RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 PCDHB18PQ96TA0 734 aa11.93□□□□□ -0.5
SNRPF-204ENST00000552085 MESP1Q9BRJ9 268 aa11.93□□□□□ -0.5
SNRPF-204ENST00000552085 WWP1Q9H0M0 922 aa11.93□□□□□ -0.5
SNRPF-204ENST00000552085 VPS16Q9H269 839 aa11.93□□□□□ -0.5
SNRPF-204ENST00000552085 SRMSQ9H3Y6 488 aa11.93□□□□□ -0.5
SNRPF-204ENST00000552085 DEF6Q9H4E7 631 aa11.93□□□□□ -0.5
SNRPF-204ENST00000552085 NEUROD4Q9HD90 331 aa11.93□□□□□ -0.5
SNRPF-204ENST00000552085 NFKBIL1Q9UBC1 381 aaPredicted RBP11.93□□□□□ -0.5
SNRPF-204ENST00000552085 NXT1Q9UKK6 140 aaKnown RBP11.93□□□□□ -0.5
SNRPF-204ENST00000552085 RPL26L1Q9UNX3 145 aaKnown RBP11.93□□□□□ -0.5
SNRPF-204ENST00000552085 IDSB3KWA1 339 aa11.92□□□□□ -0.5
SNRPF-204ENST00000552085 BTN3A3O00478 584 aa11.92□□□□□ -0.5
SNRPF-204ENST00000552085 BTN3A1O00481 513 aa11.92□□□□□ -0.5
SNRPF-204ENST00000552085 WFS1O76024 890 aa11.92□□□□□ -0.5
SNRPF-204ENST00000552085 F12P00748 615 aaPredicted RBP11.92□□□□□ -0.5
SNRPF-204ENST00000552085 SERPINA7P05543 415 aa11.92□□□□□ -0.5
SNRPF-204ENST00000552085 TPOP07202 933 aa11.92□□□□□ -0.5
SNRPF-204ENST00000552085 CTSBP07858 339 aa11.92□□□□□ -0.5
SNRPF-204ENST00000552085 ALAS2P22557 587 aa11.92□□□□□ -0.5
SNRPF-204ENST00000552085 CA4P22748 312 aa11.92□□□□□ -0.5
SNRPF-204ENST00000552085 NDUFS1P28331 727 aa11.92□□□□□ -0.5
SNRPF-204ENST00000552085 GABRA4P48169 554 aa11.92□□□□□ -0.5
SNRPF-204ENST00000552085 CDH6P55285 790 aa11.92□□□□□ -0.5
SNRPF-204ENST00000552085 HSF1Q00613 529 aa11.92□□□□□ -0.5
SNRPF-204ENST00000552085 KEAP1Q14145 624 aa11.92□□□□□ -0.5
SNRPF-204ENST00000552085 METRNLQ641Q3 311 aa11.92□□□□□ -0.5
SNRPF-204ENST00000552085 ATG9BQ674R7 924 aa11.92□□□□□ -0.5
SNRPF-204ENST00000552085 TMEM211Q6ICI0 200 aa11.92□□□□□ -0.5
SNRPF-204ENST00000552085 CIARTQ8N365 385 aaPredicted RBP11.92□□□□□ -0.5
SNRPF-204ENST00000552085 C19orf47Q8N9M1 422 aaKnown RBP11.92□□□□□ -0.5
SNRPF-204ENST00000552085 MYRIPQ8NFW9 859 aa11.92□□□□□ -0.5
SNRPF-204ENST00000552085 LCN9Q8WX39 176 aa11.92□□□□□ -0.5
SNRPF-204ENST00000552085 TMEM158Q8WZ71 300 aa11.92□□□□□ -0.5
SNRPF-204ENST00000552085 PWWP2AQ96N64 755 aa11.92□□□□□ -0.5
SNRPF-204ENST00000552085 TRIM51Q9BSJ1 452 aa11.92□□□□□ -0.5
SNRPF-204ENST00000552085 POLR1EQ9GZS1 481 aaKnown RBP11.92□□□□□ -0.5
SNRPF-204ENST00000552085 GANQ9H2C0 597 aa11.92□□□□□ -0.5
SNRPF-204ENST00000552085 PCDH9Q9HC56 1237 aa11.92□□□□□ -0.5
SNRPF-204ENST00000552085 RAD18Q9NS91 495 aa11.92□□□□□ -0.5
SNRPF-204ENST00000552085 IRAK4Q9NWZ3 460 aa11.92□□□□□ -0.5
SNRPF-204ENST00000552085 COLEC10Q9Y6Z7 277 aa11.92□□□□□ -0.5
SNRPF-204ENST00000552085 HRNRQ86YZ3 2850 aaPredicted RBP11.92□□□□□ -0.5
SNRPF-204ENST00000552085 SNRNP200O75643 2136 aaKnown RBP11.92□□□□□ -0.5
SNRPF-204ENST00000552085 TLN2Q9Y4G6 2542 aa11.91□□□□□ -0.5
SNRPF-204ENST00000552085 NSG1A0A0A6YYJ2 146 aa11.91□□□□□ -0.5
SNRPF-204ENST00000552085 TTI1O43156 1089 aa11.91□□□□□ -0.5
SNRPF-204ENST00000552085 ONECUT2O95948 504 aa11.91□□□□□ -0.5
SNRPF-204ENST00000552085 NSG1P42857 185 aa11.91□□□□□ -0.5
SNRPF-204ENST00000552085 NKX6-1P78426 367 aaPredicted RBP11.91□□□□□ -0.5
SNRPF-204ENST00000552085 DSC2Q02487 901 aa11.91□□□□□ -0.5
SNRPF-204ENST00000552085 KRT33BQ14525 404 aa11.91□□□□□ -0.5
SNRPF-204ENST00000552085 QPCTQ16769 361 aa11.91□□□□□ -0.5
SNRPF-204ENST00000552085 LCE2DQ5TA82 110 aaPredicted RBP11.91□□□□□ -0.5
SNRPF-204ENST00000552085 DCUN1D2Q6PH85 259 aa11.91□□□□□ -0.5
SNRPF-204ENST00000552085 C16orf47Q6ZP98 133 aaPredicted RBP11.91□□□□□ -0.5
SNRPF-204ENST00000552085 COX15Q7KZN9 410 aa11.91□□□□□ -0.5
SNRPF-204ENST00000552085 SIAH3Q8IW03 269 aa11.91□□□□□ -0.5
SNRPF-204ENST00000552085 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.91□□□□□ -0.5
SNRPF-204ENST00000552085 TEX26Q8N6G2 289 aa11.91□□□□□ -0.5
SNRPF-204ENST00000552085 ACVR1CQ8NER5 493 aa11.91□□□□□ -0.5
SNRPF-204ENST00000552085 BRSK1Q8TDC3 778 aa11.91□□□□□ -0.5
SNRPF-204ENST00000552085 RND1Q92730 232 aa11.91□□□□□ -0.5
SNRPF-204ENST00000552085 DLG3Q92796 817 aa11.91□□□□□ -0.5
SNRPF-204ENST00000552085 TTC25Q96NG3 672 aa11.91□□□□□ -0.5
SNRPF-204ENST00000552085 VPS35Q96QK1 796 aa11.91□□□□□ -0.5
SNRPF-204ENST00000552085 KCTD15Q96SI1 283 aaPredicted RBP11.91□□□□□ -0.5
SNRPF-204ENST00000552085 ZFYVE1Q9HBF4 777 aa11.91□□□□□ -0.5
SNRPF-204ENST00000552085 TMPRSS11EQ9UL52 423 aa11.91□□□□□ -0.5
SNRPF-204ENST00000552085 ASB1Q9Y576 335 aa11.91□□□□□ -0.5
SNRPF-204ENST00000552085 DNMT3AQ9Y6K1 912 aaPredicted RBP11.91□□□□□ -0.5
SNRPF-204ENST00000552085 A0A1B0GX78 115 aa11.9□□□□□ -0.5
SNRPF-204ENST00000552085 ASPDHA6ND91 283 aa11.9□□□□□ -0.5
SNRPF-204ENST00000552085 C2orf74A8MZ97 194 aa11.9□□□□□ -0.5
SNRPF-204ENST00000552085 ANKRD66B4E2M5 251 aa11.9□□□□□ -0.5
SNRPF-204ENST00000552085 H7C1Q1 480 aa11.9□□□□□ -0.5
SNRPF-204ENST00000552085 PES1O00541 588 aaKnown RBP11.9□□□□□ -0.5
SNRPF-204ENST00000552085 CRLF1O75462 422 aa11.9□□□□□ -0.5
SNRPF-204ENST00000552085 PBLDP30039 288 aaPredicted RBP11.9□□□□□ -0.5
SNRPF-204ENST00000552085 CARSP49589 748 aaKnown RBP11.9□□□□□ -0.5
SNRPF-204ENST00000552085 RAB28P51157 221 aa11.9□□□□□ -0.5
SNRPF-204ENST00000552085 OGDHQ02218 1023 aa11.9□□□□□ -0.5
SNRPF-204ENST00000552085 DPYSQ14117 519 aa11.9□□□□□ -0.5
SNRPF-204ENST00000552085 TFDP3Q5H9I0 405 aa11.9□□□□□ -0.5
SNRPF-204ENST00000552085 PPP6R3Q5H9R7 873 aaPredicted RBP11.9□□□□□ -0.5
SNRPF-204ENST00000552085 ABHD17BQ5VST6 288 aa11.9□□□□□ -0.5
SNRPF-204ENST00000552085 TTLL10Q6ZVT0 673 aa11.9□□□□□ -0.5
SNRPF-204ENST00000552085 NDUFAF7Q7L592 441 aa11.9□□□□□ -0.5
SNRPF-204ENST00000552085 FGD2Q7Z6J4 655 aa11.9□□□□□ -0.5
SNRPF-204ENST00000552085 HOOK3Q86VS8 718 aa11.9□□□□□ -0.5
SNRPF-204ENST00000552085 ATPAF2Q8N5M1 289 aa11.9□□□□□ -0.5
SNRPF-204ENST00000552085 BEND7Q8N7W2 519 aaPredicted RBP11.9□□□□□ -0.5
SNRPF-204ENST00000552085 GDAP1Q8TB36 358 aa11.9□□□□□ -0.5
SNRPF-204ENST00000552085 C8orf44Q96CB5 159 aa11.9□□□□□ -0.5
SNRPF-204ENST00000552085 CRB3Q9BUF7 120 aa11.9□□□□□ -0.5
SNRPF-204ENST00000552085 CTSFQ9UBX1 484 aa11.9□□□□□ -0.5
SNRPF-204ENST00000552085 VSTM2BA6NLU5 285 aa11.89□□□□□ -0.51
SNRPF-204ENST00000552085 SLC35G4P0C7Q5 338 aa11.89□□□□□ -0.51
SNRPF-204ENST00000552085 COX6A1P12074 109 aa11.89□□□□□ -0.51
SNRPF-204ENST00000552085 CES1P23141 567 aa11.89□□□□□ -0.51
SNRPF-204ENST00000552085 EEF1GP26641 437 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms