RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 DHRS4Q9BTZ2 278 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 TLR10Q9BXR5 811 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 CHST8Q9H2A9 424 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 ACTR5Q9H9F9 607 aaPredicted RBP6.4□□□□□ -1.38
SLIRP-203ENST00000554074 PCMTD2Q9NV79 361 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 ACTR10Q9NZ32 417 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 SMARCAL1Q9NZC9 954 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 OR6C2Q9NZP2 312 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 TCFL5Q9UL49 500 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 PACSIN2Q9UNF0 486 aaPredicted RBP6.4□□□□□ -1.38
SLIRP-203ENST00000554074 ICKQ9UPZ9 632 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 AP1M2Q9Y6Q5 423 aa6.4□□□□□ -1.38
SLIRP-203ENST00000554074 PCSK5Q92824 1860 aa6.4□□□□□ -1.39
SLIRP-203ENST00000554074 SCN2AQ99250 2005 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 TCRBV7S2A1N4TA0A589 114 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 CCDC162PA2VCL2 907 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 C9J4A7 227 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 BHMG1C9JSJ3 638 aaPredicted RBP6.39□□□□□ -1.39
SLIRP-203ENST00000554074 K7EM74 188 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 LIASO43766 372 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 TMEM63AO94886 807 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 FTCDO95954 541 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 TUBB4AP04350 444 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 CHRM5P08912 532 aaPredicted RBP6.39□□□□□ -1.39
SLIRP-203ENST00000554074 OR56A5P0C7T3 313 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 PRSS56P0CW18 603 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 AGXTP21549 392 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 PPARGP37231 505 aaPredicted RBP6.39□□□□□ -1.39
SLIRP-203ENST00000554074 GABRA4P48169 554 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 PGDP52209 483 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 RRADP55042 308 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 RPS18P62269 152 aaKnown RBP6.39□□□□□ -1.39
SLIRP-203ENST00000554074 UBAP2LQ14157 1087 aaKnown RBP6.39□□□□□ -1.39
SLIRP-203ENST00000554074 KIR2DS3Q14952 304 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 NCF4Q15080 339 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 SLC5A12Q1EHB4 618 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 TSTD2Q5T7W7 516 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 SEL1L2Q5TEA6 688 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 ARMC3Q5W041 872 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 RHBDD2Q6NTF9 364 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 DRICH1Q6PGQ1 229 aaPredicted RBP6.39□□□□□ -1.39
SLIRP-203ENST00000554074 FBXO38Q6PIJ6 1188 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 UNC5AQ6ZN44 842 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 CDHR3Q6ZTQ4 885 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 MED25Q71SY5 747 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 ATCAYQ86WG3 371 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 GPR135Q8IZ08 494 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 SLC22A15Q8IZD6 547 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 ENDOVQ8N8Q3 282 aaKnown RBP6.39□□□□□ -1.39
SLIRP-203ENST00000554074 C19orf47Q8N9M1 422 aaKnown RBP6.39□□□□□ -1.39
SLIRP-203ENST00000554074 TMEM102Q8N9M5 508 aaPredicted RBP6.39□□□□□ -1.39
SLIRP-203ENST00000554074 DNAAF3Q8N9W5 541 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 GLIS1Q8NBF1 620 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 PHC3Q8NDX5 983 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 OR52K1Q8NGK4 314 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 OR5AR1Q8NGP9 310 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 FLVCR1-AS1Q8TAF5 88 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 ELMO1Q92556 727 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 CLIP3Q96DZ5 547 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 RNF31Q96EP0 1072 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 IP6K3Q96PC2 410 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 OR2A14Q96R47 310 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 HGH1Q9BTY7 390 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 SLC25A23Q9BV35 468 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 TSSK1BQ9BXA7 367 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 TRIM55Q9BYV6 548 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 ING2Q9H160 280 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 KCNF1Q9H3M0 494 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 ETNK1Q9HBU6 452 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 CASS4Q9NQ75 786 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 ACSS2Q9NR19 701 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 EIF2B3Q9NR50 452 aaKnown RBP6.39□□□□□ -1.39
SLIRP-203ENST00000554074 ENAMQ9NRM1 1142 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 GUCA1BQ9UMX6 200 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 SNX7Q9UNH6 387 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 SRPK3Q9UPE1 567 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 ASF1AQ9Y294 204 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 PADI2Q9Y2J8 665 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 JRKLQ9Y4A0 524 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 ZNF451Q9Y4E5 1061 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 PRSS21Q9Y6M0 314 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 CAPN6Q9Y6Q1 641 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 SVILO95425 2214 aa6.39□□□□□ -1.39
SLIRP-203ENST00000554074 A0A0J9YY10 115 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 CCDC78A2IDD5 438 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 OR51F1A6NGY5 319 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 ARGFXA6NJG6 315 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 E7EVH7 732 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 AP3B1O00203 1094 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 ZNF749O43361 778 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 KIF5CO60282 957 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 KLHL41O60662 606 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 GPC4O75487 556 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 KLF7O75840 302 aaPredicted RBP6.38□□□□□ -1.39
SLIRP-203ENST00000554074 DNAJB5O75953 348 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 OR2B3O76000 313 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 SORBS2O94875 1100 aaKnown RBP6.38□□□□□ -1.39
SLIRP-203ENST00000554074 FKBP9O95302 570 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 GOT2P00505 430 aaKnown RBP6.38□□□□□ -1.39
SLIRP-203ENST00000554074 IGHEP01854 428 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms