RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 ME2P23368 584 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 MAP4P27816 1152 aaKnown RBP7.15□□□□□ -1.26
ATXN3-221ENST00000553498 TEAD1P28347 426 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 VHLP40337 213 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 MTHFRP42898 656 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 TNFRSF4P43489 277 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 KRT6CP48668 564 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 EMX2Q04743 252 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 TRAP1Q12931 704 aaKnown RBP7.15□□□□□ -1.26
ATXN3-221ENST00000553498 ENPP2Q13822 863 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 LRP8Q14114 963 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 ZNF234Q14588 700 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 ACOX1Q15067 660 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 KIF19Q2TAC6 998 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 GAB4Q2WGN9 574 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 ITPRIPL2Q3MIP1 535 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 SAMD4BQ5PRF9 694 aaKnown RBP7.15□□□□□ -1.26
ATXN3-221ENST00000553498 IRAK1BP1Q5VVH5 260 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 TMEM198Q66K66 360 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 TRIM68Q6AZZ1 485 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 FAM109BQ6ICB4 259 aaPredicted RBP7.15□□□□□ -1.26
ATXN3-221ENST00000553498 Q6ZVL8 140 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 UBE2R2Q712K3 238 aaPredicted RBP7.15□□□□□ -1.26
ATXN3-221ENST00000553498 ERN2Q76MJ5 926 aaKnown RBP7.15□□□□□ -1.26
ATXN3-221ENST00000553498 PARS2Q7L3T8 475 aaKnown RBP7.15□□□□□ -1.26
ATXN3-221ENST00000553498 GET4Q7L5D6 327 aaPredicted RBP7.15□□□□□ -1.26
ATXN3-221ENST00000553498 GOLGA7Q7Z5G4 137 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 HSD11B1LQ7Z5J1 315 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 ARPINQ7Z6K5 226 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 MILR1Q7Z6M3 343 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 SYVN1Q86TM6 617 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 MYLK4Q86YV6 388 aaPredicted RBP7.15□□□□□ -1.26
ATXN3-221ENST00000553498 POU5F2Q8N7G0 328 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 C12orf76Q8N812 135 aaPredicted RBP7.15□□□□□ -1.26
ATXN3-221ENST00000553498 GOLM1Q8NBJ4 401 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 PPFIBP2Q8ND30 876 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 DNAJB8Q8NHS0 232 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 PIP4K2CQ8TBX8 421 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 METTL6Q8TCB7 284 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 TMEM159Q96B96 161 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 RCN3Q96D15 328 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 MOCOSQ96EN8 888 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 LINC00615Q96LM1 132 aaPredicted RBP7.15□□□□□ -1.26
ATXN3-221ENST00000553498 CCDC138Q96M89 665 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 FOPNLQ96NB1 174 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 NECTIN4Q96NY8 510 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 NSUN5Q96P11 429 aaKnown RBP7.15□□□□□ -1.26
ATXN3-221ENST00000553498 CCM2Q9BSQ5 444 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 RIOK2Q9BVS4 552 aaKnown RBP7.15□□□□□ -1.26
ATXN3-221ENST00000553498 ABCG8Q9H221 673 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 NKX2-4Q9H2Z4 354 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 MUC13Q9H3R2 512 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 EBF3Q9H4W6 596 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 NOL11Q9H8H0 719 aaKnown RBP7.15□□□□□ -1.26
ATXN3-221ENST00000553498 IPPKQ9H8X2 491 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 WDR41Q9HAD4 459 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 TNFRSF12AQ9NP84 129 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 SPAG4Q9NPE6 437 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 HPS4Q9NQG7 708 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 HEBP1Q9NRV9 189 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 AIG1Q9NVV5 245 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 CACNA2D2Q9NY47 1150 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 IKZF3Q9UKT9 509 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 GPR34Q9UPC5 381 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 POMPQ9Y244 141 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 AP3M1Q9Y2T2 418 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 FIS1Q9Y3D6 152 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 KCNMB2Q9Y691 235 aa7.15□□□□□ -1.26
ATXN3-221ENST00000553498 CHD5Q8TDI0 1954 aa7.15□□□□□ -1.27
ATXN3-221ENST00000553498 A0A1W2PP18 115 aa7.14□□□□□ -1.27
ATXN3-221ENST00000553498 FAM234BA2RU67 622 aa7.14□□□□□ -1.27
ATXN3-221ENST00000553498 KRBA1A5PL33 1030 aa7.14□□□□□ -1.27
ATXN3-221ENST00000553498 NCF1BA6NI72 391 aaPredicted RBP7.14□□□□□ -1.27
ATXN3-221ENST00000553498 NCF1CA8MVU1 366 aaPredicted RBP7.14□□□□□ -1.27
ATXN3-221ENST00000553498 MEI4A8MW99 385 aa7.14□□□□□ -1.27
ATXN3-221ENST00000553498 A8MX80 341 aa7.14□□□□□ -1.27
ATXN3-221ENST00000553498 TRIM38O00635 465 aa7.14□□□□□ -1.27
ATXN3-221ENST00000553498 OR7A17O14581 309 aa7.14□□□□□ -1.27
ATXN3-221ENST00000553498 ANGPT2O15123 496 aa7.14□□□□□ -1.27
ATXN3-221ENST00000553498 TRIM24O15164 1050 aa7.14□□□□□ -1.27
ATXN3-221ENST00000553498 TAPBPO15533 448 aa7.14□□□□□ -1.27
ATXN3-221ENST00000553498 GPR39O43194 453 aa7.14□□□□□ -1.27
ATXN3-221ENST00000553498 DNAJA2O60884 412 aa7.14□□□□□ -1.27
ATXN3-221ENST00000553498 ULK1O75385 1050 aa7.14□□□□□ -1.27
ATXN3-221ENST00000553498 PSIP1O75475 530 aaKnown RBP7.14□□□□□ -1.27
ATXN3-221ENST00000553498 KAT7O95251 611 aa7.14□□□□□ -1.27
ATXN3-221ENST00000553498 CLDN9O95484 217 aa7.14□□□□□ -1.27
ATXN3-221ENST00000553498 CATP04040 527 aaKnown RBP7.14□□□□□ -1.27
ATXN3-221ENST00000553498 CAPN1P07384 714 aa7.14□□□□□ -1.27
ATXN3-221ENST00000553498 ADRB3P13945 408 aa7.14□□□□□ -1.27
ATXN3-221ENST00000553498 NCF1P14598 390 aaPredicted RBP7.14□□□□□ -1.27
ATXN3-221ENST00000553498 GM2AP17900 193 aa7.14□□□□□ -1.27
ATXN3-221ENST00000553498 ALAS2P22557 587 aa7.14□□□□□ -1.27
ATXN3-221ENST00000553498 PRPH2P23942 346 aa7.14□□□□□ -1.27
ATXN3-221ENST00000553498 HMOX2P30519 316 aa7.14□□□□□ -1.27
ATXN3-221ENST00000553498 BMP8BP34820 402 aa7.14□□□□□ -1.27
ATXN3-221ENST00000553498 GJA4P35212 333 aa7.14□□□□□ -1.27
ATXN3-221ENST00000553498 ETV3P41162 512 aa7.14□□□□□ -1.27
ATXN3-221ENST00000553498 SLC6A12P48065 614 aa7.14□□□□□ -1.27
ATXN3-221ENST00000553498 AGTR2P50052 363 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms