RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 NKAIN1Q4KMZ8 207 aa9.51□□□□□ -0.89
TRAFD1-207ENST00000550051 TFDP3Q5H9I0 405 aa9.51□□□□□ -0.89
TRAFD1-207ENST00000550051 TLDC1Q6P9B6 456 aa9.51□□□□□ -0.89
TRAFD1-207ENST00000550051 ZNF449Q6P9G9 518 aa9.51□□□□□ -0.89
TRAFD1-207ENST00000550051 SPESP1Q6UW49 350 aa9.51□□□□□ -0.89
TRAFD1-207ENST00000550051 SNX20Q7Z614 316 aa9.51□□□□□ -0.89
TRAFD1-207ENST00000550051 ZC3H18Q86VM9 953 aaKnown RBP9.51□□□□□ -0.89
TRAFD1-207ENST00000550051 ZGRF1Q86YA3 2104 aa9.51□□□□□ -0.89
TRAFD1-207ENST00000550051 TFGQ92734 400 aaPredicted RBP9.51□□□□□ -0.89
TRAFD1-207ENST00000550051 RBM41Q96IZ5 413 aaKnown RBP9.51□□□□□ -0.89
TRAFD1-207ENST00000550051 OR2A14Q96R47 310 aa9.51□□□□□ -0.89
TRAFD1-207ENST00000550051 NRTNQ99748 197 aa9.51□□□□□ -0.89
TRAFD1-207ENST00000550051 KRTAP3-3Q9BYR6 98 aa9.51□□□□□ -0.89
TRAFD1-207ENST00000550051 KRTAP3-2Q9BYR7 98 aa9.51□□□□□ -0.89
TRAFD1-207ENST00000550051 SPRTNQ9H040 489 aaPredicted RBP9.51□□□□□ -0.89
TRAFD1-207ENST00000550051 COG4Q9H9E3 785 aa9.51□□□□□ -0.89
TRAFD1-207ENST00000550051 ARNT2Q9HBZ2 717 aa9.51□□□□□ -0.89
TRAFD1-207ENST00000550051 ZDHHC3Q9NYG2 299 aa9.51□□□□□ -0.89
TRAFD1-207ENST00000550051 FAM8A1Q9UBU6 413 aa9.51□□□□□ -0.89
TRAFD1-207ENST00000550051 RSPH14Q9UHP6 348 aa9.51□□□□□ -0.89
TRAFD1-207ENST00000550051 FKBPLQ9UIM3 349 aa9.51□□□□□ -0.89
TRAFD1-207ENST00000550051 ENTPD4Q9Y227 616 aa9.51□□□□□ -0.89
TRAFD1-207ENST00000550051 AAR2Q9Y312 384 aaKnown RBP9.51□□□□□ -0.89
TRAFD1-207ENST00000550051 ABCA12Q86UK0 2595 aa9.5□□□□□ -0.89
TRAFD1-207ENST00000550051 TEP1Q99973 2627 aaKnown RBP9.5□□□□□ -0.89
TRAFD1-207ENST00000550051 TRBV5-4A0A0C4DH59 114 aa9.5□□□□□ -0.89
TRAFD1-207ENST00000550051 LRRTM2O43300 516 aa9.5□□□□□ -0.89
TRAFD1-207ENST00000550051 AKR1B10O60218 316 aa9.5□□□□□ -0.89
TRAFD1-207ENST00000550051 CNOT3O75175 753 aaKnown RBP9.5□□□□□ -0.89
TRAFD1-207ENST00000550051 ZRANB2O95218 330 aaKnown RBP eCLIP9.5□□□□□ -0.89
TRAFD1-207ENST00000550051 COMTP21964 271 aa9.5□□□□□ -0.89
TRAFD1-207ENST00000550051 SHMT2P34897 504 aa9.5□□□□□ -0.89
TRAFD1-207ENST00000550051 PRKG2Q13237 762 aa9.5□□□□□ -0.89
TRAFD1-207ENST00000550051 ZRSR2Q15696 482 aaKnown RBP9.5□□□□□ -0.89
TRAFD1-207ENST00000550051 ZIC1Q15915 447 aa9.5□□□□□ -0.89
TRAFD1-207ENST00000550051 C1orf189Q5VU69 101 aa9.5□□□□□ -0.89
TRAFD1-207ENST00000550051 KAZNQ674X7 775 aa9.5□□□□□ -0.89
TRAFD1-207ENST00000550051 SP5Q6BEB4 398 aaPredicted RBP9.5□□□□□ -0.89
TRAFD1-207ENST00000550051 UNC5AQ6ZN44 842 aa9.5□□□□□ -0.89
TRAFD1-207ENST00000550051 LUZP1Q86V48 1076 aa9.5□□□□□ -0.89
TRAFD1-207ENST00000550051 HOOK3Q86VS8 718 aa9.5□□□□□ -0.89
TRAFD1-207ENST00000550051 SRRM1Q8IYB3 904 aaKnown RBP9.5□□□□□ -0.89
TRAFD1-207ENST00000550051 RCOR2Q8IZ40 523 aa9.5□□□□□ -0.89
TRAFD1-207ENST00000550051 DNAJC22Q8N4W6 341 aa9.5□□□□□ -0.89
TRAFD1-207ENST00000550051 C19orf47Q8N9M1 422 aaKnown RBP9.5□□□□□ -0.89
TRAFD1-207ENST00000550051 FLVCR1-AS1Q8TAF5 88 aa9.5□□□□□ -0.89
TRAFD1-207ENST00000550051 PPP4R1Q8TF05 950 aa9.5□□□□□ -0.89
TRAFD1-207ENST00000550051 N4BP2L2Q92802 583 aaPredicted RBP9.5□□□□□ -0.89
TRAFD1-207ENST00000550051 QKIQ96PU8 341 aaKnown RBP eCLIP9.5□□□□□ -0.89
TRAFD1-207ENST00000550051 DNAJC7Q99615 494 aa9.5□□□□□ -0.89
TRAFD1-207ENST00000550051 WDR77Q9BQA1 342 aaPredicted RBP9.5□□□□□ -0.89
TRAFD1-207ENST00000550051 GORASP1Q9BQQ3 440 aa9.5□□□□□ -0.89
TRAFD1-207ENST00000550051 KLHL25Q9H0H3 589 aa9.5□□□□□ -0.89
TRAFD1-207ENST00000550051 GBA3Q9H227 469 aa9.5□□□□□ -0.89
TRAFD1-207ENST00000550051 DEF6Q9H4E7 631 aa9.5□□□□□ -0.89
TRAFD1-207ENST00000550051 FAM96AQ9H5X1 160 aa9.5□□□□□ -0.89
TRAFD1-207ENST00000550051 XKR8Q9H6D3 395 aa9.5□□□□□ -0.89
TRAFD1-207ENST00000550051 VPS37BQ9H9H4 285 aa9.5□□□□□ -0.89
TRAFD1-207ENST00000550051 SLC22A11Q9NSA0 550 aa9.5□□□□□ -0.89
TRAFD1-207ENST00000550051 IGSF5Q9NSI5 407 aa9.5□□□□□ -0.89
TRAFD1-207ENST00000550051 OR6C2Q9NZP2 312 aa9.5□□□□□ -0.89
TRAFD1-207ENST00000550051 NDOR1Q9UHB4 597 aa9.5□□□□□ -0.89
TRAFD1-207ENST00000550051 POLG2Q9UHN1 485 aa9.5□□□□□ -0.89
TRAFD1-207ENST00000550051 CRLS1Q9UJA2 301 aa9.5□□□□□ -0.89
TRAFD1-207ENST00000550051 INTUQ9ULD6 942 aa9.5□□□□□ -0.89
TRAFD1-207ENST00000550051 SRPK3Q9UPE1 567 aa9.5□□□□□ -0.89
TRAFD1-207ENST00000550051 ICKQ9UPZ9 632 aa9.5□□□□□ -0.89
TRAFD1-207ENST00000550051 CDYLQ9Y232 598 aa9.5□□□□□ -0.89
TRAFD1-207ENST00000550051 CROCCQ5TZA2 2017 aa9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 hCG_1818297A0A087WSY0 165 aa9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 H7C0S8 307 aa9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 ZSCAN9O15535 394 aaPredicted RBP9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 PSTPIP1O43586 416 aa9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 ALBP02768 609 aa9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 TPBGLP0DKB5 382 aa9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 EDN3P14138 238 aa9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 UGT2B7P16662 529 aa9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 POU3F2P20265 443 aaPredicted RBP9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 ITGALP20701 1170 aa9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 MMP11P24347 488 aa9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 ITGA3P26006 1051 aa9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 ACADLP28330 430 aa9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 TSFMP43897 325 aaKnown RBP9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 GCGRP47871 477 aa9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 ZNF140P52738 457 aaPredicted RBP9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 HADHBP55084 474 aaKnown RBP9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 CYP2A13Q16696 494 aa9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 SLC5A12Q1EHB4 618 aa9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 PRAMEF13Q5VWM6 474 aa9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 B3GNTL1Q67FW5 361 aaPredicted RBP9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 ITPRIPL1Q6GPH6 555 aa9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 DENND5AQ6IQ26 1287 aa9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 RPUSD3Q6P087 351 aaKnown RBP9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 OVCH1Q7RTY7 1134 aa9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 KATNAL2Q8IYT4 538 aa9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 TBC1D21Q8IYX1 336 aa9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 ZNF655Q8N720 491 aaPredicted RBP9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 OR13C4Q8NGS5 318 aa9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 GRHL3Q8TE85 626 aa9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 DENND1AQ8TEH3 1009 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms