RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 MLLT10P55197 1068 aa4.86□□□□□ -1.63
ATXN3-228ENST00000554592 B4GALNT1Q00973 533 aa4.86□□□□□ -1.63
ATXN3-228ENST00000554592 MC1RQ01726 317 aa4.86□□□□□ -1.63
ATXN3-228ENST00000554592 CUL4AQ13619 759 aa4.86□□□□□ -1.63
ATXN3-228ENST00000554592 RAB32Q13637 225 aa4.86□□□□□ -1.63
ATXN3-228ENST00000554592 PMS2P11Q13670 270 aa4.86□□□□□ -1.63
ATXN3-228ENST00000554592 C16orf72Q14CZ0 275 aa4.86□□□□□ -1.63
ATXN3-228ENST00000554592 CERCAMQ5T4B2 595 aa4.86□□□□□ -1.63
ATXN3-228ENST00000554592 CAPRIN2Q6IMN6 1127 aaKnown RBP4.86□□□□□ -1.63
ATXN3-228ENST00000554592 TMEM270Q6UE05 265 aa4.86□□□□□ -1.63
ATXN3-228ENST00000554592 TMEM110Q86TL2 294 aa4.86□□□□□ -1.63
ATXN3-228ENST00000554592 SETD3Q86TU7 594 aaPredicted RBP4.86□□□□□ -1.63
ATXN3-228ENST00000554592 PIM3Q86V86 326 aa4.86□□□□□ -1.63
ATXN3-228ENST00000554592 VPS36Q86VN1 386 aa4.86□□□□□ -1.63
ATXN3-228ENST00000554592 HEATR4Q86WZ0 1026 aa4.86□□□□□ -1.63
ATXN3-228ENST00000554592 TICAM1Q8IUC6 712 aa4.86□□□□□ -1.63
ATXN3-228ENST00000554592 RHOT2Q8IXI1 618 aa4.86□□□□□ -1.63
ATXN3-228ENST00000554592 CACNA2D3Q8IZS8 1091 aa4.86□□□□□ -1.63
ATXN3-228ENST00000554592 PCDH20Q8N6Y1 951 aaKnown RBP4.86□□□□□ -1.63
ATXN3-228ENST00000554592 CCDC112Q8NEF3 446 aa4.86□□□□□ -1.63
ATXN3-228ENST00000554592 FAM46DQ8NEK8 389 aa4.86□□□□□ -1.63
ATXN3-228ENST00000554592 OR56A3Q8NH54 315 aa4.86□□□□□ -1.63
ATXN3-228ENST00000554592 TSACCQ96A04 125 aaPredicted RBP4.86□□□□□ -1.63
ATXN3-228ENST00000554592 ZNF396Q96N95 335 aaPredicted RBP4.86□□□□□ -1.63
ATXN3-228ENST00000554592 PSMB7Q99436 277 aa4.86□□□□□ -1.63
ATXN3-228ENST00000554592 THAP9Q9H5L6 903 aa4.86□□□□□ -1.63
ATXN3-228ENST00000554592 PRDM8Q9NQV8 689 aa4.86□□□□□ -1.63
ATXN3-228ENST00000554592 LRIT1Q9P2V4 623 aa4.86□□□□□ -1.63
ATXN3-228ENST00000554592 XPR1Q9UBH6 696 aa4.86□□□□□ -1.63
ATXN3-228ENST00000554592 VPS51Q9UID3 782 aa4.86□□□□□ -1.63
ATXN3-228ENST00000554592 VANGL2Q9ULK5 521 aa4.86□□□□□ -1.63
ATXN3-228ENST00000554592 CDYLQ9Y232 598 aa4.86□□□□□ -1.63
ATXN3-228ENST00000554592 PLXNA2O75051 1894 aa4.86□□□□□ -1.63
ATXN3-228ENST00000554592 A0A0D9SEW6 157 aa4.85□□□□□ -1.63
ATXN3-228ENST00000554592 EFCAB7A8K855 629 aa4.85□□□□□ -1.63
ATXN3-228ENST00000554592 APOL1O14791 398 aa4.85□□□□□ -1.63
ATXN3-228ENST00000554592 AREL1O15033 823 aa4.85□□□□□ -1.63
ATXN3-228ENST00000554592 CETN3O15182 167 aa4.85□□□□□ -1.63
ATXN3-228ENST00000554592 ZNF185O15231 689 aa4.85□□□□□ -1.63
ATXN3-228ENST00000554592 NUDT21O43809 227 aaKnown RBP4.85□□□□□ -1.63
ATXN3-228ENST00000554592 RAD1O60671 282 aa4.85□□□□□ -1.63
ATXN3-228ENST00000554592 YEATS4O95619 227 aa4.85□□□□□ -1.63
ATXN3-228ENST00000554592 PRKCGP05129 697 aa4.85□□□□□ -1.63
ATXN3-228ENST00000554592 ADH4P08319 380 aa4.85□□□□□ -1.63
ATXN3-228ENST00000554592 EPB41P11171 864 aaKnown RBP4.85□□□□□ -1.63
ATXN3-228ENST00000554592 GNLYP22749 145 aa4.85□□□□□ -1.63
ATXN3-228ENST00000554592 GPD2P43304 727 aa4.85□□□□□ -1.63
ATXN3-228ENST00000554592 CCNHP51946 323 aaPredicted RBP4.85□□□□□ -1.63
ATXN3-228ENST00000554592 RNASE9P60153 205 aaKnown RBP4.85□□□□□ -1.63
ATXN3-228ENST00000554592 SRP54P61011 504 aaKnown RBP4.85□□□□□ -1.63
ATXN3-228ENST00000554592 POU6F2P78424 691 aaPredicted RBP4.85□□□□□ -1.63
ATXN3-228ENST00000554592 BTKQ06187 659 aa4.85□□□□□ -1.63
ATXN3-228ENST00000554592 LRMPQ12912 555 aa4.85□□□□□ -1.63
ATXN3-228ENST00000554592 TRA2AQ13595 282 aaKnown RBP eCLIP4.85□□□□□ -1.63
ATXN3-228ENST00000554592 BOP1Q14137 746 aaKnown RBP4.85□□□□□ -1.63
ATXN3-228ENST00000554592 ALG11Q2TAA5 492 aa4.85□□□□□ -1.63
ATXN3-228ENST00000554592 DEFB109BQ30KR1 87 aa4.85□□□□□ -1.63
ATXN3-228ENST00000554592 EDRF1Q3B7T1 1238 aa4.85□□□□□ -1.63
ATXN3-228ENST00000554592 C14orf28Q4W4Y0 310 aa4.85□□□□□ -1.63
ATXN3-228ENST00000554592 ZNF805Q5CZA5 627 aa4.85□□□□□ -1.63
ATXN3-228ENST00000554592 DCAF12Q5T6F0 453 aa4.85□□□□□ -1.63
ATXN3-228ENST00000554592 RESP18Q5W5W9 173 aa4.85□□□□□ -1.63
ATXN3-228ENST00000554592 C22orf39Q6P5X5 142 aa4.85□□□□□ -1.63
ATXN3-228ENST00000554592 ENPP7Q6UWV6 458 aa4.85□□□□□ -1.63
ATXN3-228ENST00000554592 LRRC31Q6UY01 552 aa4.85□□□□□ -1.63
ATXN3-228ENST00000554592 LINGO4Q6UY18 593 aa4.85□□□□□ -1.63
ATXN3-228ENST00000554592 PARS2Q7L3T8 475 aaKnown RBP4.85□□□□□ -1.63
ATXN3-228ENST00000554592 RD3Q7Z3Z2 195 aa4.85□□□□□ -1.63
ATXN3-228ENST00000554592 TAF8Q7Z7C8 310 aa4.85□□□□□ -1.63
ATXN3-228ENST00000554592 DEFB106AQ8N104 65 aa4.85□□□□□ -1.63
ATXN3-228ENST00000554592 MPP5Q8N3R9 675 aa4.85□□□□□ -1.63
ATXN3-228ENST00000554592 GUF1Q8N442 669 aaKnown RBP4.85□□□□□ -1.63
ATXN3-228ENST00000554592 RYBPQ8N488 228 aaPredicted RBP4.85□□□□□ -1.63
ATXN3-228ENST00000554592 DCAF4L2Q8NA75 395 aa4.85□□□□□ -1.63
ATXN3-228ENST00000554592 OR56A1Q8NGH5 318 aa4.85□□□□□ -1.63
ATXN3-228ENST00000554592 CCDC47Q96A33 483 aaKnown RBP4.85□□□□□ -1.63
ATXN3-228ENST00000554592 KIAA1143Q96AT1 154 aaPredicted RBP4.85□□□□□ -1.63
ATXN3-228ENST00000554592 ISG20Q96AZ6 181 aaKnown RBP4.85□□□□□ -1.63
ATXN3-228ENST00000554592 SNX22Q96L94 193 aa4.85□□□□□ -1.63
ATXN3-228ENST00000554592 C1orf74Q96LT6 269 aa4.85□□□□□ -1.63
ATXN3-228ENST00000554592 ZSWIM1Q9BR11 485 aa4.85□□□□□ -1.63
ATXN3-228ENST00000554592 CNPPD1Q9BV87 410 aa4.85□□□□□ -1.63
ATXN3-228ENST00000554592 SPATA5L1Q9BVQ7 753 aa4.85□□□□□ -1.63
ATXN3-228ENST00000554592 DDA1Q9BW61 102 aa4.85□□□□□ -1.63
ATXN3-228ENST00000554592 TEX101Q9BY14 249 aa4.85□□□□□ -1.63
ATXN3-228ENST00000554592 WDR12Q9GZL7 423 aaKnown RBP4.85□□□□□ -1.63
ATXN3-228ENST00000554592 INTS2Q9H0H0 1204 aaKnown RBP4.85□□□□□ -1.63
ATXN3-228ENST00000554592 SIK2Q9H0K1 926 aa4.85□□□□□ -1.63
ATXN3-228ENST00000554592 GPN2Q9H9Y4 310 aaPredicted RBP4.85□□□□□ -1.63
ATXN3-228ENST00000554592 MBNL1Q9NR56 388 aaKnown RBP4.85□□□□□ -1.63
ATXN3-228ENST00000554592 DDIT4Q9NX09 232 aa4.85□□□□□ -1.63
ATXN3-228ENST00000554592 SLC39A1Q9NY26 324 aa4.85□□□□□ -1.63
ATXN3-228ENST00000554592 ETAA1Q9NY74 926 aa4.85□□□□□ -1.63
ATXN3-228ENST00000554592 MTMR6Q9Y217 621 aa4.85□□□□□ -1.63
ATXN3-228ENST00000554592 REXO2Q9Y3B8 237 aaKnown RBP4.85□□□□□ -1.63
ATXN3-228ENST00000554592 DGKBQ9Y6T7 804 aa4.85□□□□□ -1.63
ATXN3-228ENST00000554592 USP9YO00507 2555 aaPredicted RBP4.84□□□□□ -1.63
ATXN3-228ENST00000554592 LRRK2Q5S007 2527 aa4.84□□□□□ -1.63
ATXN3-228ENST00000554592 TLN1Q9Y490 2541 aaKnown RBP4.84□□□□□ -1.63
ATXN3-228ENST00000554592 SYNJ2BP-COX16A0A087WUM0 186 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms