RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 PMF1Q6P1K2 205 aa6.56□□□□□ -1.36
CCDC60-205ENST00000546345 LIPIQ6XZB0 460 aa6.56□□□□□ -1.36
CCDC60-205ENST00000546345 STXBP4Q6ZWJ1 553 aa6.56□□□□□ -1.36
CCDC60-205ENST00000546345 PIM3Q86V86 326 aa6.56□□□□□ -1.36
CCDC60-205ENST00000546345 GKN2Q86XP6 184 aa6.56□□□□□ -1.36
CCDC60-205ENST00000546345 SIX6OS1Q8N1H7 587 aa6.56□□□□□ -1.36
CCDC60-205ENST00000546345 RASGEF1CQ8N431 466 aa6.56□□□□□ -1.36
CCDC60-205ENST00000546345 ENDOVQ8N8Q3 282 aaKnown RBP6.56□□□□□ -1.36
CCDC60-205ENST00000546345 UBA3Q8TBC4 463 aa6.56□□□□□ -1.36
CCDC60-205ENST00000546345 FAM81AQ8TBF8 368 aa6.56□□□□□ -1.36
CCDC60-205ENST00000546345 ZNF398Q8TD17 642 aa6.56□□□□□ -1.36
CCDC60-205ENST00000546345 OR1E3Q8WZA6 343 aa6.56□□□□□ -1.36
CCDC60-205ENST00000546345 SEMA4DQ92854 862 aa6.56□□□□□ -1.36
CCDC60-205ENST00000546345 EEF2KMTQ96G04 330 aa6.56□□□□□ -1.36
CCDC60-205ENST00000546345 SERPINB11Q96P15 392 aa6.56□□□□□ -1.36
CCDC60-205ENST00000546345 HAPLN3Q96S86 360 aa6.56□□□□□ -1.36
CCDC60-205ENST00000546345 CTRCQ99895 268 aa6.56□□□□□ -1.36
CCDC60-205ENST00000546345 C7orf25Q9BPX7 421 aa6.56□□□□□ -1.36
CCDC60-205ENST00000546345 DDX50Q9BQ39 737 aaKnown RBP6.56□□□□□ -1.36
CCDC60-205ENST00000546345 ZSWIM1Q9BR11 485 aa6.56□□□□□ -1.36
CCDC60-205ENST00000546345 SLC29A3Q9BZD2 475 aa6.56□□□□□ -1.36
CCDC60-205ENST00000546345 TRIM8Q9BZR9 551 aa6.56□□□□□ -1.36
CCDC60-205ENST00000546345 FGF22Q9HCT0 170 aa6.56□□□□□ -1.36
CCDC60-205ENST00000546345 SLC39A2Q9NP94 309 aa6.56□□□□□ -1.36
CCDC60-205ENST00000546345 DYRK4Q9NR20 520 aa6.56□□□□□ -1.36
CCDC60-205ENST00000546345 CISHQ9NSE2 258 aa6.56□□□□□ -1.36
CCDC60-205ENST00000546345 SLC39A1Q9NY26 324 aa6.56□□□□□ -1.36
CCDC60-205ENST00000546345 NTMQ9P121 344 aa6.56□□□□□ -1.36
CCDC60-205ENST00000546345 MTRF1LQ9UGC7 380 aaKnown RBP6.56□□□□□ -1.36
CCDC60-205ENST00000546345 VPS28Q9UK41 221 aa6.56□□□□□ -1.36
CCDC60-205ENST00000546345 TMCO1Q9UM00 188 aa6.56□□□□□ -1.36
CCDC60-205ENST00000546345 POLHQ9Y253 713 aa6.56□□□□□ -1.36
CCDC60-205ENST00000546345 ARL2BPQ9Y2Y0 163 aa6.56□□□□□ -1.36
CCDC60-205ENST00000546345 CNTRLQ7Z7A1 2325 aa6.56□□□□□ -1.36
CCDC60-205ENST00000546345 ANKRD12Q6UB98 2062 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.55□□□□□ -1.36
CCDC60-205ENST00000546345 MACROD2A1Z1Q3 448 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 PRAMEF25A6NGN4 478 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 F5H5T6 163 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 M0QYT0 321 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 TRAFD1O14545 582 aaPredicted RBP6.55□□□□□ -1.36
CCDC60-205ENST00000546345 TSPAN6O43657 245 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 SNX3O60493 162 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 SRGAP2O75044 1071 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 SMIM24O75264 130 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 CYP7B1O75881 506 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 CPA3P15088 417 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 ZNF28P17035 718 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 CALB2P22676 271 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 CASP1P29466 404 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 GKP32189 559 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 STAT6P42226 847 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 MSH2P43246 934 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 MTIF2P46199 727 aaKnown RBP6.55□□□□□ -1.36
CCDC60-205ENST00000546345 LEPRP48357 1165 aaKnown RBP6.55□□□□□ -1.36
CCDC60-205ENST00000546345 CARSP49589 748 aaKnown RBP6.55□□□□□ -1.36
CCDC60-205ENST00000546345 MECP2P51608 486 aaKnown RBP6.55□□□□□ -1.36
CCDC60-205ENST00000546345 PGDP52209 483 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 SEC24CP53992 1094 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 KRTAP10-9P60411 292 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 SRP54P61011 504 aaKnown RBP6.55□□□□□ -1.36
CCDC60-205ENST00000546345 SNRPFP62306 86 aaKnown RBP6.55□□□□□ -1.36
CCDC60-205ENST00000546345 IRF9Q00978 393 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 MC1RQ01726 317 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 DBPQ10586 325 aaPredicted RBP6.55□□□□□ -1.36
CCDC60-205ENST00000546345 SEMA5AQ13591 1074 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 TRA2AQ13595 282 aaKnown RBP eCLIP6.55□□□□□ -1.36
CCDC60-205ENST00000546345 ERV3-1Q14264 604 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 NFATC4Q14934 902 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 RPS6KA1Q15418 735 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 EDRF1Q3B7T1 1238 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 TNFAIP8L3Q5GJ75 292 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 ANKRD20A2Q5SQ80 823 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 DCAF12Q5T6F0 453 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 ANKRD20A1Q5TYW2 823 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 ANKRD20A3Q5VUR7 823 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 NKAIN2Q5VXU1 208 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 FBXL22Q6P050 247 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 LCNL1Q6ZST4 164 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 ASRGL1Q7L266 308 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 RD3Q7Z3Z2 195 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 ARHGAP22Q7Z5H3 698 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.55□□□□□ -1.36
CCDC60-205ENST00000546345 GUF1Q8N442 669 aaKnown RBP6.55□□□□□ -1.36
CCDC60-205ENST00000546345 RIBC1Q8N443 379 aaPredicted RBP6.55□□□□□ -1.36
CCDC60-205ENST00000546345 DCAF4L2Q8NA75 395 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 OR4D9Q8NGE8 314 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 PATE1Q8WXA2 126 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 KLHL29Q96CT2 875 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 PPP1R16AQ96I34 528 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 FEM1CQ96JP0 617 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 BTN2A3PQ96KV6 586 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 NR1H4Q96RI1 486 aaPredicted RBP6.55□□□□□ -1.36
CCDC60-205ENST00000546345 TSG101Q99816 390 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 ASPSCR1Q9BZE9 553 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 INTS2Q9H0H0 1204 aaKnown RBP6.55□□□□□ -1.36
CCDC60-205ENST00000546345 DCLRE1BQ9H816 532 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 MRPL40Q9NQ50 206 aaKnown RBP6.55□□□□□ -1.36
CCDC60-205ENST00000546345 DLL4Q9NR61 685 aa6.55□□□□□ -1.36
CCDC60-205ENST00000546345 INTS9Q9NV88 658 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms