RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 MACROD2A1Z1Q3 448 aa6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 GOLGA6L3A6NEY3 463 aa6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 TLCD2A6NGC4 264 aa6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 OR51F1A6NGY5 319 aa6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 STX7O15400 261 aaKnown RBP6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 ZNF749O43361 778 aa6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 AKR1B10O60218 316 aa6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 ANKRD17O75179 2603 aaKnown RBP6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 TMEM63AO94886 807 aa6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 PRAMEF1O95521 474 aa6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 TPBGLP0DKB5 382 aa6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 EPXP11678 715 aa6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 EDN3P14138 238 aa6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 ACPPP15309 386 aa6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 HLA-DPA1P20036 260 aa6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 MSH3P20585 1137 aa6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 PSMB4P28070 264 aa6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 RBL1P28749 1068 aa6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 ANP32AP39687 249 aaKnown RBP6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 DCTP40126 519 aa6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 TUBB4BP68371 445 aa6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 TUBB2AQ13885 445 aa6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 KRT33BQ14525 404 aa6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 SLC18A3Q16572 532 aa6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 FIGNQ5HY92 759 aa6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 METRNLQ641Q3 311 aa6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 CCDC70Q6NSX1 233 aa6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 ARMC6Q6NXE6 501 aa6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 WASH2PQ6VEQ5 465 aa6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 ZNF517Q6ZMY9 492 aaPredicted RBP6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 CDHR3Q6ZTQ4 885 aa6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 TAX1BP1Q86VP1 789 aa6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 APLFQ8IW19 511 aaPredicted RBP6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 RAVER1Q8IY67 606 aaKnown RBP6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 SYTL1Q8IYJ3 562 aa6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 DSELQ8IZU8 1212 aa6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 D2HGDHQ8N465 521 aa6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 GALNT11Q8NCW6 608 aa6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 OR5AR1Q8NGP9 310 aa6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 FBF1Q8TES7 1133 aa6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 TFB1MQ8WVM0 346 aaKnown RBP6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 UBXN4Q92575 508 aa6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 SYN2Q92777 582 aaPredicted RBP6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 FATE1Q969F0 183 aa6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 SNRNP40Q96DI7 357 aaKnown RBP6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 VPS35Q96QK1 796 aa6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 TUBB2BQ9BVA1 445 aa6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 EPB41L1Q9H4G0 881 aa6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 ASB8Q9H765 288 aa6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 NHEJ1Q9H9Q4 299 aaPredicted RBP6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 SLAMF7Q9NQ25 335 aa6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 UVRAGQ9P2Y5 699 aa6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 EPHA6Q9UF33 1036 aa6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 AMACRQ9UHK6 382 aa6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 RSPH14Q9UHP6 348 aa6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 TCFL5Q9UL49 500 aa6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 BZW2Q9Y6E2 419 aaKnown RBP6.63□□□□□ -1.35
PRPF40B-214ENST00000551320 SNRNP200O75643 2136 aaKnown RBP6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 SETD2Q9BYW2 2564 aaPredicted RBP6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 MGAT4DA6NG13 374 aa6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 C21orf140B9A014 251 aa6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 GOLGA6L22H0YM25 854 aa6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 H7C0C1 242 aa6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 FFAR3O14843 346 aa6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 PPP1R12AO14974 1030 aaPredicted RBP6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 TOX3O15405 576 aaPredicted RBP6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 GPR42O15529 346 aa6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 SPOPO43791 374 aa6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 NRP2O60462 931 aa6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 WISP2O76076 250 aa6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 SRP72O76094 671 aaKnown RBP6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 ZBTB11O95625 1053 aaPredicted RBP6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 MBD3O95983 291 aa6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 F10P00742 488 aa6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 GHRHP01286 108 aa6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 SLC35G4P0C7Q5 338 aa6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 TMEM253P0C7T8 217 aa6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 PRF1P14222 555 aa6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 VCLP18206 1134 aa6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 CYP2A7P20853 494 aa6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 MCM3P25205 808 aa6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 PRDX3P30048 256 aaKnown RBP6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 RORAP35398 523 aa6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 HMGCLP35914 325 aa6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 GRIA3P42263 894 aa6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 ATP5OP48047 213 aa6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 XIAPP98170 497 aa6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 ACY1Q03154 408 aa6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 LYPD4Q6UWN0 246 aa6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 TAS2R42Q7RTR8 314 aa6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 SYVN1Q86TM6 617 aa6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 PRUNE1Q86TP1 453 aa6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 OOSP2Q86WS3 158 aa6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 PIANPQ8IYJ0 282 aa6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 SHISA5Q8N114 240 aa6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 ZNF655Q8N720 491 aaPredicted RBP6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 RNF214Q8ND24 703 aa6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 DDHD1Q8NEL9 900 aa6.62□□□□□ -1.35
PRPF40B-214ENST00000551320 OR52E1Q8NGJ3 308 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms