RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 PROSCO94903 275 aa13.41□□□□□ -0.26
ACTN1-219ENST00000556432 CTSBP07858 339 aa13.41□□□□□ -0.26
ACTN1-219ENST00000556432 KDELR1P24390 212 aa13.41□□□□□ -0.26
ACTN1-219ENST00000556432 TDGF1P3P51864 188 aa13.41□□□□□ -0.26
ACTN1-219ENST00000556432 CASP6P55212 293 aa13.41□□□□□ -0.26
ACTN1-219ENST00000556432 DYNLT1P63172 113 aa13.41□□□□□ -0.26
ACTN1-219ENST00000556432 MFAP5Q13361 173 aa13.41□□□□□ -0.26
ACTN1-219ENST00000556432 PTPRCAPQ14761 206 aa13.41□□□□□ -0.26
ACTN1-219ENST00000556432 ZIC1Q15915 447 aa13.41□□□□□ -0.26
ACTN1-219ENST00000556432 TEX44Q53QW1 395 aa13.41□□□□□ -0.26
ACTN1-219ENST00000556432 SASS6Q6UVJ0 657 aa13.41□□□□□ -0.26
ACTN1-219ENST00000556432 KIRREL2Q6UWL6 708 aa13.41□□□□□ -0.26
ACTN1-219ENST00000556432 SPNS3Q6ZMD2 512 aa13.41□□□□□ -0.26
ACTN1-219ENST00000556432 IPMKQ8NFU5 416 aa13.41□□□□□ -0.26
ACTN1-219ENST00000556432 DLG3Q92796 817 aa13.41□□□□□ -0.26
ACTN1-219ENST00000556432 POM121Q96HA1 1249 aa13.41□□□□□ -0.26
ACTN1-219ENST00000556432 LINC00615Q96LM1 132 aaPredicted RBP13.41□□□□□ -0.26
ACTN1-219ENST00000556432 SOX17Q9H6I2 414 aaPredicted RBP13.41□□□□□ -0.26
ACTN1-219ENST00000556432 ASB8Q9H765 288 aa13.41□□□□□ -0.26
ACTN1-219ENST00000556432 COG4Q9H9E3 785 aa13.41□□□□□ -0.26
ACTN1-219ENST00000556432 CTTNBP2NLQ9P2B4 639 aa13.41□□□□□ -0.26
ACTN1-219ENST00000556432 HS3ST3B1Q9Y662 390 aa13.41□□□□□ -0.26
ACTN1-219ENST00000556432 NUP210LQ5VU65 1888 aa13.41□□□□□ -0.26
ACTN1-219ENST00000556432 A0A0J9YY10 115 aa13.4□□□□□ -0.26
ACTN1-219ENST00000556432 LOC285095A0A1B0GVY8 99 aa13.4□□□□□ -0.26
ACTN1-219ENST00000556432 A0A1B0GX78 115 aa13.4□□□□□ -0.26
ACTN1-219ENST00000556432 CFAP99D6REC4 459 aa13.4□□□□□ -0.26
ACTN1-219ENST00000556432 H3BMH7 237 aa13.4□□□□□ -0.26
ACTN1-219ENST00000556432 PIM1P11309 404 aaPredicted RBP13.4□□□□□ -0.26
ACTN1-219ENST00000556432 NFKB1P19838 968 aa13.4□□□□□ -0.26
ACTN1-219ENST00000556432 PTPN3P26045 913 aa13.4□□□□□ -0.26
ACTN1-219ENST00000556432 PRLHRP49683 370 aa13.4□□□□□ -0.26
ACTN1-219ENST00000556432 SLC1A5Q15758 541 aa13.4□□□□□ -0.26
ACTN1-219ENST00000556432 FILIP1LQ4L180 1135 aa13.4□□□□□ -0.26
ACTN1-219ENST00000556432 ZNF324BQ6AW86 544 aaPredicted RBP13.4□□□□□ -0.26
ACTN1-219ENST00000556432 RPUSD3Q6P087 351 aaKnown RBP13.4□□□□□ -0.26
ACTN1-219ENST00000556432 KDELC1Q6UW63 502 aa13.4□□□□□ -0.26
ACTN1-219ENST00000556432 TTLL10Q6ZVT0 673 aa13.4□□□□□ -0.26
ACTN1-219ENST00000556432 RFX6Q8HWS3 928 aa13.4□□□□□ -0.26
ACTN1-219ENST00000556432 ZNF295-AS1Q8N0V1 137 aa13.4□□□□□ -0.26
ACTN1-219ENST00000556432 CCDC110Q8TBZ0 833 aa13.4□□□□□ -0.26
ACTN1-219ENST00000556432 CHTF18Q8WVB6 975 aa13.4□□□□□ -0.26
ACTN1-219ENST00000556432 TFGQ92734 400 aaPredicted RBP13.4□□□□□ -0.26
ACTN1-219ENST00000556432 FKBP10Q96AY3 582 aa13.4□□□□□ -0.26
ACTN1-219ENST00000556432 FSD1LQ9BXM9 530 aa13.4□□□□□ -0.26
ACTN1-219ENST00000556432 OR52A5Q9H2C5 316 aa13.4□□□□□ -0.26
ACTN1-219ENST00000556432 VPS37BQ9H9H4 285 aa13.4□□□□□ -0.26
ACTN1-219ENST00000556432 SLC22A11Q9NSA0 550 aa13.4□□□□□ -0.26
ACTN1-219ENST00000556432 SEC14L3Q9UDX4 400 aa13.4□□□□□ -0.26
ACTN1-219ENST00000556432 PLCL2Q9UPR0 1127 aa13.4□□□□□ -0.26
ACTN1-219ENST00000556432 ICKQ9UPZ9 632 aa13.4□□□□□ -0.26
ACTN1-219ENST00000556432 ARL5AQ9Y689 179 aa13.4□□□□□ -0.26
ACTN1-219ENST00000556432 TRAV17A0A0B4J275 112 aa13.39□□□□□ -0.27
ACTN1-219ENST00000556432 PRICKLE3O43900 615 aaPredicted RBP13.39□□□□□ -0.27
ACTN1-219ENST00000556432 SRP72O76094 671 aaKnown RBP13.39□□□□□ -0.27
ACTN1-219ENST00000556432 KLHL18O94889 574 aa13.39□□□□□ -0.27
ACTN1-219ENST00000556432 ESRRAP11474 423 aaPredicted RBP13.39□□□□□ -0.27
ACTN1-219ENST00000556432 SHMT2P34897 504 aa13.39□□□□□ -0.27
ACTN1-219ENST00000556432 PBX1P40424 430 aa13.39□□□□□ -0.27
ACTN1-219ENST00000556432 CA7P43166 264 aa13.39□□□□□ -0.27
ACTN1-219ENST00000556432 KRTAP10-9P60411 292 aa13.39□□□□□ -0.27
ACTN1-219ENST00000556432 SRSF11Q05519 484 aaKnown RBP13.39□□□□□ -0.27
ACTN1-219ENST00000556432 RBPJQ06330 500 aa13.39□□□□□ -0.27
ACTN1-219ENST00000556432 TESK1Q15569 626 aa13.39□□□□□ -0.27
ACTN1-219ENST00000556432 INAQ16352 499 aa13.39□□□□□ -0.27
ACTN1-219ENST00000556432 STX1AQ16623 288 aa13.39□□□□□ -0.27
ACTN1-219ENST00000556432 ODF2Q5BJF6 829 aa13.39□□□□□ -0.27
ACTN1-219ENST00000556432 XKRXQ6PP77 449 aa13.39□□□□□ -0.27
ACTN1-219ENST00000556432 OVCH1Q7RTY7 1134 aa13.39□□□□□ -0.27
ACTN1-219ENST00000556432 CEP97Q8IW35 865 aa13.39□□□□□ -0.27
ACTN1-219ENST00000556432 TEKT5Q96M29 485 aa13.39□□□□□ -0.27
ACTN1-219ENST00000556432 OLFM3Q96PB7 478 aa13.39□□□□□ -0.27
ACTN1-219ENST00000556432 TAAR6Q96RI8 345 aa13.39□□□□□ -0.27
ACTN1-219ENST00000556432 LMF1Q96S06 567 aa13.39□□□□□ -0.27
ACTN1-219ENST00000556432 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.39□□□□□ -0.27
ACTN1-219ENST00000556432 WDR54Q9H977 334 aa13.39□□□□□ -0.27
ACTN1-219ENST00000556432 ZNF160Q9HCG1 818 aa13.39□□□□□ -0.27
ACTN1-219ENST00000556432 RTN4Q9NQC3 1192 aaKnown RBP13.39□□□□□ -0.27
ACTN1-219ENST00000556432 PLA2G3Q9NZ20 509 aa13.39□□□□□ -0.27
ACTN1-219ENST00000556432 CHMP5Q9NZZ3 219 aa13.39□□□□□ -0.27
ACTN1-219ENST00000556432 KLHL8Q9P2G9 620 aaPredicted RBP13.39□□□□□ -0.27
ACTN1-219ENST00000556432 CTSFQ9UBX1 484 aa13.39□□□□□ -0.27
ACTN1-219ENST00000556432 FKBPLQ9UIM3 349 aa13.39□□□□□ -0.27
ACTN1-219ENST00000556432 TDRKHQ9Y2W6 561 aaKnown RBP13.39□□□□□ -0.27
ACTN1-219ENST00000556432 BZW2Q9Y6E2 419 aaKnown RBP13.39□□□□□ -0.27
ACTN1-219ENST00000556432 C2orf81A6NN90 581 aa13.38□□□□□ -0.27
ACTN1-219ENST00000556432 SGTAO43765 313 aa13.38□□□□□ -0.27
ACTN1-219ENST00000556432 NADKO95544 446 aaPredicted RBP13.38□□□□□ -0.27
ACTN1-219ENST00000556432 F10P00742 488 aa13.38□□□□□ -0.27
ACTN1-219ENST00000556432 EPOP01588 193 aa13.38□□□□□ -0.27
ACTN1-219ENST00000556432 CHRM5P08912 532 aaPredicted RBP13.38□□□□□ -0.27
ACTN1-219ENST00000556432 ZFXP17010 805 aaPredicted RBP13.38□□□□□ -0.27
ACTN1-219ENST00000556432 ITGAXP20702 1163 aa13.38□□□□□ -0.27
ACTN1-219ENST00000556432 CAPN3P20807 821 aa13.38□□□□□ -0.27
ACTN1-219ENST00000556432 PDHA2P29803 388 aa13.38□□□□□ -0.27
ACTN1-219ENST00000556432 CD68P34810 354 aaPredicted RBP13.38□□□□□ -0.27
ACTN1-219ENST00000556432 GABRA4P48169 554 aa13.38□□□□□ -0.27
ACTN1-219ENST00000556432 SMSP52788 366 aa13.38□□□□□ -0.27
ACTN1-219ENST00000556432 ARSFP54793 590 aa13.38□□□□□ -0.27
ACTN1-219ENST00000556432 Q0VFX4 171 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms