RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 DR1Q01658 176 aa10.34□□□□□ -0.75
SHMT2-213ENST00000554600 PTK6Q13882 451 aa10.34□□□□□ -0.75
SHMT2-213ENST00000554600 DNAJC21Q5F1R6 531 aaKnown RBP10.34□□□□□ -0.75
SHMT2-213ENST00000554600 RNASEH2BQ5TBB1 312 aaKnown RBP10.34□□□□□ -0.75
SHMT2-213ENST00000554600 ARMC3Q5W041 872 aa10.34□□□□□ -0.75
SHMT2-213ENST00000554600 ZNF470Q6ECI4 717 aa10.34□□□□□ -0.75
SHMT2-213ENST00000554600 TTC23LQ6PF05 361 aa10.34□□□□□ -0.75
SHMT2-213ENST00000554600 C6orf15Q6UXA7 325 aaPredicted RBP10.34□□□□□ -0.75
SHMT2-213ENST00000554600 UNC5AQ6ZN44 842 aa10.34□□□□□ -0.75
SHMT2-213ENST00000554600 TIPARPQ7Z3E1 657 aaKnown RBP10.34□□□□□ -0.75
SHMT2-213ENST00000554600 PCGF5Q86SE9 256 aa10.34□□□□□ -0.75
SHMT2-213ENST00000554600 C17orf53Q8N3J3 647 aaPredicted RBP10.34□□□□□ -0.75
SHMT2-213ENST00000554600 NAT8LQ8N9F0 302 aa10.34□□□□□ -0.75
SHMT2-213ENST00000554600 OR5K2Q8NHB8 316 aa10.34□□□□□ -0.75
SHMT2-213ENST00000554600 SLC39A7Q92504 469 aa10.34□□□□□ -0.75
SHMT2-213ENST00000554600 TCF12Q99081 682 aa10.34□□□□□ -0.75
SHMT2-213ENST00000554600 ARHGAP9Q9BRR9 750 aa10.34□□□□□ -0.75
SHMT2-213ENST00000554600 TRIM31Q9BZY9 425 aa10.34□□□□□ -0.75
SHMT2-213ENST00000554600 P2RY12Q9H244 342 aa10.34□□□□□ -0.75
SHMT2-213ENST00000554600 CCDC68Q9H2F9 335 aa10.34□□□□□ -0.75
SHMT2-213ENST00000554600 C1GALT1Q9NS00 363 aa10.34□□□□□ -0.75
SHMT2-213ENST00000554600 C20orf96Q9NUD7 363 aaPredicted RBP10.34□□□□□ -0.75
SHMT2-213ENST00000554600 ACTR10Q9NZ32 417 aa10.34□□□□□ -0.75
SHMT2-213ENST00000554600 PCYOX1Q9UHG3 505 aa10.34□□□□□ -0.75
SHMT2-213ENST00000554600 SLC39A10Q9ULF5 831 aa10.34□□□□□ -0.75
SHMT2-213ENST00000554600 VPS9D1Q9Y2B5 631 aa10.34□□□□□ -0.75
SHMT2-213ENST00000554600 TMEM184BQ9Y519 407 aaPredicted RBP10.34□□□□□ -0.75
SHMT2-213ENST00000554600 UNC79Q9P2D8 2635 aa10.33□□□□□ -0.76
SHMT2-213ENST00000554600 LOC101059948A0A1B0GTJ6 334 aa10.33□□□□□ -0.76
SHMT2-213ENST00000554600 H3BMM5 538 aa10.33□□□□□ -0.76
SHMT2-213ENST00000554600 CCDC188H7C350 402 aa10.33□□□□□ -0.76
SHMT2-213ENST00000554600 ERVH48-1M5A8F1 160 aa10.33□□□□□ -0.76
SHMT2-213ENST00000554600 ATXN7O15265 892 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-213ENST00000554600 GPC4O75487 556 aa10.33□□□□□ -0.76
SHMT2-213ENST00000554600 DLGAP3O95886 979 aa10.33□□□□□ -0.76
SHMT2-213ENST00000554600 F7P08709 466 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-213ENST00000554600 CCNYL3P0C7X3 344 aa10.33□□□□□ -0.76
SHMT2-213ENST00000554600 ST6GAL1P15907 406 aa10.33□□□□□ -0.76
SHMT2-213ENST00000554600 WT1P19544 449 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-213ENST00000554600 CASQ1P31415 396 aa10.33□□□□□ -0.76
SHMT2-213ENST00000554600 CYP4F2P78329 520 aa10.33□□□□□ -0.76
SHMT2-213ENST00000554600 ABHD18Q0P651 414 aa10.33□□□□□ -0.76
SHMT2-213ENST00000554600 CTBP1Q13363 440 aa10.33□□□□□ -0.76
SHMT2-213ENST00000554600 LONRF1Q17RB8 773 aa10.33□□□□□ -0.76
SHMT2-213ENST00000554600 TYSND1Q2T9J0 566 aa10.33□□□□□ -0.76
SHMT2-213ENST00000554600 BBS9Q3SYG4 887 aa10.33□□□□□ -0.76
SHMT2-213ENST00000554600 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.33□□□□□ -0.76
SHMT2-213ENST00000554600 CTSL3PQ5NE16 218 aa10.33□□□□□ -0.76
SHMT2-213ENST00000554600 CNSTQ6PJW8 725 aa10.33□□□□□ -0.76
SHMT2-213ENST00000554600 SPESP1Q6UW49 350 aa10.33□□□□□ -0.76
SHMT2-213ENST00000554600 TRIM73Q86UV7 250 aa10.33□□□□□ -0.76
SHMT2-213ENST00000554600 TAX1BP1Q86VP1 789 aa10.33□□□□□ -0.76
SHMT2-213ENST00000554600 CREG2Q8IUH2 290 aa10.33□□□□□ -0.76
SHMT2-213ENST00000554600 CILP2Q8IUL8 1156 aa10.33□□□□□ -0.76
SHMT2-213ENST00000554600 TMEM126BQ8IUX1 230 aa10.33□□□□□ -0.76
SHMT2-213ENST00000554600 DCUN1D3Q8IWE4 304 aa10.33□□□□□ -0.76
SHMT2-213ENST00000554600 DENND6AQ8IWF6 608 aa10.33□□□□□ -0.76
SHMT2-213ENST00000554600 ADGRF3Q8IZF5 1079 aa10.33□□□□□ -0.76
SHMT2-213ENST00000554600 CARFQ8N187 725 aa10.33□□□□□ -0.76
SHMT2-213ENST00000554600 D2HGDHQ8N465 521 aa10.33□□□□□ -0.76
SHMT2-213ENST00000554600 C2orf73Q8N5S3 287 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-213ENST00000554600 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.33□□□□□ -0.76
SHMT2-213ENST00000554600 LPGAT1Q92604 370 aa10.33□□□□□ -0.76
SHMT2-213ENST00000554600 N4BP2L2Q92802 583 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-213ENST00000554600 SIGLEC10Q96LC7 697 aa10.33□□□□□ -0.76
SHMT2-213ENST00000554600 FOPNLQ96NB1 174 aa10.33□□□□□ -0.76
SHMT2-213ENST00000554600 RUNDC3BQ96NL0 473 aa10.33□□□□□ -0.76
SHMT2-213ENST00000554600 TRIM51Q9BSJ1 452 aa10.33□□□□□ -0.76
SHMT2-213ENST00000554600 EFHD1Q9BUP0 239 aa10.33□□□□□ -0.76
SHMT2-213ENST00000554600 FBXO6Q9NRD1 293 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-213ENST00000554600 SEMA5BQ9P283 1151 aa10.33□□□□□ -0.76
SHMT2-213ENST00000554600 RUVBL2Q9Y230 463 aaKnown RBP10.33□□□□□ -0.76
SHMT2-213ENST00000554600 BTRCQ9Y297 605 aa10.33□□□□□ -0.76
SHMT2-213ENST00000554600 ZNF891A8MT65 544 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-213ENST00000554600 TMEM150CB9EJG8 249 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 TTI1O43156 1089 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 KATNA1O75449 491 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 BANF1O75531 89 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 SCRG1O75711 98 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 USP1O94782 785 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 SLCO2B1O94956 709 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 TIAF1O95411 115 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 ESR1P03372 595 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 MT-ND3P03897 115 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 PRB1P04280 392 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 NTRK1P04629 796 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 CHRM5P08912 532 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-213ENST00000554600 PRKAR1AP10644 381 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 PKMP14618 531 aaKnown RBP10.32□□□□□ -0.76
SHMT2-213ENST00000554600 UGT2B7P16662 529 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 PGAM1P18669 254 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 DLSTP36957 453 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 STAT5AP42229 794 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 PTGIRP43119 386 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 MAGEA3P43357 314 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 BDKRB1P46663 353 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 TUBB4BP68371 445 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 DHX9Q08211 1270 aaKnown RBP10.32□□□□□ -0.76
SHMT2-213ENST00000554600 TUBB2AQ13885 445 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 LY6DQ14210 128 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms