RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 MLC1Q15049 377 aa6.77□□□□□ -1.32
SYNE2-216ENST00000555002 VTCN1Q7Z7D3 282 aa6.77□□□□□ -1.32
SYNE2-216ENST00000555002 ZNF398Q8TD17 642 aa6.77□□□□□ -1.32
SYNE2-216ENST00000555002 MAFIPQ8WZ33 124 aa6.77□□□□□ -1.32
SYNE2-216ENST00000555002 C16orf58Q96GQ5 468 aa6.77□□□□□ -1.32
SYNE2-216ENST00000555002 FCRL2Q96LA5 508 aaPredicted RBP6.77□□□□□ -1.32
SYNE2-216ENST00000555002 NELFAQ9H3P2 528 aa6.77□□□□□ -1.32
SYNE2-216ENST00000555002 GNG8Q9UK08 70 aa6.77□□□□□ -1.32
SYNE2-216ENST00000555002 SPATA31E1Q6ZUB1 1445 aa6.77□□□□□ -1.32
SYNE2-216ENST00000555002 A6NLC8 198 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 ADAMTS3O15072 1205 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 B4GALT2O60909 372 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 RPP40O75818 363 aaKnown RBP6.77□□□□□ -1.33
SYNE2-216ENST00000555002 SLC16A8O95907 504 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 IFNA2P01563 188 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 ATF6P18850 670 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 NR4A1P22736 598 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 ZNF143P52747 638 aaPredicted RBP6.77□□□□□ -1.33
SYNE2-216ENST00000555002 BLMHQ13867 455 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 ZNF34Q8IZ26 560 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 MREGQ8N565 214 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 CEP76Q8TAP6 659 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 NUS1Q96E22 293 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 PIWIL1Q96J94 861 aaKnown RBP6.77□□□□□ -1.33
SYNE2-216ENST00000555002 PHB2Q99623 299 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 ASPNQ9BXN1 380 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 TTTY10Q9BZA0 68 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 ZDHHC4Q9NPG8 344 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 SNX15Q9NRS6 342 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 CLDND1Q9NY35 253 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 COMMD3Q9UBI1 195 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 ZDHHC9Q9Y397 364 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 BACE2Q9Y5Z0 518 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 COMMD3-BMI1R4GMX3 469 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 GRXCR1A8MXD5 290 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 H3BQF6 201 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 CCRL2O00421 344 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 SCDO00767 359 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 IL7RP16871 459 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 CCR8P51685 355 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 S100A12P80511 92 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 DEFB115Q30KQ5 88 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 ANKRD26P1Q6NSI1 321 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 TMEM220Q6QAJ8 160 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 NSMCE3Q96MG7 304 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 STRADBQ9C0K7 418 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 TVP23BQ9NYZ1 205 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 SNX10Q9Y5X0 201 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 AKAP6Q13023 2319 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 TRPM1Q7Z4N2 1603 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 DDTLA6NHG4 134 aaPredicted RBP6.77□□□□□ -1.33
SYNE2-216ENST00000555002 PRMT5O14744 637 aaPredicted RBP6.77□□□□□ -1.33
SYNE2-216ENST00000555002 MAGEA3P43357 314 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 PGM2L1Q6PCE3 622 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 TBC1D15Q8TC07 691 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 PNPLA2Q96AD5 504 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 SSX3Q99909 188 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 TAS2R14Q9NYV8 317 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 PLK4O00444 970 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 TPPPO94811 219 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 ZNF12P17014 697 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 PSMA1P25786 263 aaKnown RBP6.77□□□□□ -1.33
SYNE2-216ENST00000555002 HNRNPKP61978 463 aaKnown RBP eCLIP6.77□□□□□ -1.33
SYNE2-216ENST00000555002 SIM2Q14190 667 aaPredicted RBP6.77□□□□□ -1.33
SYNE2-216ENST00000555002 KCTD19Q17RG1 926 aaPredicted RBP6.77□□□□□ -1.33
SYNE2-216ENST00000555002 OGFOD2Q6N063 350 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 STOML3Q8TAV4 291 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 ARHGEF17Q96PE2 2063 aaPredicted RBP6.77□□□□□ -1.33
SYNE2-216ENST00000555002 GPR21Q99679 349 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 MTMR10Q9NXD2 777 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 HAO2Q9NYQ3 351 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 A0A1W2PQ67 120 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 CXCL11O14625 94 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 CCNE2O96020 404 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 ITGA2BP08514 1039 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 CTHP32929 405 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 FOXK1P85037 733 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 PPIGQ13427 754 aaKnown RBP eCLIP6.77□□□□□ -1.33
SYNE2-216ENST00000555002 PLEKHG6Q3KR16 790 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 LACTB2Q53H82 288 aaPredicted RBP6.77□□□□□ -1.33
SYNE2-216ENST00000555002 LDB1Q86U70 411 aaPredicted RBP6.77□□□□□ -1.33
SYNE2-216ENST00000555002 DNAJA3Q96EY1 480 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 ADAD1Q96M93 576 aaKnown RBP6.77□□□□□ -1.33
SYNE2-216ENST00000555002 TMED9Q9BVK6 235 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 PCDH18Q9HCL0 1135 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 SDHAF3Q9NRP4 125 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 PNPOQ9NVS9 261 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 HIF1ANQ9NWT6 349 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 LYARQ9NX58 379 aaKnown RBP6.77□□□□□ -1.33
SYNE2-216ENST00000555002 MAGEL2Q9UJ55 1249 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 PCDHGB1Q9Y5G3 927 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 DNMT3AQ9Y6K1 912 aaPredicted RBP6.77□□□□□ -1.33
SYNE2-216ENST00000555002 ADCY10Q96PN6 1610 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 ATG2BQ96BY7 2078 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 UNC5CO95185 931 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 PRAMEF12O95522 483 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 LAG3P18627 525 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 VAMP1P23763 118 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 NR1H2P55055 460 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 HMBOX1Q6NT76 420 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms