RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 ACAT2Q9BWD1 397 aa13.38□□□□□ -0.27
PRPF40B-209ENST00000548825 ACTL8Q9H568 366 aa13.38□□□□□ -0.27
PRPF40B-209ENST00000548825 RUBCNLQ9H714 662 aa13.38□□□□□ -0.27
PRPF40B-209ENST00000548825 ATP13A3Q9H7F0 1226 aa13.38□□□□□ -0.27
PRPF40B-209ENST00000548825 ARMC1Q9NVT9 282 aa13.38□□□□□ -0.27
PRPF40B-209ENST00000548825 ATXN10Q9UBB4 475 aa13.38□□□□□ -0.27
PRPF40B-209ENST00000548825 SARDHQ9UL12 918 aa13.38□□□□□ -0.27
PRPF40B-209ENST00000548825 TNPO3Q9Y5L0 923 aaKnown RBP13.38□□□□□ -0.27
PRPF40B-209ENST00000548825 STX16O14662 325 aa13.37□□□□□ -0.27
PRPF40B-209ENST00000548825 TBC1D4O60343 1298 aa13.37□□□□□ -0.27
PRPF40B-209ENST00000548825 MATN4O95460 622 aa13.37□□□□□ -0.27
PRPF40B-209ENST00000548825 PDYNP01213 254 aa13.37□□□□□ -0.27
PRPF40B-209ENST00000548825 THRBP10828 461 aa13.37□□□□□ -0.27
PRPF40B-209ENST00000548825 COL6A1P12109 1028 aa13.37□□□□□ -0.27
PRPF40B-209ENST00000548825 SERPINA4P29622 427 aa13.37□□□□□ -0.27
PRPF40B-209ENST00000548825 FMO3P31513 532 aa13.37□□□□□ -0.27
PRPF40B-209ENST00000548825 CYBRD1Q53TN4 286 aa13.37□□□□□ -0.27
PRPF40B-209ENST00000548825 ADNP2Q6IQ32 1131 aa13.37□□□□□ -0.27
PRPF40B-209ENST00000548825 SZRD1Q7Z422 152 aa13.37□□□□□ -0.27
PRPF40B-209ENST00000548825 STK40Q8N2I9 435 aa13.37□□□□□ -0.27
PRPF40B-209ENST00000548825 SNX19Q92543 992 aa13.37□□□□□ -0.27
PRPF40B-209ENST00000548825 SLC2A11Q9BYW1 496 aa13.37□□□□□ -0.27
PRPF40B-209ENST00000548825 TBC1D30Q9Y2I9 924 aa13.37□□□□□ -0.27
PRPF40B-209ENST00000548825 SZT2Q5T011 3432 aa13.37□□□□□ -0.27
PRPF40B-209ENST00000548825 DOCK4Q8N1I0 1966 aa13.37□□□□□ -0.27
PRPF40B-209ENST00000548825 ELOVL7A1L3X0 281 aa13.37□□□□□ -0.27
PRPF40B-209ENST00000548825 TMEM189-UBE2V1I3L0A0 370 aa13.37□□□□□ -0.27
PRPF40B-209ENST00000548825 CXCR6O00574 342 aa13.37□□□□□ -0.27
PRPF40B-209ENST00000548825 FCGR1AP12314 374 aa13.37□□□□□ -0.27
PRPF40B-209ENST00000548825 FSHRP23945 695 aa13.37□□□□□ -0.27
PRPF40B-209ENST00000548825 RECQLP46063 649 aaPredicted RBP13.37□□□□□ -0.27
PRPF40B-209ENST00000548825 ATP4BP51164 291 aa13.37□□□□□ -0.27
PRPF40B-209ENST00000548825 SUOXP51687 545 aa13.37□□□□□ -0.27
PRPF40B-209ENST00000548825 HPCAP84074 193 aa13.37□□□□□ -0.27
PRPF40B-209ENST00000548825 TRAF3Q13114 568 aa13.37□□□□□ -0.27
PRPF40B-209ENST00000548825 NUMA1Q14980 2115 aa13.37□□□□□ -0.27
PRPF40B-209ENST00000548825 R3HCC1LQ7Z5L2 792 aaKnown RBP13.37□□□□□ -0.27
PRPF40B-209ENST00000548825 ZC3H7AQ8IWR0 971 aaKnown RBP13.37□□□□□ -0.27
PRPF40B-209ENST00000548825 ZNF555Q8NEP9 628 aa13.37□□□□□ -0.27
PRPF40B-209ENST00000548825 OR7A2PQ8NGA2 310 aa13.37□□□□□ -0.27
PRPF40B-209ENST00000548825 OR52J3Q8NH60 311 aa13.37□□□□□ -0.27
PRPF40B-209ENST00000548825 ZUFSPQ96AP4 578 aa13.37□□□□□ -0.27
PRPF40B-209ENST00000548825 CAPNS2Q96L46 248 aa13.37□□□□□ -0.27
PRPF40B-209ENST00000548825 PANX1Q96RD7 426 aa13.37□□□□□ -0.27
PRPF40B-209ENST00000548825 YME1L1Q96TA2 773 aa13.37□□□□□ -0.27
PRPF40B-209ENST00000548825 MRPL9Q9BYD2 267 aaKnown RBP13.37□□□□□ -0.27
PRPF40B-209ENST00000548825 GPRC5BQ9NZH0 403 aa13.37□□□□□ -0.27
PRPF40B-209ENST00000548825 ABCD2Q9UBJ2 740 aa13.37□□□□□ -0.27
PRPF40B-209ENST00000548825 CCL26Q9Y258 94 aa13.37□□□□□ -0.27
PRPF40B-209ENST00000548825 FAM92AA1XBS5 289 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 RFXANKO14593 260 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 SH3BP5O60239 455 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 IGSF6O95976 241 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 LRG1P02750 347 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 OPN1SWP03999 348 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 BCKDHAP12694 445 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 PIGAP37287 484 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 CDKN2CP42773 168 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 CTBSQ01459 385 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 TLE2Q04725 743 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 NKG7Q16617 165 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 UAP1L1Q3KQV9 507 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 DPY19L3Q6ZPD9 716 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 VTCN1Q7Z7D3 282 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 DDX53Q86TM3 631 aaKnown RBP13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 PIH1D2Q8WWB5 315 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 ING5Q8WYH8 240 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 PPP3R2Q96LZ3 170 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 KIF17Q9P2E2 1029 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 PCDHB14Q9Y5E9 798 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 GNG14A0A1W2PPG7 69 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 RASAL1O95294 804 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 F11P03951 625 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 CCR3P51677 355 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 IRF8Q02556 426 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 STARD3Q14849 445 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 TTLL9Q3SXZ7 439 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 SULT1C3Q6IMI6 304 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 DLEU7Q6UYE1 221 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 Q6ZVL8 140 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 SNX20Q7Z614 316 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 TNIP2Q8NFZ5 429 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 NETO1Q8TDF5 533 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 PLD4Q96BZ4 506 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 APIPQ96GX9 242 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 RBM38Q9H0Z9 239 aaKnown RBP13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 CREBZFQ9NS37 354 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 ORC6Q9Y5N6 252 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 CNTRLQ7Z7A1 2325 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 K7EPI3 171 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 ACOX3O15254 700 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 AP1G1O43747 822 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 TRBC1P01850 177 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 KRT6AP02538 564 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 KRT6BP04259 564 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 ENO2P09104 434 aaPredicted RBP13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 SPAM1P38567 509 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 KRT6CP48668 564 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 DEFB103AP81534 67 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 EMX2Q04743 252 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms