RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 DAOAP59103 153 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 DNAJB13P59910 316 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 DLG1Q12959 904 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 MRPL49Q13405 166 aaKnown RBP4.36□□□□□ -1.71
ATXN3-241ENST00000556374 SQSTM1Q13501 440 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 PEX6Q13608 980 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 FASTKQ14296 549 aaKnown RBP4.36□□□□□ -1.71
ATXN3-241ENST00000556374 POU6F1Q14863 301 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 TCEA2Q15560 299 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 MAPRE1Q15691 268 aaKnown RBP4.36□□□□□ -1.71
ATXN3-241ENST00000556374 ARL13AQ5H913 290 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-241ENST00000556374 BRMS1LQ5PSV4 323 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 PPM1LQ5SGD2 360 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 CERCAMQ5T4B2 595 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 CES4AQ5XG92 561 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 REP15Q6BDI9 236 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 ZNF470Q6ECI4 717 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 KIAA0930Q6ICG6 404 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-241ENST00000556374 ARMC6Q6NXE6 501 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 PGM2L1Q6PCE3 622 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 DCLRE1AQ6PJP8 1040 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 RBM44Q6ZP01 1051 aaKnown RBP4.36□□□□□ -1.71
ATXN3-241ENST00000556374 KBTBD6Q86V97 674 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 SATL1Q86VE3 508 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 ZC3HC1Q86WB0 502 aaKnown RBP4.36□□□□□ -1.71
ATXN3-241ENST00000556374 ZNF354CQ86Y25 554 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 TERB1Q8NA31 727 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 IPMKQ8NFU5 416 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 OR52N2Q8NGI0 321 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 B4GALNT2Q8NHY0 566 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 PROKR1Q8TCW9 393 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 STYXQ8WUJ0 223 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 KCTD4Q8WVF5 259 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 ARNTL2Q8WYA1 636 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 USP13Q92995 863 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-241ENST00000556374 NMD3Q96D46 503 aaKnown RBP4.36□□□□□ -1.71
ATXN3-241ENST00000556374 DGCR14Q96DF8 476 aaKnown RBP4.36□□□□□ -1.71
ATXN3-241ENST00000556374 MFSD3Q96ES6 412 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 PGAP3Q96FM1 320 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-241ENST00000556374 RMND5BQ96G75 393 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-241ENST00000556374 HIC2Q96JB3 615 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 MARK4Q96L34 752 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 LENG8Q96PV6 779 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-241ENST00000556374 OR52B2Q96RD2 323 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 HAPLN3Q96S86 360 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 CDRT15Q96T59 188 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 PRPF18Q99633 342 aaKnown RBP4.36□□□□□ -1.71
ATXN3-241ENST00000556374 CCT7Q99832 543 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 MRPL57Q9BQC6 102 aaKnown RBP4.36□□□□□ -1.71
ATXN3-241ENST00000556374 APOL2Q9BQE5 337 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 SLC25A23Q9BV35 468 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 OSBPL11Q9BXB4 747 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 EIF2AQ9BY44 585 aaKnown RBP4.36□□□□□ -1.71
ATXN3-241ENST00000556374 RHOBTB2Q9BYZ6 727 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 C20orf27Q9GZN8 174 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 TKTL2Q9H0I9 626 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 MUC13Q9H3R2 512 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 ZNF696Q9H7X3 374 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 ZMAT4Q9H898 229 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 TRPC7Q9HCX4 862 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 SPAG4Q9NPE6 437 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 ENTPD7Q9NQZ7 604 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 PNPLA3Q9NST1 481 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 GID8Q9NWU2 228 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 CLIC5Q9NZA1 410 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 ATXN10Q9UBB4 475 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 CIDEBQ9UHD4 219 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 MAGEL2Q9UJ55 1249 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 FBXW11Q9UKB1 542 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 APPL1Q9UKG1 709 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 CDH9Q9ULB4 789 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 PADI4Q9UM07 663 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 FAF1Q9UNN5 650 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-241ENST00000556374 FIS1Q9Y3D6 152 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 MFHAS1Q9Y4C4 1052 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 COPG1Q9Y678 874 aaKnown RBP4.36□□□□□ -1.71
ATXN3-241ENST00000556374 SQORQ9Y6N5 450 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 SCN5AQ14524 2016 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 FASNP49327 2511 aaKnown RBP4.35□□□□□ -1.71
ATXN3-241ENST00000556374 ZCWPW2A0A1B0GU75 182 aa4.35□□□□□ -1.71
ATXN3-241ENST00000556374 CCDC78A2IDD5 438 aa4.35□□□□□ -1.71
ATXN3-241ENST00000556374 C17orf102A2RUQ5 167 aa4.35□□□□□ -1.71
ATXN3-241ENST00000556374 PRR23AA6NEV1 266 aa4.35□□□□□ -1.71
ATXN3-241ENST00000556374 KCNU1A8MYU2 1149 aa4.35□□□□□ -1.71
ATXN3-241ENST00000556374 H0YJX3 145 aa4.35□□□□□ -1.71
ATXN3-241ENST00000556374 PSMD12O00232 456 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-241ENST00000556374 CLDN5O00501 218 aa4.35□□□□□ -1.71
ATXN3-241ENST00000556374 ANGPT2O15123 496 aa4.35□□□□□ -1.71
ATXN3-241ENST00000556374 UBDO15205 165 aa4.35□□□□□ -1.71
ATXN3-241ENST00000556374 PFDN6O15212 129 aa4.35□□□□□ -1.71
ATXN3-241ENST00000556374 SEPT4O43236 478 aa4.35□□□□□ -1.71
ATXN3-241ENST00000556374 AKAP10O43572 662 aa4.35□□□□□ -1.71
ATXN3-241ENST00000556374 PFDN1O60925 122 aa4.35□□□□□ -1.71
ATXN3-241ENST00000556374 BCAS2O75934 225 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-241ENST00000556374 CHEK2O96017 543 aa4.35□□□□□ -1.71
ATXN3-241ENST00000556374 PENKP01210 267 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-241ENST00000556374 JCHAINP01591 159 aa4.35□□□□□ -1.71
ATXN3-241ENST00000556374 RPLP2P05387 115 aaKnown RBP4.35□□□□□ -1.71
ATXN3-241ENST00000556374 CHRNGP07510 517 aa4.35□□□□□ -1.71
ATXN3-241ENST00000556374 MYL3P08590 195 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms