.7□□□□□ -1.02
HNRNPC-227ENST00000556897 CCDC78A2IDD5 438 aa8.7□□□□□ -1.02
HNRNPC-227ENST00000556897 C2orf81A6NN90 581 aa8.7□□□□□ -1.02
HNRNPC-227ENST00000556897 AGTP01019 485 aa8.7□□□□□ -1.02
HNRNPC-227ENST00000556897 STSP08842 583 aa8.7□□□□□ -1.02
HNRNPC-227ENST00000556897 TNNT1P13805 278 aa8.7□□□□□ -1.02
HNRNPC-227ENST00000556897 ATP1B2P14415 290 aaPredicted RBP8.7□□□□□ -1.02
HNRNPC-227ENST00000556897 MMP11P24347 488 aa8.7□□□□□ -1.02
HNRNPC-227ENST00000556897 PBX1P40424 430 aa8.7□□□□□ -1.02
HNRNPC-227ENST00000556897 CD151P48509 253 aa8.7□□□□□ -1.02
HNRNPC-227ENST00000556897 NR2C2P49116 596 aa8.7□□□□□ -1.02
HNRNPC-227ENST00000556897 TMPRSS15P98073 1019 aa8.7□□□□□ -1.02
HNRNPC-227ENST00000556897 XIAPP98170 497 aa8.7□□□□□ -1.02
HNRNPC-227ENST00000556897 MPP3Q13368 585 aa8.7□□□□□ -1.02
HNRNPC-227ENST00000556897 TLR1Q15399 786 aa8.7□□□□□ -1.02
HNRNPC-227ENST00000556897 TAF1AQ15573 450 aaPredicted RBP8.7□□□□□ -1.02
HNRNPC-227ENST00000556897 ZXDCQ2QGD7 858 aaPredicted RBP8.7□□□□□ -1.02
HNRNPC-227ENST00000556897 ODF2Q5BJF6 829 aa8.7□□□□□ -1.02
HNRNPC-227ENST00000556897 IRAK1BP1Q5VVH5 260 aa8.7□□□□□ -1.02
HNRNPC-227ENST00000556897 PRAMEF13Q5VWM6 474 aa8.7□□□□□ -1.02
HNRNPC-227ENST00000556897 B3GNTL1Q67FW5 361 aaPredicted RBP8.7□□□□□ -1.02
HNRNPC-227ENST00000556897 IGFL2Q6UWQ7 119 aa8.7□□□□□ -1.02
HNRNPC-227ENST00000556897 MFSD7Q6UXD7 560 aa8.7□□□□□ -1.02
HNRNPC-227ENST00000556897 UNC5AQ6ZN44 842 aa8.7□□□□□ -1.02
HNRNPC-227ENST00000556897 BZW1Q7L1Q6 419 aaKnown RBP8.7□□□□□ -1.02
HNRNPC-227ENST00000556897 ZC3H18Q86VM9 953 aaKnown RBP8.7□□□□□ -1.02
HNRNPC-227ENST00000556897 NXPE1Q8N323 547 aa8.7□□□□□ -1.02
HNRNPC-227ENST00000556897 SLC35G2Q8TBE7 412 aa8.7□□□□□ -1.02
HNRNPC-227ENST00000556897 TFGQ92734 400 aaPredicted RBP8.7□□□□□ -1.02
HNRNPC-227ENST00000556897 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.7□□□□□ -1.021e-6■■■■■ 33.1
HNRNPC-227ENST00000556897 OR2A14Q96R47 310 aa8.7□□□□□ -1.02
HNRNPC-227ENST00000556897 COPS8Q99627 209 aa8.7□□□□□ -1.02
HNRNPC-227ENST00000556897 SLX1AQ9BQ83 275 aa8.7□□□□□ -1.02
HNRNPC-227ENST00000556897 APOL2Q9BQE5 337 aa8.7□□□□□ -1.02
HNRNPC-227ENST00000556897 NDC1Q9BTX1 674 aa8.7□□□□□ -1.02
HNRNPC-227ENST00000556897 RUBCNLQ9H714 662 aa8.7□□□□□ -1.02
HNRNPC-227ENST00000556897 MVB12BQ9H7P6 319 aa8.7□□□□□ -1.02
HNRNPC-227ENST00000556897 RSPH14Q9UHP6 348 aa8.7□□□□□ -1.02
HNRNPC-227ENST00000556897 CDC23Q9UJX2 597 aa8.7□□□□□ -1.02
HNRNPC-227ENST00000556897 CAPN11Q9UMQ6 739 aa8.7□□□□□ -1.02
HNRNPC-227ENST00000556897 ICKQ9UPZ9 632 aa8.7□□□□□ -1.02
HNRNPC-227ENST00000556897 LUC7L2Q9Y383 392 aaKnown RBP8.7□□□□□ -1.02
HNRNPC-227ENST00000556897 ITPR3Q14573 2671 aa8.7□□□□□ -1.02
HNRNPC-227ENST00000556897 SNRNP200O75643 2136 aaKnown RBP8.69□□□□□ -1.02
HNRNPC-227ENST00000556897 HIVEP1P15822 2718 aa8.69□□□□□ -1.02
HNRNPC-227ENST00000556897 HEATR9A2RTY3 570 aa8.69□□□□□ -1.02
HNRNPC-227ENST00000556897 C5orf60A6NFR6 353 aa8.69□□□□□ -1.02
HNRNPC-227ENST00000556897 AGAP14A8MT82 685 aa8.69□□□□□ -1.02
HNRNPC-227ENST00000556897 CFAP99D6REC4 459 aa8.69□□□□□ -1.02
HNRNPC-227ENST00000556897 CCL22O00626 93 aa8.69□□□□□ -1.02
HNRNPC-227ENST00000556897 CST8O60676 142 aa8.69□□□□□ -1.02
HNRNPC-227ENST00000556897 GYPCP04921 128 aa8.69□□□□□ -1.02
HNRNPC-227ENST00000556897 CHRM5P08912 532 aaPredicted RBP8.69□□□□□ -1.02
HNRNPC-227ENST00000556897 ITGALP20701 1170 aa8.69□□□□□ -1.02
HNRNPC-227ENST00000556897 ITGAXP20702 1163 aa8.69□□□□□ -1.02
HNRNPC-227ENST00000556897 ALAS2P22557 587 aa8.69□□□□□ -1.02
HNRNPC-227ENST00000556897 CDKN2BP42772 138 aa8.69□□□□□ -1.02
HNRNPC-227ENST00000556897 KCNK10P57789 538 aa8.69□□□□□ -1.02
HNRNPC-227ENST00000556897 OLIG2Q13516 323 aa8.69□□□□□ -1.02
HNRNPC-227ENST00000556897 BOP1Q14137 746 aaKnown RBP8.69□□□□□ -1.02
HNRNPC-227ENST00000556897 SLC18A3Q16572 532 aa8.69□□□□□ -1.02
HNRNPC-227ENST00000556897 ZNF658BQ4V348 819 aaPredicted RBP8.69□□□□□ -1.02
HNRNPC-227ENST00000556897 LRRC38Q5VT99 294 aa8.69□□□□□ -1.02
HNRNPC-227ENST00000556897 KAZNQ674X7 775 aa8.69□□□□□ -1.02
HNRNPC-227ENST00000556897 TLDC1Q6P9B6 456 aa8.69□□□□□ -1.02
HNRNPC-227ENST00000556897 FAM180AQ6UWF9 173 aa8.69□□□□□ -1.02
HNRNPC-227ENST00000556897 KIRREL2Q6UWL6 708 aa8.69□□□□□ -1.02
HNRNPC-227ENST00000556897 SHISA6Q6ZSJ9 500 aa8.69□□□□□ -1.02
HNRNPC-227ENST00000556897 MICALCLQ6ZW33 695 aa8.69□□□□□ -1.02
HNRNPC-227ENST00000556897 CATSPER1Q8NEC5 780 aa8.69□□□□□ -1.02
HNRNPC-227ENST00000556897 OR5AR1Q8NGP9 310 aa8.69□□□□□ -1.02
HNRNPC-227ENST00000556897 OR13C4Q8NGS5 318 aa8.69□□□□□ -1.02
HNRNPC-227ENST00000556897 FLVCR1-AS1Q8TAF5 88 aa8.69□□□□□ -1.02
HNRNPC-227ENST00000556897 COG1Q8WTW3 980 aa8.69□□□□□ -1.02
HNRNPC-227ENST00000556897 NACC2Q96BF6 587 aa8.69□□□□□ -1.02
HNRNPC-227ENST00000556897 ULK4Q96C45 1275 aa8.69□□□□□ -1.02
HNRNPC-227ENST00000556897 VAT1Q99536 393 aa8.69□□□□□ -1.02
HNRNPC-227ENST00000556897 FICDQ9BVA6 458 aa8.69□□□□□ -1.02
HNRNPC-227ENST00000556897 CHRNA10Q9GZZ6 450 aa8.69□□□□□ -1.02
HNRNPC-227ENST00000556897 OLAHQ9NV23 265 aa8.69□□□□□ -1.02
HNRNPC-227ENST00000556897 SPHK1Q9NYA1 384 aa8.69□□□□□ -1.02
HNRNPC-227ENST00000556897 HYOU1Q9Y4L1 999 aa8.69□□□□□ -1.02
HNRNPC-227ENST00000556897 HS3ST3B1Q9Y662 390 aa8.69□□□□□ -1.02
HNRNPC-227ENST00000556897 NUP210LQ5VU65 1888 aa8.68□□□□□ -1.02
HNRNPC-227ENST00000556897 A0A0J9YY10 115 aa8.68□□□□□ -1.02
HNRNPC-227ENST00000556897 SOCS6O14544 535 aa8.68□□□□□ -1.02
HNRNPC-227ENST00000556897 JRKO75564 520 aa8.68□□□□□ -1.02
HNRNPC-227ENST00000556897 SNRPB2P08579 225 aaKnown RBP8.68□□□□□ -1.02
HNRNPC-227ENST00000556897 TMEM253P0C7T8 217 aa8.68□□□□□ -1.02
HNRNPC-227ENST00000556897 TPBGLP0DKB5 382 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms