RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 GRID2O43424 1007 aa7.53□□□□□ -1.2
ABCD4-220ENST00000553998 KIF1CO43896 1103 aaKnown RBP7.53□□□□□ -1.2
ABCD4-220ENST00000553998 ASMTLO95671 621 aa7.53□□□□□ -1.2
ABCD4-220ENST00000553998 SLC4A1P02730 911 aa7.53□□□□□ -1.2
ABCD4-220ENST00000553998 RAB40ALP0C0E4 278 aa7.53□□□□□ -1.2
ABCD4-220ENST00000553998 GPR89BP0CG08 455 aa7.53□□□□□ -1.2
ABCD4-220ENST00000553998 ACP5P13686 325 aa7.53□□□□□ -1.2
ABCD4-220ENST00000553998 GRNP28799 593 aaKnown RBP7.53□□□□□ -1.2
ABCD4-220ENST00000553998 RPL21P46778 160 aaKnown RBP7.53□□□□□ -1.2
ABCD4-220ENST00000553998 ITGA8P53708 1063 aa7.53□□□□□ -1.2
ABCD4-220ENST00000553998 ITGA1P56199 1179 aa7.53□□□□□ -1.2
ABCD4-220ENST00000553998 ARL4CP56559 192 aa7.53□□□□□ -1.2
ABCD4-220ENST00000553998 MRPS25P82663 173 aaKnown RBP7.53□□□□□ -1.2
ABCD4-220ENST00000553998 ACVR1Q04771 509 aa7.53□□□□□ -1.2
ABCD4-220ENST00000553998 CHAF1BQ13112 559 aa7.53□□□□□ -1.2
ABCD4-220ENST00000553998 ITGA9Q13797 1035 aa7.53□□□□□ -1.2
ABCD4-220ENST00000553998 NR6A1Q15406 480 aa7.53□□□□□ -1.2
ABCD4-220ENST00000553998 PLEKHN1Q494U1 663 aaPredicted RBP7.53□□□□□ -1.2
ABCD4-220ENST00000553998 TSTD2Q5T7W7 516 aa7.53□□□□□ -1.2
ABCD4-220ENST00000553998 CACHD1Q5VU97 1274 aa7.53□□□□□ -1.2
ABCD4-220ENST00000553998 FAM199XQ6PEV8 388 aaPredicted RBP7.53□□□□□ -1.2
ABCD4-220ENST00000553998 ABRAXAS1Q6UWZ7 409 aa7.53□□□□□ -1.2
ABCD4-220ENST00000553998 IGFL3Q6UXB1 125 aa7.53□□□□□ -1.2
ABCD4-220ENST00000553998 WASH2PQ6VEQ5 465 aa7.53□□□□□ -1.2
ABCD4-220ENST00000553998 MED25Q71SY5 747 aa7.53□□□□□ -1.2
ABCD4-220ENST00000553998 TMEM102Q8N9M5 508 aaPredicted RBP7.53□□□□□ -1.2
ABCD4-220ENST00000553998 NOA1Q8NC60 698 aaKnown RBP7.53□□□□□ -1.2
ABCD4-220ENST00000553998 GPR26Q8NDV2 337 aa7.53□□□□□ -1.2
ABCD4-220ENST00000553998 OR4K2Q8NGD2 314 aa7.53□□□□□ -1.2
ABCD4-220ENST00000553998 UBXN4Q92575 508 aa7.53□□□□□ -1.2
ABCD4-220ENST00000553998 ZDHHC12Q96GR4 267 aa7.53□□□□□ -1.2
ABCD4-220ENST00000553998 SGSM3Q96HU1 749 aa7.53□□□□□ -1.2
ABCD4-220ENST00000553998 LRFN5Q96NI6 719 aa7.53□□□□□ -1.2
ABCD4-220ENST00000553998 VPS35Q96QK1 796 aa7.53□□□□□ -1.2
ABCD4-220ENST00000553998 NAT9Q9BTE0 207 aa7.53□□□□□ -1.2
ABCD4-220ENST00000553998 SPATA16Q9BXB7 569 aa7.53□□□□□ -1.2
ABCD4-220ENST00000553998 BPIFA1Q9NP55 256 aa7.53□□□□□ -1.2
ABCD4-220ENST00000553998 SLC40A1Q9NP59 571 aa7.53□□□□□ -1.2
ABCD4-220ENST00000553998 WASH6PQ9NQA3 447 aa7.53□□□□□ -1.2
ABCD4-220ENST00000553998 FAM114A2Q9NRY5 505 aa7.53□□□□□ -1.2
ABCD4-220ENST00000553998 ASF1BQ9NVP2 202 aa7.53□□□□□ -1.2
ABCD4-220ENST00000553998 SMOXQ9NWM0 555 aa7.53□□□□□ -1.2
ABCD4-220ENST00000553998 PIH1D1Q9NWS0 290 aaKnown RBP7.53□□□□□ -1.2
ABCD4-220ENST00000553998 GRHL1Q9NZI5 618 aa7.53□□□□□ -1.2
ABCD4-220ENST00000553998 SAMD15Q9P1V8 674 aa7.53□□□□□ -1.2
ABCD4-220ENST00000553998 RARRES3Q9UL19 164 aa7.53□□□□□ -1.2
ABCD4-220ENST00000553998 SOX13Q9UN79 622 aa7.53□□□□□ -1.2
ABCD4-220ENST00000553998 ANKUB1A6NFN9 424 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 AGAP14A8MT82 685 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 FADS2P1A8MWK0 482 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 BHMG1C9JSJ3 638 aaPredicted RBP7.52□□□□□ -1.21
ABCD4-220ENST00000553998 BUD23O43709 281 aaKnown RBP7.52□□□□□ -1.21
ABCD4-220ENST00000553998 SNX2O60749 519 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 SRP72O76094 671 aaKnown RBP7.52□□□□□ -1.21
ABCD4-220ENST00000553998 TTC4O95801 387 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 VIPP01282 170 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 BRAFP15056 766 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 FOLR1P15328 257 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 TYRP1P17643 537 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 AMD1P17707 334 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 PAMP19021 973 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 ITGALP20701 1170 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 MGAT1P26572 445 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 TERF1P54274 439 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 RPS18P62269 152 aaKnown RBP7.52□□□□□ -1.21
ABCD4-220ENST00000553998 XIAPP98170 497 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 GUCY2DQ02846 1103 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 ACY1Q03154 408 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 HIF1AQ16665 826 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 KCTD19Q17RG1 926 aaPredicted RBP7.52□□□□□ -1.21
ABCD4-220ENST00000553998 GPR33Q49SQ1 333 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 AGAP9Q5VTM2 703 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 ALS2CLQ60I27 953 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 KIAA0930Q6ICG6 404 aaPredicted RBP7.52□□□□□ -1.21
ABCD4-220ENST00000553998 AFTPHQ6ULP2 937 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 CEP128Q6ZU80 1094 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 CENPUQ71F23 418 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 SNX20Q7Z614 316 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 KMT5CQ86Y97 462 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 PHYKPLQ8IUZ5 450 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 IQCKQ8N0W5 287 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 D2HGDHQ8N465 521 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 OR13C4Q8NGS5 318 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 OR13J1Q8NGT2 312 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 OR8K5Q8NH50 307 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 ZNF398Q8TD17 642 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 HEXDCQ8WVB3 486 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 RSC1A1Q92681 617 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 GLYATL1Q969I3 302 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 MARVELD3Q96A59 401 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 ULK4Q96C45 1275 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 RNF31Q96EP0 1072 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 CDKN2AIPNLQ96HQ2 116 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 ELMO2Q96JJ3 720 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 DNAJC1Q96KC8 554 aaKnown RBP7.52□□□□□ -1.21
ABCD4-220ENST00000553998 SIGLEC10Q96LC7 697 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 EBNA1BP2Q99848 306 aaKnown RBP7.52□□□□□ -1.21
ABCD4-220ENST00000553998 MFRPQ9BY79 579 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 TSPYL1Q9H0U9 437 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 DPH5Q9H2P9 285 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms