RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 ANXA6P08133 673 aa10.75□□□□□ -0.69
TMEM260-208ENST00000555905 ANXA5P08758 320 aa10.75□□□□□ -0.69
TMEM260-208ENST00000555905 MTHFD1P11586 935 aaKnown RBP10.75□□□□□ -0.69
TMEM260-208ENST00000555905 NCF1P14598 390 aaPredicted RBP10.75□□□□□ -0.69
TMEM260-208ENST00000555905 NDUFS1P28331 727 aa10.75□□□□□ -0.69
TMEM260-208ENST00000555905 MPLP40238 635 aa10.75□□□□□ -0.69
TMEM260-208ENST00000555905 MDH1P40925 334 aaKnown RBP10.75□□□□□ -0.69
TMEM260-208ENST00000555905 BDKRB1P46663 353 aa10.75□□□□□ -0.69
TMEM260-208ENST00000555905 HNMTP50135 292 aa10.75□□□□□ -0.69
TMEM260-208ENST00000555905 PRKAA2P54646 552 aa10.75□□□□□ -0.69
TMEM260-208ENST00000555905 ALDH18A1P54886 795 aaKnown RBP10.75□□□□□ -0.69
TMEM260-208ENST00000555905 CDKL1Q00532 357 aa10.75□□□□□ -0.69
TMEM260-208ENST00000555905 NFKB2Q00653 900 aa10.75□□□□□ -0.69
TMEM260-208ENST00000555905 BNC1Q01954 994 aa10.75□□□□□ -0.69
TMEM260-208ENST00000555905 GRIK2Q13002 908 aa10.75□□□□□ -0.69
TMEM260-208ENST00000555905 CLCA4Q14CN2 919 aa10.75□□□□□ -0.69
TMEM260-208ENST00000555905 PFKFB4Q16877 469 aa10.75□□□□□ -0.69
TMEM260-208ENST00000555905 TRIM61Q5EBN2 209 aa10.75□□□□□ -0.69
TMEM260-208ENST00000555905 PRAMEF14Q5SWL7 426 aa10.75□□□□□ -0.69
TMEM260-208ENST00000555905 LIPMQ5VYY2 423 aa10.75□□□□□ -0.69
TMEM260-208ENST00000555905 LAIR1Q6GTX8 287 aa10.75□□□□□ -0.69
TMEM260-208ENST00000555905 SULT1C3Q6IMI6 304 aa10.75□□□□□ -0.69
TMEM260-208ENST00000555905 SLC23A3Q6PIS1 610 aa10.75□□□□□ -0.69
TMEM260-208ENST00000555905 RASGRP3Q8IV61 690 aa10.75□□□□□ -0.69
TMEM260-208ENST00000555905 TRIM48Q8IWZ4 208 aa10.75□□□□□ -0.69
TMEM260-208ENST00000555905 TBC1D21Q8IYX1 336 aa10.75□□□□□ -0.69
TMEM260-208ENST00000555905 TCAIMQ8N3R3 496 aa10.75□□□□□ -0.69
TMEM260-208ENST00000555905 RAB42Q8N4Z0 105 aa10.75□□□□□ -0.69
TMEM260-208ENST00000555905 PDPRQ8NCN5 879 aa10.75□□□□□ -0.69
TMEM260-208ENST00000555905 ZNF548Q8NEK5 533 aaPredicted RBP10.75□□□□□ -0.69
TMEM260-208ENST00000555905 FAM46DQ8NEK8 389 aa10.75□□□□□ -0.69
TMEM260-208ENST00000555905 OR5K2Q8NHB8 316 aa10.75□□□□□ -0.69
TMEM260-208ENST00000555905 ATL1Q8WXF7 558 aa10.75□□□□□ -0.69
TMEM260-208ENST00000555905 DLG3Q92796 817 aa10.75□□□□□ -0.69
TMEM260-208ENST00000555905 RAD51AP1Q96B01 352 aa10.75□□□□□ -0.69
TMEM260-208ENST00000555905 CXorf40BQ96DE9 158 aa10.75□□□□□ -0.69
TMEM260-208ENST00000555905 CCDC138Q96M89 665 aa10.75□□□□□ -0.69
TMEM260-208ENST00000555905 FERD3LQ96RJ6 166 aa10.75□□□□□ -0.69
TMEM260-208ENST00000555905 ELF4Q99607 663 aaPredicted RBP10.75□□□□□ -0.69
TMEM260-208ENST00000555905 MECRQ9BV79 373 aa10.75□□□□□ -0.69
TMEM260-208ENST00000555905 NUSAP1Q9BXS6 441 aaKnown RBP10.75□□□□□ -0.69
TMEM260-208ENST00000555905 IRF2BPLQ9H1B7 796 aa10.75□□□□□ -0.69
TMEM260-208ENST00000555905 ARRDC1-AS1Q9H2J1 176 aa10.75□□□□□ -0.69
TMEM260-208ENST00000555905 CAPN10Q9HC96 672 aa10.75□□□□□ -0.69
TMEM260-208ENST00000555905 OXSMQ9NWU1 459 aa10.75□□□□□ -0.69
TMEM260-208ENST00000555905 POLG2Q9UHN1 485 aa10.75□□□□□ -0.69
TMEM260-208ENST00000555905 CFAP20Q9Y6A4 193 aaKnown RBP10.75□□□□□ -0.69
TMEM260-208ENST00000555905 KIR2DS5A0A0G2JLQ3 304 aa10.74□□□□□ -0.69
TMEM260-208ENST00000555905 A0A0G2JNG1 304 aa10.74□□□□□ -0.69
TMEM260-208ENST00000555905 A6NCN8 305 aa10.74□□□□□ -0.69
TMEM260-208ENST00000555905 NEMP2A6NFY4 417 aa10.74□□□□□ -0.69
TMEM260-208ENST00000555905 OR52A4PA6NMU1 304 aa10.74□□□□□ -0.69
TMEM260-208ENST00000555905 A8MT66 165 aa10.74□□□□□ -0.69
TMEM260-208ENST00000555905 LMO7DNF2Z398 122 aa10.74□□□□□ -0.69
TMEM260-208ENST00000555905 STX16-NPEPL1H3BU86 382 aa10.74□□□□□ -0.69
TMEM260-208ENST00000555905 KIR2DS3K7RE56 304 aa10.74□□□□□ -0.69
TMEM260-208ENST00000555905 MYO1CO00159 1063 aa10.74□□□□□ -0.69
TMEM260-208ENST00000555905 STX16O14662 325 aa10.74□□□□□ -0.69
TMEM260-208ENST00000555905 KHNYNO15037 678 aaKnown RBP10.74□□□□□ -0.69
TMEM260-208ENST00000555905 KLK8O60259 260 aa10.74□□□□□ -0.69
TMEM260-208ENST00000555905 SDC3O75056 442 aa10.74□□□□□ -0.69
TMEM260-208ENST00000555905 CER1O95813 267 aa10.74□□□□□ -0.69
TMEM260-208ENST00000555905 EML2O95834 649 aa10.74□□□□□ -0.69
TMEM260-208ENST00000555905 CELA2BP08218 269 aaPredicted RBP10.74□□□□□ -0.69
TMEM260-208ENST00000555905 MTHFD2P13995 350 aa10.74□□□□□ -0.69
TMEM260-208ENST00000555905 RXRGP48443 463 aa10.74□□□□□ -0.69
TMEM260-208ENST00000555905 GYS2P54840 703 aa10.74□□□□□ -0.69
TMEM260-208ENST00000555905 DNAJB13P59910 316 aa10.74□□□□□ -0.69
TMEM260-208ENST00000555905 GUCY1A3Q02108 690 aa10.74□□□□□ -0.69
TMEM260-208ENST00000555905 KIR2DS5Q14953 304 aa10.74□□□□□ -0.69
TMEM260-208ENST00000555905 CHI3L2Q15782 390 aa10.74□□□□□ -0.69
TMEM260-208ENST00000555905 PDK4Q16654 411 aa10.74□□□□□ -0.69
TMEM260-208ENST00000555905 ZNF423Q2M1K9 1284 aa10.74□□□□□ -0.69
TMEM260-208ENST00000555905 HLA-BQ31612 363 aa10.74□□□□□ -0.69
TMEM260-208ENST00000555905 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.74□□□□□ -0.69
TMEM260-208ENST00000555905 CFAP157Q5JU67 520 aa10.74□□□□□ -0.69
TMEM260-208ENST00000555905 IYDQ6PHW0 289 aa10.74□□□□□ -0.69
TMEM260-208ENST00000555905 PTGR2Q8N8N7 351 aaPredicted RBP10.74□□□□□ -0.69
TMEM260-208ENST00000555905 AVL9Q8NBF6 648 aa10.74□□□□□ -0.69
TMEM260-208ENST00000555905 PHC3Q8NDX5 983 aa10.74□□□□□ -0.69
TMEM260-208ENST00000555905 OR5AR1Q8NGP9 310 aa10.74□□□□□ -0.69
TMEM260-208ENST00000555905 OR9A1PQ8NGU1 263 aa10.74□□□□□ -0.69
TMEM260-208ENST00000555905 RAB3IL1Q8TBN0 382 aa10.74□□□□□ -0.69
TMEM260-208ENST00000555905 LRRC8CQ8TDW0 803 aa10.74□□□□□ -0.69
TMEM260-208ENST00000555905 ZDHHC1Q8WTX9 485 aa10.74□□□□□ -0.69
TMEM260-208ENST00000555905 FBXL8Q96CD0 374 aa10.74□□□□□ -0.69
TMEM260-208ENST00000555905 PHF21BQ96EK2 531 aa10.74□□□□□ -0.69
TMEM260-208ENST00000555905 MAGEB18Q96M61 343 aa10.74□□□□□ -0.69
TMEM260-208ENST00000555905 CAPS2Q9BXY5 557 aa10.74□□□□□ -0.69
TMEM260-208ENST00000555905 MANSC1Q9H8J5 431 aa10.74□□□□□ -0.69
TMEM260-208ENST00000555905 WWOXQ9NZC7 414 aa10.74□□□□□ -0.69
TMEM260-208ENST00000555905 NCKIPSDQ9NZQ3 722 aa10.74□□□□□ -0.69
TMEM260-208ENST00000555905 SCHIP1Q9P0W5 487 aaPredicted RBP10.74□□□□□ -0.69
TMEM260-208ENST00000555905 SIRPGQ9P1W8 387 aa10.74□□□□□ -0.69
TMEM260-208ENST00000555905 TDRKHQ9Y2W6 561 aaKnown RBP10.74□□□□□ -0.69
TMEM260-208ENST00000555905 TNPO3Q9Y5L0 923 aaKnown RBP10.74□□□□□ -0.69
TMEM260-208ENST00000555905 CSNK1G3Q9Y6M4 447 aa10.74□□□□□ -0.69
TMEM260-208ENST00000555905 CACNA1EQ15878 2313 aa10.74□□□□□ -0.69
TMEM260-208ENST00000555905 ZNF839A8K0R7 811 aa10.73□□□□□ -0.69
TMEM260-208ENST00000555905 PATE3B3GLJ2 98 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms