RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 BASP1P80723 227 aaKnown RBP9.06□□□□□ -0.96
YBX3-218ENST00000546298 CDK16Q00536 496 aa9.06□□□□□ -0.96
YBX3-218ENST00000546298 HSPA14Q0VDF9 509 aa9.06□□□□□ -0.96
YBX3-218ENST00000546298 KIR2DS3Q14952 304 aa9.06□□□□□ -0.96
YBX3-218ENST00000546298 TTC23LQ6PF05 361 aa9.06□□□□□ -0.96
YBX3-218ENST00000546298 ASB18Q6ZVZ8 466 aa9.06□□□□□ -0.96
YBX3-218ENST00000546298 LRRC6Q86X45 466 aa9.06□□□□□ -0.96
YBX3-218ENST00000546298 DSELQ8IZU8 1212 aa9.06□□□□□ -0.96
YBX3-218ENST00000546298 C19orf47Q8N9M1 422 aaKnown RBP9.06□□□□□ -0.96
YBX3-218ENST00000546298 TEX19Q8NA77 164 aa9.06□□□□□ -0.96
YBX3-218ENST00000546298 OR1L3Q8NH93 324 aa9.06□□□□□ -0.96
YBX3-218ENST00000546298 SLC22A18Q96BI1 424 aa9.06□□□□□ -0.96
YBX3-218ENST00000546298 AP1M1Q9BXS5 423 aa9.06□□□□□ -0.96
YBX3-218ENST00000546298 IL22Q9GZX6 179 aa9.06□□□□□ -0.96
YBX3-218ENST00000546298 AKIRIN1Q9H9L7 192 aaPredicted RBP9.06□□□□□ -0.96
YBX3-218ENST00000546298 LZTFL1Q9NQ48 299 aa9.06□□□□□ -0.96
YBX3-218ENST00000546298 ACSS2Q9NR19 701 aa9.06□□□□□ -0.96
YBX3-218ENST00000546298 CATSPERZQ9NTU4 200 aa9.06□□□□□ -0.96
YBX3-218ENST00000546298 SLC2A6Q9UGQ3 507 aa9.06□□□□□ -0.96
YBX3-218ENST00000546298 TLK1Q9UKI8 766 aa9.06□□□□□ -0.96
YBX3-218ENST00000546298 G3BP2Q9UN86 482 aaKnown RBP9.06□□□□□ -0.96
YBX3-218ENST00000546298 SNX7Q9UNH6 387 aa9.06□□□□□ -0.96
YBX3-218ENST00000546298 ICKQ9UPZ9 632 aa9.06□□□□□ -0.96
YBX3-218ENST00000546298 TP53TG5Q9Y2B4 290 aa9.06□□□□□ -0.96
YBX3-218ENST00000546298 MRFAP1Q9Y605 127 aa9.06□□□□□ -0.96
YBX3-218ENST00000546298 A0A0J9YY10 115 aa9.05□□□□□ -0.96
YBX3-218ENST00000546298 ISM1B1AKI9 464 aa9.05□□□□□ -0.96
YBX3-218ENST00000546298 CD3EAPO15446 510 aaKnown RBP9.05□□□□□ -0.96
YBX3-218ENST00000546298 CEP104O60308 925 aa9.05□□□□□ -0.96
YBX3-218ENST00000546298 NDUFS3O75489 264 aa9.05□□□□□ -0.96
YBX3-218ENST00000546298 OR2B3O76000 313 aa9.05□□□□□ -0.96
YBX3-218ENST00000546298 FURINP09958 794 aa9.05□□□□□ -0.96
YBX3-218ENST00000546298 PVRP15151 417 aa9.05□□□□□ -0.96
YBX3-218ENST00000546298 UGT2B7P16662 529 aa9.05□□□□□ -0.96
YBX3-218ENST00000546298 RORAP35398 523 aa9.05□□□□□ -0.96
YBX3-218ENST00000546298 RAB28P51157 221 aa9.05□□□□□ -0.96
YBX3-218ENST00000546298 SESN2P58004 480 aaPredicted RBP9.05□□□□□ -0.96
YBX3-218ENST00000546298 SARNPP82979 210 aaKnown RBP9.05□□□□□ -0.96
YBX3-218ENST00000546298 ABRQ12979 859 aa9.05□□□□□ -0.96
YBX3-218ENST00000546298 SLC5A12Q1EHB4 618 aa9.05□□□□□ -0.96
YBX3-218ENST00000546298 PRAMEF17Q5VTA0 474 aa9.05□□□□□ -0.96
YBX3-218ENST00000546298 ARMC3Q5W041 872 aa9.05□□□□□ -0.96
YBX3-218ENST00000546298 PTRHD1Q6GMV3 140 aaKnown RBP9.05□□□□□ -0.96
YBX3-218ENST00000546298 TLDC1Q6P9B6 456 aa9.05□□□□□ -0.96
YBX3-218ENST00000546298 UNC5DQ6UXZ4 953 aa9.05□□□□□ -0.96
YBX3-218ENST00000546298 CDHR3Q6ZTQ4 885 aa9.05□□□□□ -0.96
YBX3-218ENST00000546298 ZNF534Q76KX8 674 aa9.05□□□□□ -0.96
YBX3-218ENST00000546298 SDCCAG8Q86SQ7 713 aaPredicted RBP9.05□□□□□ -0.96
YBX3-218ENST00000546298 PRUNE1Q86TP1 453 aa9.05□□□□□ -0.96
YBX3-218ENST00000546298 TMEM135Q86UB9 458 aa9.05□□□□□ -0.96
YBX3-218ENST00000546298 DCUN1D3Q8IWE4 304 aa9.05□□□□□ -0.96
YBX3-218ENST00000546298 SYTL1Q8IYJ3 562 aa9.05□□□□□ -0.96
YBX3-218ENST00000546298 SLC22A15Q8IZD6 547 aa9.05□□□□□ -0.96
YBX3-218ENST00000546298 SLC38A9Q8NBW4 561 aa9.05□□□□□ -0.96
YBX3-218ENST00000546298 DENND1AQ8TEH3 1009 aa9.05□□□□□ -0.96
YBX3-218ENST00000546298 ZNF778Q96MU6 729 aa9.05□□□□□ -0.96
YBX3-218ENST00000546298 IP6K3Q96PC2 410 aa9.05□□□□□ -0.96
YBX3-218ENST00000546298 OR2A14Q96R47 310 aa9.05□□□□□ -0.96
YBX3-218ENST00000546298 RUFY1Q96T51 708 aa9.05□□□□□ -0.96
YBX3-218ENST00000546298 DHRS4Q9BTZ2 278 aa9.05□□□□□ -0.96
YBX3-218ENST00000546298 KLHL25Q9H0H3 589 aa9.05□□□□□ -0.96
YBX3-218ENST00000546298 EPN3Q9H201 632 aa9.05□□□□□ -0.96
YBX3-218ENST00000546298 CHRAC1Q9NRG0 131 aa9.05□□□□□ -0.96
YBX3-218ENST00000546298 PCMTD2Q9NV79 361 aa9.05□□□□□ -0.96
YBX3-218ENST00000546298 INTS7Q9NVH2 962 aaKnown RBP9.05□□□□□ -0.96
YBX3-218ENST00000546298 TCFL5Q9UL49 500 aa9.05□□□□□ -0.96
YBX3-218ENST00000546298 SLC39A10Q9ULF5 831 aa9.05□□□□□ -0.96
YBX3-218ENST00000546298 SRPK3Q9UPE1 567 aa9.05□□□□□ -0.96
YBX3-218ENST00000546298 PLCL2Q9UPR0 1127 aa9.05□□□□□ -0.96
YBX3-218ENST00000546298 PADI2Q9Y2J8 665 aa9.05□□□□□ -0.96
YBX3-218ENST00000546298 PCDHGA9Q9Y5G4 932 aaKnown RBP9.05□□□□□ -0.96
YBX3-218ENST00000546298 CELSR3Q9NYQ7 3312 aa9.05□□□□□ -0.96
YBX3-218ENST00000546298 ZNF749O43361 778 aa9.04□□□□□ -0.96
YBX3-218ENST00000546298 GPC4O75487 556 aa9.04□□□□□ -0.96
YBX3-218ENST00000546298 SLCO2B1O94956 709 aa9.04□□□□□ -0.96
YBX3-218ENST00000546298 FKBP9O95302 570 aa9.04□□□□□ -0.96
YBX3-218ENST00000546298 S1PR4O95977 384 aa9.04□□□□□ -0.96
YBX3-218ENST00000546298 IGHEP01854 428 aa9.04□□□□□ -0.96
YBX3-218ENST00000546298 ZSCAN5DPP0CG00 497 aa9.04□□□□□ -0.96
YBX3-218ENST00000546298 RPS3P23396 243 aaKnown RBP eCLIP9.04□□□□□ -0.96
YBX3-218ENST00000546298 PKLRP30613 574 aa9.04□□□□□ -0.96
YBX3-218ENST00000546298 CCR7P32248 378 aa9.04□□□□□ -0.96
YBX3-218ENST00000546298 CCL11P51671 97 aa9.04□□□□□ -0.96
YBX3-218ENST00000546298 RRADP55042 308 aa9.04□□□□□ -0.96
YBX3-218ENST00000546298 CSE1LP55060 971 aaKnown RBP9.04□□□□□ -0.96
YBX3-218ENST00000546298 RPS18P62269 152 aaKnown RBP9.04□□□□□ -0.96
YBX3-218ENST00000546298 SIX1Q15475 284 aaPredicted RBP9.04□□□□□ -0.96
YBX3-218ENST00000546298 KYNUQ16719 465 aa9.04□□□□□ -0.96
YBX3-218ENST00000546298 ZNF789Q5FWF6 425 aa9.04□□□□□ -0.96
YBX3-218ENST00000546298 MRNIPQ6NTE8 343 aa9.04□□□□□ -0.96
YBX3-218ENST00000546298 NAPRTQ6XQN6 538 aa9.04□□□□□ -0.96
YBX3-218ENST00000546298 MICALCLQ6ZW33 695 aa9.04□□□□□ -0.96
YBX3-218ENST00000546298 TRIM73Q86UV7 250 aa9.04□□□□□ -0.96
YBX3-218ENST00000546298 RAB43Q86YS6 212 aa9.04□□□□□ -0.96
YBX3-218ENST00000546298 LRRC8AQ8IWT6 810 aa9.04□□□□□ -0.96
YBX3-218ENST00000546298 RAB42Q8N4Z0 105 aa9.04□□□□□ -0.96
YBX3-218ENST00000546298 OTUD6BQ8N6M0 293 aa9.04□□□□□ -0.96
YBX3-218ENST00000546298 ENDOVQ8N8Q3 282 aaKnown RBP9.04□□□□□ -0.96
YBX3-218ENST00000546298 TMEM102Q8N9M5 508 aaPredicted RBP9.04□□□□□ -0.96
YBX3-218ENST00000546298 GLIS1Q8NBF1 620 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms