RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 CAVIN2O95810 425 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 GIMD1P0DJR0 217 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 SRCP12931 536 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 MYF5P13349 255 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 GM2AP17900 193 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 RFC1P35251 1148 aaPredicted RBP4.92□□□□□ -1.62
SCAF11-214ENST00000550893 CHKAP35790 457 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 ANP32AP39687 249 aaKnown RBP4.92□□□□□ -1.62
SCAF11-214ENST00000550893 PRKCIP41743 596 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 PTPN9P43378 593 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 ACADSBP45954 432 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 PTDSS1P48651 473 aaKnown RBP4.92□□□□□ -1.62
SCAF11-214ENST00000550893 ITGA8P53708 1063 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 CREB5Q02930 508 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 ZNF33AQ06730 810 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 GRIK2Q13002 908 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 POLD3Q15054 466 aaPredicted RBP4.92□□□□□ -1.62
SCAF11-214ENST00000550893 PIP5KL1Q5T9C9 394 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 N4BP2L1Q5TBK1 243 aaPredicted RBP4.92□□□□□ -1.62
SCAF11-214ENST00000550893 KCTD16Q68DU8 428 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 CAVIN1Q6NZI2 390 aaKnown RBP4.92□□□□□ -1.62
SCAF11-214ENST00000550893 DARS2Q6PI48 645 aaKnown RBP4.92□□□□□ -1.62
SCAF11-214ENST00000550893 SERPINA13PQ6UXR4 307 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 ZNF571Q7Z3V5 609 aaPredicted RBP4.92□□□□□ -1.62
SCAF11-214ENST00000550893 BCDIN3DQ7Z5W3 292 aaKnown RBP4.92□□□□□ -1.62
SCAF11-214ENST00000550893 LUZP1Q86V48 1076 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 GLCCI1Q86VQ1 547 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 FAM131BQ86XD5 332 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 MFN1Q8IWA4 741 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 GALNT4Q8N4A0 578 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 NPWQ8N729 165 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 WFIKKN2Q8TEU8 576 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 DDI1Q8WTU0 396 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 ARRDC3Q96B67 414 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 TMA16Q96EY4 203 aaKnown RBP4.92□□□□□ -1.62
SCAF11-214ENST00000550893 APIPQ96GX9 242 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 CCDC34Q96HJ3 373 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 BTN2A3PQ96KV6 586 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 CAMK1GQ96NX5 476 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 XPO6Q96QU8 1125 aaKnown RBP4.92□□□□□ -1.62
SCAF11-214ENST00000550893 FEM1AQ9BSK4 669 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 RTKNQ9BST9 563 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 GPR174Q9BXC1 333 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 NACA2Q9H009 215 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 PDFQ9HBH1 243 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 NRIP3Q9NQ35 241 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 VPS45Q9NRW7 570 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 DDIT4Q9NX09 232 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 LPAR3Q9UBY5 353 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 VPS51Q9UID3 782 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 GMEB2Q9UKD1 530 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 HS3ST2Q9Y278 367 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 BTBD3Q9Y2F9 522 aa4.92□□□□□ -1.62
SCAF11-214ENST00000550893 GCN1Q92616 2671 aaKnown RBP4.92□□□□□ -1.62
SCAF11-214ENST00000550893 SYNJ2BP-COX16A0A087WUM0 186 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 LY6G6EA0A0G2JKS1 128 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 SYCE3A1L190 88 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 LRRC53A6NM62 1247 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 E9PAM4 449 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 GOLGA8SH3BPF8 625 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 M0QYT0 321 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 TP73O15350 636 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 MED7O43513 233 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 HRGP04196 525 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 GYPCP04921 128 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 CYP2A6P11509 494 aaPredicted RBP4.91□□□□□ -1.62
SCAF11-214ENST00000550893 RRM1P23921 792 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 IL1R2P27930 398 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 EPHA3P29320 983 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 USP8P40818 1118 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 RGRP47804 291 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 DHPSP49366 369 aaPredicted RBP4.91□□□□□ -1.62
SCAF11-214ENST00000550893 HARS2P49590 506 aaKnown RBP4.91□□□□□ -1.62
SCAF11-214ENST00000550893 SULT1E1P49888 294 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 ADPRHP54922 357 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 TIRAPP58753 221 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 KRTAP10-11P60412 298 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 SUMO2P61956 95 aaKnown RBP4.91□□□□□ -1.62
SCAF11-214ENST00000550893 KLF9Q13886 244 aaPredicted RBP4.91□□□□□ -1.62
SCAF11-214ENST00000550893 ARHGEF7Q14155 803 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 GBX1Q14549 363 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 CST6Q15828 149 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 ASTE1Q2TB18 679 aaPredicted RBP4.91□□□□□ -1.62
SCAF11-214ENST00000550893 KLHL40Q2TBA0 621 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 ZNF750Q32MQ0 723 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 SLC25A52Q3SY17 297 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 SPDYCQ5MJ68 293 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 FAM182AQ5T1J6 154 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 LYSMD4Q5XG99 296 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 OR6B2Q6IFH4 312 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 PLEKHA7Q6IQ23 1121 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 WDR59Q6PJI9 974 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 KIAA1324Q6UXG2 1013 aaKnown RBP4.91□□□□□ -1.62
SCAF11-214ENST00000550893 LINGO4Q6UY18 593 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 DGLUCYQ7Z3D6 616 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 TADA2BQ86TJ2 420 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 ARHGAP12Q8IWW6 846 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 UNC45BQ8IWX7 931 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 MCOLN2Q8IZK6 566 aa4.91□□□□□ -1.62
SCAF11-214ENST00000550893 SLC22A18ASQ8N1D0 253 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms