RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 PRSS42Q7Z5A4 293 aa16.32■□□□□ 0.2
CCDC38-203ENST00000546803 ARHGAP22Q7Z5H3 698 aa16.32■□□□□ 0.2
CCDC38-203ENST00000546803 CPNE9Q8IYJ1 553 aa16.32■□□□□ 0.2
CCDC38-203ENST00000546803 CARFQ8N187 725 aa16.32■□□□□ 0.2
CCDC38-203ENST00000546803 FBXO39Q8N4B4 442 aa16.32■□□□□ 0.2
CCDC38-203ENST00000546803 RAB42Q8N4Z0 105 aa16.32■□□□□ 0.2
CCDC38-203ENST00000546803 AGBL5Q8NDL9 886 aa16.32■□□□□ 0.2
CCDC38-203ENST00000546803 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.32■□□□□ 0.2
CCDC38-203ENST00000546803 TGM7Q96PF1 710 aa16.32■□□□□ 0.2
CCDC38-203ENST00000546803 RBBP8Q99708 897 aa16.32■□□□□ 0.2
CCDC38-203ENST00000546803 RAB11FIP5Q9BXF6 653 aa16.32■□□□□ 0.2
CCDC38-203ENST00000546803 SATB2Q9UPW6 733 aa16.32■□□□□ 0.2
CCDC38-203ENST00000546803 ICKQ9UPZ9 632 aa16.32■□□□□ 0.2
CCDC38-203ENST00000546803 NFS1Q9Y697 457 aa16.32■□□□□ 0.2
CCDC38-203ENST00000546803 SPTBN2O15020 2390 aa16.31■□□□□ 0.2
CCDC38-203ENST00000546803 POLR2CP19387 275 aaPredicted RBP16.31■□□□□ 0.2
CCDC38-203ENST00000546803 TNFRSF8P28908 595 aa16.31■□□□□ 0.2
CCDC38-203ENST00000546803 SPRP35270 261 aaPredicted RBP16.31■□□□□ 0.2
CCDC38-203ENST00000546803 RAB28P51157 221 aa16.31■□□□□ 0.2
CCDC38-203ENST00000546803 IL2P60568 153 aa16.31■□□□□ 0.2
CCDC38-203ENST00000546803 GABREP78334 506 aa16.31■□□□□ 0.2
CCDC38-203ENST00000546803 POU4F1Q01851 419 aa16.31■□□□□ 0.2
CCDC38-203ENST00000546803 C16orf72Q14CZ0 275 aa16.31■□□□□ 0.2
CCDC38-203ENST00000546803 C3orf38Q5JPI3 329 aa16.31■□□□□ 0.2
CCDC38-203ENST00000546803 SNAP47Q5SQN1 464 aa16.31■□□□□ 0.2
CCDC38-203ENST00000546803 IGF2-ASQ6U949 168 aa16.31■□□□□ 0.2
CCDC38-203ENST00000546803 TRMT10CQ7L0Y3 403 aaKnown RBP16.31■□□□□ 0.2
CCDC38-203ENST00000546803 ADGRF3Q8IZF5 1079 aa16.31■□□□□ 0.2
CCDC38-203ENST00000546803 FBXO15Q8NCQ5 510 aaPredicted RBP16.31■□□□□ 0.2
CCDC38-203ENST00000546803 ASB11Q8WXH4 323 aa16.31■□□□□ 0.2
CCDC38-203ENST00000546803 UBXN4Q92575 508 aa16.31■□□□□ 0.2
CCDC38-203ENST00000546803 TSPAN17Q96FV3 270 aa16.31■□□□□ 0.2
CCDC38-203ENST00000546803 OLFM1Q99784 485 aa16.31■□□□□ 0.2
CCDC38-203ENST00000546803 TMEM121BQ9BXQ6 578 aaPredicted RBP16.31■□□□□ 0.2
CCDC38-203ENST00000546803 XKR8Q9H6D3 395 aa16.31■□□□□ 0.2
CCDC38-203ENST00000546803 ACSS3Q9H6R3 686 aa16.31■□□□□ 0.2
CCDC38-203ENST00000546803 SEMA5BQ9P283 1151 aa16.31■□□□□ 0.2
CCDC38-203ENST00000546803 KLHL3Q9UH77 587 aa16.31■□□□□ 0.2
CCDC38-203ENST00000546803 TSR3Q9UJK0 312 aaKnown RBP16.31■□□□□ 0.2
CCDC38-203ENST00000546803 SLC39A10Q9ULF5 831 aa16.31■□□□□ 0.2
CCDC38-203ENST00000546803 RUVBL2Q9Y230 463 aaKnown RBP16.31■□□□□ 0.2
CCDC38-203ENST00000546803 LOXL2Q9Y4K0 774 aa16.31■□□□□ 0.2
CCDC38-203ENST00000546803 AK5Q9Y6K8 562 aa16.31■□□□□ 0.2
CCDC38-203ENST00000546803 TLCD2A6NGC4 264 aa16.3■□□□□ 0.2
CCDC38-203ENST00000546803 C2orf74A8MZ97 194 aa16.3■□□□□ 0.2
CCDC38-203ENST00000546803 GFYI3L273 518 aa16.3■□□□□ 0.2
CCDC38-203ENST00000546803 BTN3A3O00478 584 aa16.3■□□□□ 0.2
CCDC38-203ENST00000546803 ZBTB14O43829 449 aa16.3■□□□□ 0.2
CCDC38-203ENST00000546803 RASSF9O75901 435 aa16.3■□□□□ 0.2
CCDC38-203ENST00000546803 DXOO77932 396 aaKnown RBP16.3■□□□□ 0.2
CCDC38-203ENST00000546803 ACSL3O95573 720 aa16.3■□□□□ 0.2
CCDC38-203ENST00000546803 MPOP05164 745 aa16.3■□□□□ 0.2
CCDC38-203ENST00000546803 JMJD7P0C870 316 aa16.3■□□□□ 0.2
CCDC38-203ENST00000546803 TPBGLP0DKB5 382 aa16.3■□□□□ 0.2
CCDC38-203ENST00000546803 MAP4P27816 1152 aaKnown RBP16.3■□□□□ 0.2
CCDC38-203ENST00000546803 PKLRP30613 574 aa16.3■□□□□ 0.2
CCDC38-203ENST00000546803 SLC12A2P55011 1212 aa16.3■□□□□ 0.2
CCDC38-203ENST00000546803 TAS2R39P59534 338 aa16.3■□□□□ 0.2
CCDC38-203ENST00000546803 GRB7Q14451 532 aa16.3■□□□□ 0.2
CCDC38-203ENST00000546803 CACHD1Q5VU97 1274 aa16.3■□□□□ 0.2
CCDC38-203ENST00000546803 RASGRP3Q8IV61 690 aa16.3■□□□□ 0.2
CCDC38-203ENST00000546803 MYO1HQ8N1T3 1032 aa16.3■□□□□ 0.2
CCDC38-203ENST00000546803 RCBTB1Q8NDN9 531 aa16.3■□□□□ 0.2
CCDC38-203ENST00000546803 EEF1AKMT1Q8WVE0 214 aa16.3■□□□□ 0.2
CCDC38-203ENST00000546803 PDLIM5Q96HC4 596 aaKnown RBP16.3■□□□□ 0.2
CCDC38-203ENST00000546803 GPR22Q99680 433 aa16.3■□□□□ 0.2
CCDC38-203ENST00000546803 MENTQ9BUN1 341 aa16.3■□□□□ 0.2
CCDC38-203ENST00000546803 TWSG1Q9GZX9 223 aa16.3■□□□□ 0.2
CCDC38-203ENST00000546803 POPDC3Q9HBV1 291 aa16.3■□□□□ 0.2
CCDC38-203ENST00000546803 SYTL2Q9HCH5 934 aa16.3■□□□□ 0.2
CCDC38-203ENST00000546803 SPATA7Q9P0W8 599 aa16.3■□□□□ 0.2
CCDC38-203ENST00000546803 DKK4Q9UBT3 224 aa16.3■□□□□ 0.2
CCDC38-203ENST00000546803 LNPEPQ9UIQ6 1025 aa16.3■□□□□ 0.2
CCDC38-203ENST00000546803 RP1P56715 2156 aa16.3■□□□□ 0.2
CCDC38-203ENST00000546803 ZFC3H1O60293 1989 aaKnown RBP16.29■□□□□ 0.2
CCDC38-203ENST00000546803 A0A1W2PNU3 283 aaPredicted RBP16.29■□□□□ 0.2
CCDC38-203ENST00000546803 PIPSLA2A3N6 862 aa16.29■□□□□ 0.2
CCDC38-203ENST00000546803 GSAPA4D1B5 854 aa16.29■□□□□ 0.2
CCDC38-203ENST00000546803 A8MU76 341 aa16.29■□□□□ 0.2
CCDC38-203ENST00000546803 ARHGEF33A8MVX0 844 aa16.29■□□□□ 0.2
CCDC38-203ENST00000546803 BTN3A1O00481 513 aa16.29■□□□□ 0.2
CCDC38-203ENST00000546803 RASGRF2O14827 1237 aa16.29■□□□□ 0.2
CCDC38-203ENST00000546803 SLC16A5O15375 505 aa16.29■□□□□ 0.2
CCDC38-203ENST00000546803 C8GP07360 202 aa16.29■□□□□ 0.2
CCDC38-203ENST00000546803 ABHD2P08910 425 aa16.29■□□□□ 0.2
CCDC38-203ENST00000546803 CHRM5P08912 532 aaPredicted RBP16.29■□□□□ 0.2
CCDC38-203ENST00000546803 SAT1P21673 171 aa16.29■□□□□ 0.2
CCDC38-203ENST00000546803 RBMS1P29558 406 aaKnown RBP16.29■□□□□ 0.2
CCDC38-203ENST00000546803 BDKRB1P46663 353 aa16.29■□□□□ 0.2
CCDC38-203ENST00000546803 PMS2P54278 862 aa16.29■□□□□ 0.2
CCDC38-203ENST00000546803 SP140Q13342 867 aa16.29■□□□□ 0.2
CCDC38-203ENST00000546803 USP10Q14694 798 aaKnown RBP16.29■□□□□ 0.2
CCDC38-203ENST00000546803 UNQ6494/PRO21346Q6UXR6 183 aa16.29■□□□□ 0.2
CCDC38-203ENST00000546803 FAM92BQ6ZTR7 304 aa16.29■□□□□ 0.2
CCDC38-203ENST00000546803 PIWIL4Q7Z3Z4 852 aaKnown RBP16.29■□□□□ 0.2
CCDC38-203ENST00000546803 KMT5CQ86Y97 462 aa16.29■□□□□ 0.2
CCDC38-203ENST00000546803 NKAPQ8N5F7 415 aaKnown RBP16.29■□□□□ 0.2
CCDC38-203ENST00000546803 OR9A1PQ8NGU1 263 aa16.29■□□□□ 0.2
CCDC38-203ENST00000546803 OR2L8Q8NGY9 312 aa16.29■□□□□ 0.2
CCDC38-203ENST00000546803 KLHL6Q8WZ60 621 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms