RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 OSBPL8Q9BZF1 889 aa12.43□□□□□ -0.42
PTCH1-218ENST00000548945 FAM96AQ9H5X1 160 aa12.43□□□□□ -0.42
PTCH1-218ENST00000548945 NLE1Q9NVX2 485 aaPredicted RBP12.43□□□□□ -0.42
PTCH1-218ENST00000548945 OR6C2Q9NZP2 312 aa12.43□□□□□ -0.42
PTCH1-218ENST00000548945 POLG2Q9UHN1 485 aa12.43□□□□□ -0.42
PTCH1-218ENST00000548945 SRPK3Q9UPE1 567 aa12.43□□□□□ -0.42
PTCH1-218ENST00000548945 ZGRF1Q86YA3 2104 aa12.43□□□□□ -0.42
PTCH1-218ENST00000548945 MACROD2A1Z1Q3 448 aa12.42□□□□□ -0.42
PTCH1-218ENST00000548945 WIPF3A6NGB9 483 aa12.42□□□□□ -0.42
PTCH1-218ENST00000548945 OR2B3O76000 313 aa12.42□□□□□ -0.42
PTCH1-218ENST00000548945 IPO13O94829 963 aaKnown RBP12.42□□□□□ -0.42
PTCH1-218ENST00000548945 TJP3O95049 919 aa12.42□□□□□ -0.42
PTCH1-218ENST00000548945 PVRP15151 417 aa12.42□□□□□ -0.42
PTCH1-218ENST00000548945 PSMA3P25788 255 aa12.42□□□□□ -0.42
PTCH1-218ENST00000548945 CETN2P41208 172 aa12.42□□□□□ -0.42
PTCH1-218ENST00000548945 NSG1P42857 185 aa12.42□□□□□ -0.42
PTCH1-218ENST00000548945 GABRA4P48169 554 aa12.42□□□□□ -0.42
PTCH1-218ENST00000548945 CDKN1CP49918 316 aaPredicted RBP12.42□□□□□ -0.42
PTCH1-218ENST00000548945 SOX8P57073 446 aa12.42□□□□□ -0.42
PTCH1-218ENST00000548945 DCDP81605 110 aaKnown RBP12.42□□□□□ -0.42
PTCH1-218ENST00000548945 PLOD1Q02809 727 aaPredicted RBP12.42□□□□□ -0.42
PTCH1-218ENST00000548945 CACNG1Q06432 222 aa12.42□□□□□ -0.42
PTCH1-218ENST00000548945 PRKG2Q13237 762 aa12.42□□□□□ -0.42
PTCH1-218ENST00000548945 MYBPC3Q14896 1274 aa12.42□□□□□ -0.42
PTCH1-218ENST00000548945 SPA17Q15506 151 aa12.42□□□□□ -0.42
PTCH1-218ENST00000548945 ZRANB3Q5FWF4 1079 aa12.42□□□□□ -0.42
PTCH1-218ENST00000548945 DCAF10Q5QP82 559 aa12.42□□□□□ -0.42
PTCH1-218ENST00000548945 KCTD11Q693B1 232 aa12.42□□□□□ -0.42
PTCH1-218ENST00000548945 TMTC1Q8IUR5 882 aa12.42□□□□□ -0.42
PTCH1-218ENST00000548945 TBC1D21Q8IYX1 336 aa12.42□□□□□ -0.42
PTCH1-218ENST00000548945 OR2Y1Q8NGV0 311 aa12.42□□□□□ -0.42
PTCH1-218ENST00000548945 CCDC110Q8TBZ0 833 aa12.42□□□□□ -0.42
PTCH1-218ENST00000548945 NACC2Q96BF6 587 aa12.42□□□□□ -0.42
PTCH1-218ENST00000548945 DNAJC1Q96KC8 554 aaKnown RBP12.42□□□□□ -0.42
PTCH1-218ENST00000548945 GBP5Q96PP8 586 aa12.42□□□□□ -0.42
PTCH1-218ENST00000548945 OR2A14Q96R47 310 aa12.42□□□□□ -0.42
PTCH1-218ENST00000548945 AP1M1Q9BXS5 423 aa12.42□□□□□ -0.42
PTCH1-218ENST00000548945 ICKQ9UPZ9 632 aa12.42□□□□□ -0.42
PTCH1-218ENST00000548945 B3GNT3Q9Y2A9 372 aa12.42□□□□□ -0.42
PTCH1-218ENST00000548945 PCDHA13Q9Y5I0 950 aa12.42□□□□□ -0.42
PTCH1-218ENST00000548945 PEX12O00623 359 aa12.41□□□□□ -0.42
PTCH1-218ENST00000548945 CCL22O00626 93 aa12.41□□□□□ -0.42
PTCH1-218ENST00000548945 ZSCAN9O15535 394 aaPredicted RBP12.41□□□□□ -0.42
PTCH1-218ENST00000548945 KDM1AO60341 852 aa12.41□□□□□ -0.42
PTCH1-218ENST00000548945 FTH1P02794 183 aa12.41□□□□□ -0.42
PTCH1-218ENST00000548945 UGT2B7P16662 529 aa12.41□□□□□ -0.42
PTCH1-218ENST00000548945 ACADLP28330 430 aa12.41□□□□□ -0.42
PTCH1-218ENST00000548945 OTX2P32243 289 aa12.41□□□□□ -0.42
PTCH1-218ENST00000548945 FOLR3P41439 243 aa12.41□□□□□ -0.42
PTCH1-218ENST00000548945 MRPL49Q13405 166 aaKnown RBP12.41□□□□□ -0.42
PTCH1-218ENST00000548945 ITIH4Q14624 930 aa12.41□□□□□ -0.42
PTCH1-218ENST00000548945 DBN1Q16643 649 aa12.41□□□□□ -0.42
PTCH1-218ENST00000548945 PARP6Q2NL67 630 aa12.41□□□□□ -0.42
PTCH1-218ENST00000548945 EIF2S3LQ2VIR3 472 aaKnown RBP12.41□□□□□ -0.42
PTCH1-218ENST00000548945 PLEKHN1Q494U1 663 aaPredicted RBP12.41□□□□□ -0.42
PTCH1-218ENST00000548945 LYPLAL1Q5VWZ2 237 aa12.41□□□□□ -0.42
PTCH1-218ENST00000548945 HIST2H2BCQ6DN03 193 aa12.41□□□□□ -0.42
PTCH1-218ENST00000548945 TLDC1Q6P9B6 456 aa12.41□□□□□ -0.42
PTCH1-218ENST00000548945 PACS1Q6VY07 963 aa12.41□□□□□ -0.42
PTCH1-218ENST00000548945 UNC5AQ6ZN44 842 aa12.41□□□□□ -0.42
PTCH1-218ENST00000548945 TAS2R42Q7RTR8 314 aa12.41□□□□□ -0.42
PTCH1-218ENST00000548945 PIANPQ8IYJ0 282 aa12.41□□□□□ -0.42
PTCH1-218ENST00000548945 GALNT16Q8N428 558 aa12.41□□□□□ -0.42
PTCH1-218ENST00000548945 CLDN19Q8N6F1 224 aa12.41□□□□□ -0.42
PTCH1-218ENST00000548945 TC2NQ8N9U0 490 aa12.41□□□□□ -0.42
PTCH1-218ENST00000548945 OR5AR1Q8NGP9 310 aa12.41□□□□□ -0.42
PTCH1-218ENST00000548945 OR5K2Q8NHB8 316 aa12.41□□□□□ -0.42
PTCH1-218ENST00000548945 STYXQ8WUJ0 223 aa12.41□□□□□ -0.42
PTCH1-218ENST00000548945 TM9SF4Q92544 642 aa12.41□□□□□ -0.42
PTCH1-218ENST00000548945 SNRNP40Q96DI7 357 aaKnown RBP12.41□□□□□ -0.42
PTCH1-218ENST00000548945 CDKN2AIPNLQ96HQ2 116 aa12.41□□□□□ -0.42
PTCH1-218ENST00000548945 NRTNQ99748 197 aa12.41□□□□□ -0.42
PTCH1-218ENST00000548945 KLHL25Q9H0H3 589 aa12.41□□□□□ -0.42
PTCH1-218ENST00000548945 XKR8Q9H6D3 395 aa12.41□□□□□ -0.42
PTCH1-218ENST00000548945 LRRC40Q9H9A6 602 aa12.41□□□□□ -0.42
PTCH1-218ENST00000548945 FAM60AQ9NP50 221 aa12.41□□□□□ -0.42
PTCH1-218ENST00000548945 CASS4Q9NQ75 786 aa12.41□□□□□ -0.42
PTCH1-218ENST00000548945 LUZP4Q9P127 313 aa12.41□□□□□ -0.42
PTCH1-218ENST00000548945 GPN3Q9UHW5 284 aaPredicted RBP12.41□□□□□ -0.42
PTCH1-218ENST00000548945 ASF1AQ9Y294 204 aa12.41□□□□□ -0.42
PTCH1-218ENST00000548945 A0A0J9YY10 115 aa12.4□□□□□ -0.42
PTCH1-218ENST00000548945 CBX6O95503 412 aa12.4□□□□□ -0.42
PTCH1-218ENST00000548945 LDLRP01130 860 aa12.4□□□□□ -0.42
PTCH1-218ENST00000548945 CHRM5P08912 532 aaPredicted RBP12.4□□□□□ -0.42
PTCH1-218ENST00000548945 RNF224P0DH78 156 aa12.4□□□□□ -0.42
PTCH1-218ENST00000548945 CBSLP0DN79 551 aa12.4□□□□□ -0.42
PTCH1-218ENST00000548945 CBSP35520 551 aa12.4□□□□□ -0.42
PTCH1-218ENST00000548945 CYLC1P35663 651 aaPredicted RBP12.4□□□□□ -0.42
PTCH1-218ENST00000548945 RWDD2BP57060 319 aa12.4□□□□□ -0.42
PTCH1-218ENST00000548945 SPARCL1Q14515 664 aa12.4□□□□□ -0.42
PTCH1-218ENST00000548945 KIR2DS3Q14952 304 aa12.4□□□□□ -0.42
PTCH1-218ENST00000548945 ZIC1Q15915 447 aa12.4□□□□□ -0.42
PTCH1-218ENST00000548945 KYNUQ16719 465 aa12.4□□□□□ -0.42
PTCH1-218ENST00000548945 SLC5A12Q1EHB4 618 aa12.4□□□□□ -0.42
PTCH1-218ENST00000548945 MLIPQ5VWP3 458 aa12.4□□□□□ -0.42
PTCH1-218ENST00000548945 MRPL14Q6P1L8 145 aaKnown RBP12.4□□□□□ -0.42
PTCH1-218ENST00000548945 ARHGEF18Q6ZSZ5 1173 aa12.4□□□□□ -0.42
PTCH1-218ENST00000548945 MAMDC2Q7Z304 686 aaPredicted RBP12.4□□□□□ -0.42
PTCH1-218ENST00000548945 FLVCR1-AS1Q8TAF5 88 aa12.4□□□□□ -0.42
PTCH1-218ENST00000548945 PRR7Q8TB68 274 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms