RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 CDH3P22223 829 aa11.48□□□□□ -0.57
CKAP4-202ENST00000552828 FDFT1P37268 417 aa11.48□□□□□ -0.57
CKAP4-202ENST00000552828 HADHAP40939 763 aa11.48□□□□□ -0.57
CKAP4-202ENST00000552828 KCNJ1P48048 391 aa11.48□□□□□ -0.57
CKAP4-202ENST00000552828 PREPP48147 710 aa11.48□□□□□ -0.57
CKAP4-202ENST00000552828 CD151P48509 253 aa11.48□□□□□ -0.57
CKAP4-202ENST00000552828 PRLHRP49683 370 aa11.48□□□□□ -0.57
CKAP4-202ENST00000552828 RRADP55042 308 aa11.48□□□□□ -0.57
CKAP4-202ENST00000552828 NCF4Q15080 339 aa11.48□□□□□ -0.57
CKAP4-202ENST00000552828 EIF2S3LQ2VIR3 472 aaKnown RBP11.48□□□□□ -0.57
CKAP4-202ENST00000552828 PRR30Q53SZ7 412 aaPredicted RBP11.48□□□□□ -0.57
CKAP4-202ENST00000552828 FAM69BQ5VUD6 431 aa11.48□□□□□ -0.57
CKAP4-202ENST00000552828 ZNF385CQ66K41 422 aaPredicted RBP11.48□□□□□ -0.57
CKAP4-202ENST00000552828 C4orf22Q6V702 233 aa11.48□□□□□ -0.57
CKAP4-202ENST00000552828 KLHDC8BQ8IXV7 354 aa11.48□□□□□ -0.57
CKAP4-202ENST00000552828 C17orf53Q8N3J3 647 aaPredicted RBP11.48□□□□□ -0.57
CKAP4-202ENST00000552828 TAB3Q8N5C8 712 aaPredicted RBP11.48□□□□□ -0.57
CKAP4-202ENST00000552828 OR4K2Q8NGD2 314 aa11.48□□□□□ -0.57
CKAP4-202ENST00000552828 HM13Q8TCT9 377 aa11.48□□□□□ -0.57
CKAP4-202ENST00000552828 NAT14Q8WUY8 206 aa11.48□□□□□ -0.57
CKAP4-202ENST00000552828 HEXDCQ8WVB3 486 aa11.48□□□□□ -0.57
CKAP4-202ENST00000552828 LCN9Q8WX39 176 aa11.48□□□□□ -0.57
CKAP4-202ENST00000552828 MAGOHBQ96A72 148 aaKnown RBP11.48□□□□□ -0.57
CKAP4-202ENST00000552828 TBL1YQ9BQ87 522 aa11.48□□□□□ -0.57
CKAP4-202ENST00000552828 APOL2Q9BQE5 337 aa11.48□□□□□ -0.57
CKAP4-202ENST00000552828 DHRS4Q9BTZ2 278 aa11.48□□□□□ -0.57
CKAP4-202ENST00000552828 OR52A5Q9H2C5 316 aa11.48□□□□□ -0.57
CKAP4-202ENST00000552828 SRMSQ9H3Y6 488 aa11.48□□□□□ -0.57
CKAP4-202ENST00000552828 LRRC40Q9H9A6 602 aa11.48□□□□□ -0.57
CKAP4-202ENST00000552828 SLAMF7Q9NQ25 335 aa11.48□□□□□ -0.57
CKAP4-202ENST00000552828 GPR83Q9NYM4 423 aa11.48□□□□□ -0.57
CKAP4-202ENST00000552828 FEZ2Q9UHY8 353 aaPredicted RBP11.48□□□□□ -0.57
CKAP4-202ENST00000552828 FKBPLQ9UIM3 349 aa11.48□□□□□ -0.57
CKAP4-202ENST00000552828 SERTAD3Q9UJW9 196 aa11.48□□□□□ -0.57
CKAP4-202ENST00000552828 SAR1BQ9Y6B6 198 aa11.48□□□□□ -0.57
CKAP4-202ENST00000552828 SHANK1Q9Y566 2161 aa11.48□□□□□ -0.57
CKAP4-202ENST00000552828 MED13Q9UHV7 2174 aa11.47□□□□□ -0.57
CKAP4-202ENST00000552828 IGLV3-16A0A075B6K0 115 aa11.47□□□□□ -0.57
CKAP4-202ENST00000552828 E7EVH7 732 aa11.47□□□□□ -0.57
CKAP4-202ENST00000552828 BTN3A3O00478 584 aa11.47□□□□□ -0.57
CKAP4-202ENST00000552828 BTN3A1O00481 513 aa11.47□□□□□ -0.57
CKAP4-202ENST00000552828 MAP3K7O43318 606 aa11.47□□□□□ -0.57
CKAP4-202ENST00000552828 CBX6O95503 412 aa11.47□□□□□ -0.57
CKAP4-202ENST00000552828 AP2A1O95782 977 aa11.47□□□□□ -0.57
CKAP4-202ENST00000552828 HBQ1P09105 142 aa11.47□□□□□ -0.57
CKAP4-202ENST00000552828 RALBP11234 206 aa11.47□□□□□ -0.57
CKAP4-202ENST00000552828 ETS1P14921 441 aa11.47□□□□□ -0.57
CKAP4-202ENST00000552828 ST6GAL1P15907 406 aa11.47□□□□□ -0.57
CKAP4-202ENST00000552828 CYP2A7P20853 494 aa11.47□□□□□ -0.57
CKAP4-202ENST00000552828 LMAN1P49257 510 aa11.47□□□□□ -0.57
CKAP4-202ENST00000552828 MRPL49Q13405 166 aaKnown RBP11.47□□□□□ -0.57
CKAP4-202ENST00000552828 ATP1A4Q13733 1029 aa11.47□□□□□ -0.57
CKAP4-202ENST00000552828 SPARCL1Q14515 664 aa11.47□□□□□ -0.57
CKAP4-202ENST00000552828 KRT33BQ14525 404 aa11.47□□□□□ -0.57
CKAP4-202ENST00000552828 KCTD11Q693B1 232 aa11.47□□□□□ -0.57
CKAP4-202ENST00000552828 IGFL3Q6UXB1 125 aa11.47□□□□□ -0.57
CKAP4-202ENST00000552828 LINC00523Q86TU6 105 aa11.47□□□□□ -0.57
CKAP4-202ENST00000552828 NXPE1Q8N323 547 aa11.47□□□□□ -0.57
CKAP4-202ENST00000552828 ULK4Q96C45 1275 aa11.47□□□□□ -0.57
CKAP4-202ENST00000552828 DCUN1D1Q96GG9 259 aa11.47□□□□□ -0.57
CKAP4-202ENST00000552828 IP6K3Q96PC2 410 aa11.47□□□□□ -0.57
CKAP4-202ENST00000552828 TRAPPC9Q96Q05 1148 aa11.47□□□□□ -0.57
CKAP4-202ENST00000552828 MFRPQ9BY79 579 aa11.47□□□□□ -0.57
CKAP4-202ENST00000552828 SLC29A3Q9BZD2 475 aa11.47□□□□□ -0.57
CKAP4-202ENST00000552828 CHRNA10Q9GZZ6 450 aa11.47□□□□□ -0.57
CKAP4-202ENST00000552828 MVB12BQ9H7P6 319 aa11.47□□□□□ -0.57
CKAP4-202ENST00000552828 ETNK1Q9HBU6 452 aa11.47□□□□□ -0.57
CKAP4-202ENST00000552828 ARNT2Q9HBZ2 717 aa11.47□□□□□ -0.57
CKAP4-202ENST00000552828 RAB6BQ9NRW1 208 aa11.47□□□□□ -0.57
CKAP4-202ENST00000552828 HIVEP3Q5T1R4 2406 aa11.47□□□□□ -0.57
CKAP4-202ENST00000552828 CREBBPQ92793 2442 aa11.47□□□□□ -0.57
CKAP4-202ENST00000552828 TNRC6AQ8NDV7 1962 aaKnown RBP11.47□□□□□ -0.57
CKAP4-202ENST00000552828 CSMD1Q96PZ7 3565 aa11.46□□□□□ -0.57
CKAP4-202ENST00000552828 GSAPA4D1B5 854 aa11.46□□□□□ -0.57
CKAP4-202ENST00000552828 A6NL46 340 aa11.46□□□□□ -0.57
CKAP4-202ENST00000552828 E7EQ34 232 aa11.46□□□□□ -0.57
CKAP4-202ENST00000552828 H3BMH7 237 aa11.46□□□□□ -0.57
CKAP4-202ENST00000552828 ZNF749O43361 778 aa11.46□□□□□ -0.57
CKAP4-202ENST00000552828 CRTAMO95727 393 aa11.46□□□□□ -0.57
CKAP4-202ENST00000552828 ZSCAN5DPP0CG00 497 aa11.46□□□□□ -0.57
CKAP4-202ENST00000552828 ATP1B2P14415 290 aaPredicted RBP11.46□□□□□ -0.57
CKAP4-202ENST00000552828 CASQ1P31415 396 aa11.46□□□□□ -0.57
CKAP4-202ENST00000552828 RPL22P35268 128 aaKnown RBP11.46□□□□□ -0.57
CKAP4-202ENST00000552828 COILP38432 576 aaPredicted RBP11.46□□□□□ -0.57
CKAP4-202ENST00000552828 ZNF140P52738 457 aaPredicted RBP11.46□□□□□ -0.57
CKAP4-202ENST00000552828 ETF1P62495 437 aaKnown RBP11.46□□□□□ -0.57
CKAP4-202ENST00000552828 RPA4Q13156 261 aa11.46□□□□□ -0.57
CKAP4-202ENST00000552828 OLIG2Q13516 323 aa11.46□□□□□ -0.57
CKAP4-202ENST00000552828 ESPL1Q14674 2120 aa11.46□□□□□ -0.57
CKAP4-202ENST00000552828 SSPNQ14714 243 aa11.46□□□□□ -0.57
CKAP4-202ENST00000552828 CYP1B1Q16678 543 aa11.46□□□□□ -0.57
CKAP4-202ENST00000552828 PTCHD3Q3KNS1 767 aa11.46□□□□□ -0.57
CKAP4-202ENST00000552828 PLEKHN1Q494U1 663 aaPredicted RBP11.46□□□□□ -0.57
CKAP4-202ENST00000552828 GPR33Q49SQ1 333 aa11.46□□□□□ -0.57
CKAP4-202ENST00000552828 CRB2Q5IJ48 1285 aa11.46□□□□□ -0.57
CKAP4-202ENST00000552828 VWA5B1Q5TIE3 1220 aa11.46□□□□□ -0.57
CKAP4-202ENST00000552828 DENND5AQ6IQ26 1287 aa11.46□□□□□ -0.57
CKAP4-202ENST00000552828 CDHR3Q6ZTQ4 885 aa11.46□□□□□ -0.57
CKAP4-202ENST00000552828 SNX20Q7Z614 316 aa11.46□□□□□ -0.57
CKAP4-202ENST00000552828 PRUNE1Q86TP1 453 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms