RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 SLC34A2O95436 690 aa15.43■□□□□ 0.06
TRAFD1-203ENST00000547063 SBK3P0C264 359 aa15.43■□□□□ 0.06
TRAFD1-203ENST00000547063 MDH1P40925 334 aaKnown RBP15.43■□□□□ 0.06
TRAFD1-203ENST00000547063 KCNC1P48547 511 aa15.43■□□□□ 0.06
TRAFD1-203ENST00000547063 DNAJB13P59910 316 aa15.43■□□□□ 0.06
TRAFD1-203ENST00000547063 BNC1Q01954 994 aa15.43■□□□□ 0.06
TRAFD1-203ENST00000547063 GRIK2Q13002 908 aa15.43■□□□□ 0.06
TRAFD1-203ENST00000547063 C1orf61Q13536 156 aa15.43■□□□□ 0.06
TRAFD1-203ENST00000547063 RPE65Q16518 533 aa15.43■□□□□ 0.06
TRAFD1-203ENST00000547063 LPAL2Q16609 132 aa15.43■□□□□ 0.06
TRAFD1-203ENST00000547063 LIPMQ5VYY2 423 aa15.43■□□□□ 0.06
TRAFD1-203ENST00000547063 IYDQ6PHW0 289 aa15.43■□□□□ 0.06
TRAFD1-203ENST00000547063 FAM46DQ8NEK8 389 aa15.43■□□□□ 0.06
TRAFD1-203ENST00000547063 FERD3LQ96RJ6 166 aa15.43■□□□□ 0.06
TRAFD1-203ENST00000547063 RAB11FIP5Q9BXF6 653 aa15.43■□□□□ 0.06
TRAFD1-203ENST00000547063 STN1Q9H668 368 aaKnown RBP15.43■□□□□ 0.06
TRAFD1-203ENST00000547063 MLXIPLQ9NP71 852 aa15.43■□□□□ 0.06
TRAFD1-203ENST00000547063 IMP3Q9NV31 184 aaKnown RBP15.43■□□□□ 0.06
TRAFD1-203ENST00000547063 UTP6Q9NYH9 597 aaKnown RBP15.43■□□□□ 0.06
TRAFD1-203ENST00000547063 WDR37Q9Y2I8 494 aa15.43■□□□□ 0.06
TRAFD1-203ENST00000547063 TDRD6O60522 2096 aaKnown RBP15.43■□□□□ 0.06
TRAFD1-203ENST00000547063 KNL1Q8NG31 2342 aa15.43■□□□□ 0.06
TRAFD1-203ENST00000547063 A0A1B0GTQ1 180 aa15.42■□□□□ 0.06
TRAFD1-203ENST00000547063 A8MT66 165 aa15.42■□□□□ 0.06
TRAFD1-203ENST00000547063 MYO1CO00159 1063 aa15.42■□□□□ 0.06
TRAFD1-203ENST00000547063 POLR3GO15318 223 aaPredicted RBP15.42■□□□□ 0.06
TRAFD1-203ENST00000547063 RETP07949 1114 aa15.42■□□□□ 0.06
TRAFD1-203ENST00000547063 MTHFD2P13995 350 aa15.42■□□□□ 0.06
TRAFD1-203ENST00000547063 XRCC1P18887 633 aaPredicted RBP15.42■□□□□ 0.06
TRAFD1-203ENST00000547063 GRK2P25098 689 aa15.42■□□□□ 0.06
TRAFD1-203ENST00000547063 ALDH3A1P30838 453 aa15.42■□□□□ 0.06
TRAFD1-203ENST00000547063 CCT8P50990 548 aa15.42■□□□□ 0.06
TRAFD1-203ENST00000547063 ARHGAP19Q14CB8 494 aa15.42■□□□□ 0.06
TRAFD1-203ENST00000547063 CLCA4Q14CN2 919 aa15.42■□□□□ 0.06
TRAFD1-203ENST00000547063 PDK4Q16654 411 aa15.42■□□□□ 0.06
TRAFD1-203ENST00000547063 PFKFB4Q16877 469 aa15.42■□□□□ 0.06
TRAFD1-203ENST00000547063 HLA-BQ31612 363 aa15.42■□□□□ 0.06
TRAFD1-203ENST00000547063 ATG16L1Q676U5 607 aa15.42■□□□□ 0.06
TRAFD1-203ENST00000547063 SLC9B2Q86UD5 537 aa15.42■□□□□ 0.06
TRAFD1-203ENST00000547063 C10orf107Q8IVU9 208 aa15.42■□□□□ 0.06
TRAFD1-203ENST00000547063 SPNS2Q8IVW8 549 aa15.42■□□□□ 0.06
TRAFD1-203ENST00000547063 TRIM48Q8IWZ4 208 aa15.42■□□□□ 0.06
TRAFD1-203ENST00000547063 RBM12BQ8IXT5 1001 aaKnown RBP15.42■□□□□ 0.06
TRAFD1-203ENST00000547063 OR9A1PQ8NGU1 263 aa15.42■□□□□ 0.06
TRAFD1-203ENST00000547063 DLG3Q92796 817 aa15.42■□□□□ 0.06
TRAFD1-203ENST00000547063 FBXL8Q96CD0 374 aa15.42■□□□□ 0.06
TRAFD1-203ENST00000547063 ARRDC1-AS1Q9H2J1 176 aa15.42■□□□□ 0.06
TRAFD1-203ENST00000547063 POT1Q9NUX5 634 aa15.42■□□□□ 0.06
TRAFD1-203ENST00000547063 NCKIPSDQ9NZQ3 722 aa15.42■□□□□ 0.06
TRAFD1-203ENST00000547063 SPATA7Q9P0W8 599 aa15.42■□□□□ 0.06
TRAFD1-203ENST00000547063 SIRPGQ9P1W8 387 aa15.42■□□□□ 0.06
TRAFD1-203ENST00000547063 LNPEPQ9UIQ6 1025 aa15.42■□□□□ 0.06
TRAFD1-203ENST00000547063 GMEB2Q9UKD1 530 aa15.42■□□□□ 0.06
TRAFD1-203ENST00000547063 NCF1BA6NI72 391 aaPredicted RBP15.41■□□□□ 0.06
TRAFD1-203ENST00000547063 NCF1CA8MVU1 366 aaPredicted RBP15.41■□□□□ 0.06
TRAFD1-203ENST00000547063 YY2O15391 372 aa15.41■□□□□ 0.06
TRAFD1-203ENST00000547063 SNUPNO95149 360 aaKnown RBP15.41■□□□□ 0.06
TRAFD1-203ENST00000547063 GUCA1CO95843 209 aa15.41■□□□□ 0.06
TRAFD1-203ENST00000547063 ALPPL2P10696 532 aa15.41■□□□□ 0.06
TRAFD1-203ENST00000547063 NCF1P14598 390 aaPredicted RBP15.41■□□□□ 0.06
TRAFD1-203ENST00000547063 IMPDH1P20839 514 aa15.41■□□□□ 0.06
TRAFD1-203ENST00000547063 EPHA8P29322 1005 aaPredicted RBP15.41■□□□□ 0.06
TRAFD1-203ENST00000547063 SERPINB5P36952 375 aa15.41■□□□□ 0.06
TRAFD1-203ENST00000547063 BDKRB1P46663 353 aa15.41■□□□□ 0.06
TRAFD1-203ENST00000547063 HERVK_113P63132 956 aa15.41■□□□□ 0.06
TRAFD1-203ENST00000547063 SETDB1Q15047 1291 aa15.41■□□□□ 0.06
TRAFD1-203ENST00000547063 TCEA2Q15560 299 aa15.41■□□□□ 0.06
TRAFD1-203ENST00000547063 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.41■□□□□ 0.06
TRAFD1-203ENST00000547063 CFAP157Q5JU67 520 aa15.41■□□□□ 0.06
TRAFD1-203ENST00000547063 SFRP1Q8N474 314 aa15.41■□□□□ 0.06
TRAFD1-203ENST00000547063 PTGR2Q8N8N7 351 aaPredicted RBP15.41■□□□□ 0.06
TRAFD1-203ENST00000547063 OR5AR1Q8NGP9 310 aa15.41■□□□□ 0.06
TRAFD1-203ENST00000547063 LRRC8CQ8TDW0 803 aa15.41■□□□□ 0.06
TRAFD1-203ENST00000547063 ZDHHC1Q8WTX9 485 aa15.41■□□□□ 0.06
TRAFD1-203ENST00000547063 UBTD2Q8WUN7 234 aa15.41■□□□□ 0.06
TRAFD1-203ENST00000547063 CKAP2Q8WWK9 683 aa15.41■□□□□ 0.06
TRAFD1-203ENST00000547063 RHBDF1Q96CC6 855 aa15.41■□□□□ 0.06
TRAFD1-203ENST00000547063 PHF21BQ96EK2 531 aa15.41■□□□□ 0.06
TRAFD1-203ENST00000547063 L3HYPDHQ96EM0 354 aa15.41■□□□□ 0.06
TRAFD1-203ENST00000547063 MAGEB18Q96M61 343 aa15.41■□□□□ 0.06
TRAFD1-203ENST00000547063 DUSP23Q9BVJ7 150 aa15.41■□□□□ 0.06
TRAFD1-203ENST00000547063 ERVK-6Q9BXR3 956 aa15.41■□□□□ 0.06
TRAFD1-203ENST00000547063 GAREM1Q9H706 876 aa15.41■□□□□ 0.06
TRAFD1-203ENST00000547063 WWOXQ9NZC7 414 aa15.41■□□□□ 0.06
TRAFD1-203ENST00000547063 PTBP2Q9UKA9 531 aaKnown RBP15.41■□□□□ 0.06
TRAFD1-203ENST00000547063 CFAP20Q9Y6A4 193 aaKnown RBP15.41■□□□□ 0.06
TRAFD1-203ENST00000547063 ANKRD12Q6UB98 2062 aa15.4■□□□□ 0.06
TRAFD1-203ENST00000547063 WDR91A4D1P6 747 aa15.4■□□□□ 0.06
TRAFD1-203ENST00000547063 OR52A4PA6NMU1 304 aa15.4■□□□□ 0.06
TRAFD1-203ENST00000547063 KLF11O14901 512 aa15.4■□□□□ 0.06
TRAFD1-203ENST00000547063 VIPP01282 170 aa15.4■□□□□ 0.06
TRAFD1-203ENST00000547063 SERPINE1P05121 402 aa15.4■□□□□ 0.06
TRAFD1-203ENST00000547063 CELA2BP08218 269 aaPredicted RBP15.4■□□□□ 0.06
TRAFD1-203ENST00000547063 GGT5P36269 586 aa15.4■□□□□ 0.06
TRAFD1-203ENST00000547063 PIK3CGP48736 1102 aa15.4■□□□□ 0.06
TRAFD1-203ENST00000547063 ATXN3P54252 364 aaPredicted RBP15.4■□□□□ 0.06
TRAFD1-203ENST00000547063 TCF15Q12870 199 aa15.4■□□□□ 0.06
TRAFD1-203ENST00000547063 PCBP2Q15366 365 aaKnown RBP eCLIP15.4■□□□□ 0.06
TRAFD1-203ENST00000547063 PLA2G2CQ5R387 149 aa15.4■□□□□ 0.06
TRAFD1-203ENST00000547063 PRAMEF14Q5SWL7 426 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms