RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 TTC23LQ6PF05 361 aa10.53□□□□□ -0.72
VTI1BP3-201ENST00000550220 UNC5AQ6ZN44 842 aa10.53□□□□□ -0.72
VTI1BP3-201ENST00000550220 ASB18Q6ZVZ8 466 aa10.53□□□□□ -0.72
VTI1BP3-201ENST00000550220 MED25Q71SY5 747 aa10.53□□□□□ -0.72
VTI1BP3-201ENST00000550220 LRRC6Q86X45 466 aa10.53□□□□□ -0.72
VTI1BP3-201ENST00000550220 TAB3Q8N5C8 712 aaPredicted RBP10.53□□□□□ -0.72
VTI1BP3-201ENST00000550220 TMEM102Q8N9M5 508 aaPredicted RBP10.53□□□□□ -0.72
VTI1BP3-201ENST00000550220 OR1L3Q8NH93 324 aa10.53□□□□□ -0.72
VTI1BP3-201ENST00000550220 GSDMBQ8TAX9 411 aa10.53□□□□□ -0.72
VTI1BP3-201ENST00000550220 C1orf54Q8WWF1 131 aa10.53□□□□□ -0.72
VTI1BP3-201ENST00000550220 PANX3Q96QZ0 392 aa10.53□□□□□ -0.72
VTI1BP3-201ENST00000550220 HGH1Q9BTY7 390 aa10.53□□□□□ -0.72
VTI1BP3-201ENST00000550220 IL22Q9GZX6 179 aa10.53□□□□□ -0.72
VTI1BP3-201ENST00000550220 EPN3Q9H201 632 aa10.53□□□□□ -0.72
VTI1BP3-201ENST00000550220 CHST8Q9H2A9 424 aa10.53□□□□□ -0.72
VTI1BP3-201ENST00000550220 PIH1D1Q9NWS0 290 aaKnown RBP10.53□□□□□ -0.72
VTI1BP3-201ENST00000550220 BFARQ9NZS9 450 aa10.53□□□□□ -0.72
VTI1BP3-201ENST00000550220 TP53TG5Q9Y2B4 290 aa10.53□□□□□ -0.72
VTI1BP3-201ENST00000550220 TCAF1Q9Y4C2 921 aa10.53□□□□□ -0.72
VTI1BP3-201ENST00000550220 PCDHGA9Q9Y5G4 932 aaKnown RBP10.53□□□□□ -0.72
VTI1BP3-201ENST00000550220 PRSS21Q9Y6M0 314 aa10.53□□□□□ -0.72
VTI1BP3-201ENST00000550220 A0A0J9YY10 115 aa10.52□□□□□ -0.73
VTI1BP3-201ENST00000550220 A0A0U1RQJ8 604 aa10.52□□□□□ -0.73
VTI1BP3-201ENST00000550220 BHMG1C9JSJ3 638 aaPredicted RBP10.52□□□□□ -0.73
VTI1BP3-201ENST00000550220 PRMT5O14744 637 aaPredicted RBP10.52□□□□□ -0.73
VTI1BP3-201ENST00000550220 OR2B3O76000 313 aa10.52□□□□□ -0.73
VTI1BP3-201ENST00000550220 FKBP9O95302 570 aa10.52□□□□□ -0.73
VTI1BP3-201ENST00000550220 FURINP09958 794 aa10.52□□□□□ -0.73
VTI1BP3-201ENST00000550220 PRSS56P0CW18 603 aa10.52□□□□□ -0.73
VTI1BP3-201ENST00000550220 RAB28P51157 221 aa10.52□□□□□ -0.73
VTI1BP3-201ENST00000550220 RRADP55042 308 aa10.52□□□□□ -0.73
VTI1BP3-201ENST00000550220 SARNPP82979 210 aaKnown RBP10.52□□□□□ -0.73
VTI1BP3-201ENST00000550220 FOXK1P85037 733 aa10.52□□□□□ -0.73
VTI1BP3-201ENST00000550220 TMED2Q15363 201 aa10.52□□□□□ -0.73
VTI1BP3-201ENST00000550220 SLC5A12Q1EHB4 618 aa10.52□□□□□ -0.73
VTI1BP3-201ENST00000550220 TLDC1Q6P9B6 456 aa10.52□□□□□ -0.73
VTI1BP3-201ENST00000550220 FBXO38Q6PIJ6 1188 aa10.52□□□□□ -0.73
VTI1BP3-201ENST00000550220 UNC5DQ6UXZ4 953 aa10.52□□□□□ -0.73
VTI1BP3-201ENST00000550220 CDHR3Q6ZTQ4 885 aa10.52□□□□□ -0.73
VTI1BP3-201ENST00000550220 GSTA5Q7RTV2 222 aa10.52□□□□□ -0.73
VTI1BP3-201ENST00000550220 SDCCAG8Q86SQ7 713 aaPredicted RBP10.52□□□□□ -0.73
VTI1BP3-201ENST00000550220 ATCAYQ86WG3 371 aa10.52□□□□□ -0.73
VTI1BP3-201ENST00000550220 SLC22A15Q8IZD6 547 aa10.52□□□□□ -0.73
VTI1BP3-201ENST00000550220 RAB42Q8N4Z0 105 aa10.52□□□□□ -0.73
VTI1BP3-201ENST00000550220 ENDOVQ8N8Q3 282 aaKnown RBP10.52□□□□□ -0.73
VTI1BP3-201ENST00000550220 C19orf47Q8N9M1 422 aaKnown RBP10.52□□□□□ -0.73
VTI1BP3-201ENST00000550220 SLC38A9Q8NBW4 561 aa10.52□□□□□ -0.73
VTI1BP3-201ENST00000550220 TRIM58Q8NG06 486 aa10.52□□□□□ -0.73
VTI1BP3-201ENST00000550220 OR5AR1Q8NGP9 310 aa10.52□□□□□ -0.73
VTI1BP3-201ENST00000550220 PROKR1Q8TCW9 393 aa10.52□□□□□ -0.73
VTI1BP3-201ENST00000550220 PPM1MQ96MI6 270 aa10.52□□□□□ -0.73
VTI1BP3-201ENST00000550220 AP1M1Q9BXS5 423 aa10.52□□□□□ -0.73
VTI1BP3-201ENST00000550220 ING2Q9H160 280 aa10.52□□□□□ -0.73
VTI1BP3-201ENST00000550220 XKR8Q9H6D3 395 aa10.52□□□□□ -0.73
VTI1BP3-201ENST00000550220 AKIRIN1Q9H9L7 192 aaPredicted RBP10.52□□□□□ -0.73
VTI1BP3-201ENST00000550220 CATSPERZQ9NTU4 200 aa10.52□□□□□ -0.73
VTI1BP3-201ENST00000550220 PCMTD2Q9NV79 361 aa10.52□□□□□ -0.73
VTI1BP3-201ENST00000550220 INTS7Q9NVH2 962 aaKnown RBP10.52□□□□□ -0.73
VTI1BP3-201ENST00000550220 TCFL5Q9UL49 500 aa10.52□□□□□ -0.73
VTI1BP3-201ENST00000550220 SRPK3Q9UPE1 567 aa10.52□□□□□ -0.73
VTI1BP3-201ENST00000550220 ICKQ9UPZ9 632 aa10.52□□□□□ -0.73
VTI1BP3-201ENST00000550220 ASH1LQ9NR48 2969 aaKnown RBP10.51□□□□□ -0.73
VTI1BP3-201ENST00000550220 MYO18BQ8IUG5 2567 aa10.51□□□□□ -0.73
VTI1BP3-201ENST00000550220 OR51F1A6NGY5 319 aa10.51□□□□□ -0.73
VTI1BP3-201ENST00000550220 PYCARD-AS1I3L0S3 204 aa10.51□□□□□ -0.73
VTI1BP3-201ENST00000550220 CD3EAPO15446 510 aaKnown RBP10.51□□□□□ -0.73
VTI1BP3-201ENST00000550220 ZNF749O43361 778 aa10.51□□□□□ -0.73
VTI1BP3-201ENST00000550220 OR1I1O60431 355 aa10.51□□□□□ -0.73
VTI1BP3-201ENST00000550220 GPC4O75487 556 aa10.51□□□□□ -0.73
VTI1BP3-201ENST00000550220 UGT2B7P16662 529 aa10.51□□□□□ -0.73
VTI1BP3-201ENST00000550220 VARSP26640 1264 aaKnown RBP10.51□□□□□ -0.73
VTI1BP3-201ENST00000550220 RPL22P35268 128 aaKnown RBP10.51□□□□□ -0.73
VTI1BP3-201ENST00000550220 GRIA1P42261 906 aa10.51□□□□□ -0.73
VTI1BP3-201ENST00000550220 PGDP52209 483 aa10.51□□□□□ -0.73
VTI1BP3-201ENST00000550220 HSPA14Q0VDF9 509 aa10.51□□□□□ -0.73
VTI1BP3-201ENST00000550220 ABRQ12979 859 aa10.51□□□□□ -0.73
VTI1BP3-201ENST00000550220 SNX1Q13596 522 aa10.51□□□□□ -0.73
VTI1BP3-201ENST00000550220 BRD3Q15059 726 aa10.51□□□□□ -0.73
VTI1BP3-201ENST00000550220 NCF4Q15080 339 aa10.51□□□□□ -0.73
VTI1BP3-201ENST00000550220 KYNUQ16719 465 aa10.51□□□□□ -0.73
VTI1BP3-201ENST00000550220 ZNF789Q5FWF6 425 aa10.51□□□□□ -0.73
VTI1BP3-201ENST00000550220 PAPD7Q5XG87 772 aaKnown RBP10.51□□□□□ -0.73
VTI1BP3-201ENST00000550220 TMEM135Q86UB9 458 aa10.51□□□□□ -0.73
VTI1BP3-201ENST00000550220 RAB43Q86YS6 212 aa10.51□□□□□ -0.73
VTI1BP3-201ENST00000550220 SYTL1Q8IYJ3 562 aa10.51□□□□□ -0.73
VTI1BP3-201ENST00000550220 MAGEC3Q8TD91 643 aa10.51□□□□□ -0.73
VTI1BP3-201ENST00000550220 NACC2Q96BF6 587 aa10.51□□□□□ -0.73
VTI1BP3-201ENST00000550220 RNF31Q96EP0 1072 aa10.51□□□□□ -0.73
VTI1BP3-201ENST00000550220 OR2A14Q96R47 310 aa10.51□□□□□ -0.73
VTI1BP3-201ENST00000550220 SLC25A23Q9BV35 468 aa10.51□□□□□ -0.73
VTI1BP3-201ENST00000550220 RAB11FIP5Q9BXF6 653 aa10.51□□□□□ -0.73
VTI1BP3-201ENST00000550220 CHRAC1Q9NRG0 131 aa10.51□□□□□ -0.73
VTI1BP3-201ENST00000550220 SLC2A6Q9UGQ3 507 aa10.51□□□□□ -0.73
VTI1BP3-201ENST00000550220 GPN3Q9UHW5 284 aaPredicted RBP10.51□□□□□ -0.73
VTI1BP3-201ENST00000550220 GNPTGQ9UJJ9 305 aa10.51□□□□□ -0.73
VTI1BP3-201ENST00000550220 PLCL2Q9UPR0 1127 aa10.51□□□□□ -0.73
VTI1BP3-201ENST00000550220 TDRKHQ9Y2W6 561 aaKnown RBP10.51□□□□□ -0.73
VTI1BP3-201ENST00000550220 ZNF451Q9Y4E5 1061 aa10.51□□□□□ -0.73
VTI1BP3-201ENST00000550220 BSNQ9UPA5 3926 aa10.51□□□□□ -0.73
VTI1BP3-201ENST00000550220 ARGFXA6NJG6 315 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms