RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 CAND1Q86VP6 1230 aaKnown RBP3.25□□□□□ -1.89
SYNE2-212ENST00000554584 GALNT13Q8IUC8 556 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 CIDECQ96AQ7 238 aaPredicted RBP3.25□□□□□ -1.89
SYNE2-212ENST00000554584 FBXL8Q96CD0 374 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 ITCHQ96J02 903 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 RACGAP1Q9H0H5 632 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 EBF3Q9H4W6 596 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 NAALADL1Q9UQQ1 740 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 SLC28A1O00337 649 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 HSPB6O14558 160 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 OPN1SWP03999 348 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 SAGP10523 405 aaPredicted RBP3.25□□□□□ -1.89
SYNE2-212ENST00000554584 DPP6P42658 865 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 SOX2P48431 317 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 PLA2G7Q13093 441 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 PDGFRLQ15198 375 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 TMEM220Q6QAJ8 160 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 CCDC116Q8IYX3 515 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 BPIFCQ8NFQ6 507 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 OR5AK3PQ8NH89 298 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 HDAC7Q8WUI4 952 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 RDH12Q96NR8 316 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 GPR174Q9BXC1 333 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 TLR9Q9NR96 1032 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 ANKRD10Q9NXR5 420 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 EFCAB10A6NFE3 127 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 SLC25A14O95258 325 aaPredicted RBP3.25□□□□□ -1.89
SYNE2-212ENST00000554584 GLUD1P00367 558 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 RRM1P23921 792 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 PCSK1P29120 753 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 SERPINB8P50452 374 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 ILF3Q12906 894 aaKnown RBP eCLIP3.25□□□□□ -1.89
SYNE2-212ENST00000554584 PTPRNQ16849 979 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 CLEC12AQ5QGZ9 265 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 EMC10Q5UCC4 262 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 GALNT18Q6P9A2 607 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 AFTPHQ6ULP2 937 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 ARSKQ6UWY0 536 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 GRASPQ7Z6J2 395 aaPredicted RBP3.25□□□□□ -1.89
SYNE2-212ENST00000554584 TRIM73Q86UV7 250 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 RHBDD1Q8TEB9 315 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 GAB3Q8WWW8 586 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 DPEP3Q9H4B8 488 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 FAM120CQ9NX05 1096 aaKnown RBP3.25□□□□□ -1.89
SYNE2-212ENST00000554584 AHSPQ9NZD4 102 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 PCDHB2Q9Y5E7 798 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 MED13Q9UHV7 2174 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 NCOA3Q9Y6Q9 1424 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 MEIS3P2A8K0S8 358 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 SERPINB7O75635 380 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 ZNF35P13682 527 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 IL18Q14116 193 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 UGT8Q16880 541 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 FBXO47Q5MNV8 452 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 TMEFF1Q8IYR6 380 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 ZNF276Q8N554 614 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 SMARCD2Q92925 531 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 ZNF649Q9BS31 505 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 TKTL2Q9H0I9 626 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 TEX13DA0A0J9YY54 714 aaPredicted RBP3.25□□□□□ -1.89
SYNE2-212ENST00000554584 NUDT19A8MXV4 375 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 GPR182O15218 404 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 ZBTB14O43829 449 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 HCKP08631 526 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 AKR1A1P14550 325 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 AFF1P51825 1210 aaKnown RBP3.25□□□□□ -1.89
SYNE2-212ENST00000554584 RHDQ02161 417 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 TAF10Q12962 218 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 RASA2Q15283 850 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 LRRC69Q6ZNQ3 347 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 ACOT12Q8WYK0 555 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 ADAD1Q96M93 576 aaKnown RBP3.25□□□□□ -1.89
SYNE2-212ENST00000554584 CTRCQ99895 268 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 SPATC1LQ9H0A9 340 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 PPM1HQ9ULR3 514 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 BARX2Q9UMQ3 279 aaPredicted RBP3.25□□□□□ -1.89
SYNE2-212ENST00000554584 GMPPBQ9Y5P6 360 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 SPATA31A3Q5VYP0 1347 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 CDC42BPBQ9Y5S2 1711 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 TRIM64CA6NLI5 447 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 SLC2A5P22732 501 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 CTBP2P56545 445 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 OR12D2P58182 307 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 LAMTOR4Q0VGL1 99 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 COL9A3Q14050 684 aaPredicted RBP3.25□□□□□ -1.89
SYNE2-212ENST00000554584 ZBTB6Q15916 424 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 ADNP2Q6IQ32 1131 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 CROCCP3Q8IVE0 287 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 MISPQ8IVT2 679 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 ZSCAN4Q8NAM6 433 aaPredicted RBP3.25□□□□□ -1.89
SYNE2-212ENST00000554584 SGSM3Q96HU1 749 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 PSKH2Q96QS6 385 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 PHPT1Q9NRX4 125 aaPredicted RBP3.25□□□□□ -1.89
SYNE2-212ENST00000554584 NYAP2Q9P242 653 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 NUFIP1Q9UHK0 495 aaKnown RBP3.25□□□□□ -1.89
SYNE2-212ENST00000554584 ZNF639Q9UID6 485 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 UBQLN1Q9UMX0 589 aaKnown RBP3.25□□□□□ -1.89
SYNE2-212ENST00000554584 WIF1Q9Y5W5 379 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 CDC42BPGQ6DT37 1551 aa3.25□□□□□ -1.89
SYNE2-212ENST00000554584 AP5Z1O43299 807 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms