RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 HGSO14964 777 aaPredicted RBP16.33■□□□□ 0.2
LTBR-215ENST00000546296 SLU7O95391 586 aaKnown RBP16.33■□□□□ 0.2
LTBR-215ENST00000546296 MATN4O95460 622 aa16.33■□□□□ 0.2
LTBR-215ENST00000546296 C1orf105O95561 183 aa16.33■□□□□ 0.2
LTBR-215ENST00000546296 ACSL3O95573 720 aa16.33■□□□□ 0.2
LTBR-215ENST00000546296 C9P02748 559 aa16.33■□□□□ 0.2
LTBR-215ENST00000546296 JMJD7P0C870 316 aa16.33■□□□□ 0.2
LTBR-215ENST00000546296 GP5P40197 560 aa16.33■□□□□ 0.2
LTBR-215ENST00000546296 BDKRB1P46663 353 aa16.33■□□□□ 0.2
LTBR-215ENST00000546296 SLC12A2P55011 1212 aa16.33■□□□□ 0.2
LTBR-215ENST00000546296 TUBB4BP68371 445 aa16.33■□□□□ 0.2
LTBR-215ENST00000546296 TIAL1Q01085 375 aaKnown RBP eCLIP16.33■□□□□ 0.2
LTBR-215ENST00000546296 CYP4F3Q08477 520 aa16.33■□□□□ 0.2
LTBR-215ENST00000546296 C16orf72Q14CZ0 275 aa16.33■□□□□ 0.2
LTBR-215ENST00000546296 CACHD1Q5VU97 1274 aa16.33■□□□□ 0.2
LTBR-215ENST00000546296 PAQR3Q6TCH7 311 aa16.33■□□□□ 0.2
LTBR-215ENST00000546296 NEK10Q6ZWH5 1172 aa16.33■□□□□ 0.2
LTBR-215ENST00000546296 SPNS2Q8IVW8 549 aa16.33■□□□□ 0.2
LTBR-215ENST00000546296 RAB42Q8N4Z0 105 aa16.33■□□□□ 0.2
LTBR-215ENST00000546296 GATA6Q92908 595 aa16.33■□□□□ 0.2
LTBR-215ENST00000546296 RAD51AP1Q96B01 352 aa16.33■□□□□ 0.2
LTBR-215ENST00000546296 VPS39Q96JC1 886 aa16.33■□□□□ 0.2
LTBR-215ENST00000546296 NRTNQ99748 197 aa16.33■□□□□ 0.2
LTBR-215ENST00000546296 CDC42EP4Q9H3Q1 356 aaKnown RBP16.33■□□□□ 0.2
LTBR-215ENST00000546296 PISDQ9UG56 409 aa16.33■□□□□ 0.2
LTBR-215ENST00000546296 ICKQ9UPZ9 632 aa16.33■□□□□ 0.2
LTBR-215ENST00000546296 MN1Q10571 1320 aaPredicted RBP16.33■□□□□ 0.2
LTBR-215ENST00000546296 C1QTNF9BB2RNN3 333 aa16.32■□□□□ 0.2
LTBR-215ENST00000546296 EIF3FO00303 357 aaPredicted RBP16.32■□□□□ 0.2
LTBR-215ENST00000546296 MATN2O00339 956 aa16.32■□□□□ 0.2
LTBR-215ENST00000546296 BTN3A3O00478 584 aa16.32■□□□□ 0.2
LTBR-215ENST00000546296 KIF1CO43896 1103 aaKnown RBP16.32■□□□□ 0.2
LTBR-215ENST00000546296 CATP04040 527 aaKnown RBP16.32■□□□□ 0.2
LTBR-215ENST00000546296 C1QTNF9P0C862 333 aa16.32■□□□□ 0.2
LTBR-215ENST00000546296 MPC1LP0DKB6 136 aa16.32■□□□□ 0.2
LTBR-215ENST00000546296 HGFP14210 728 aa16.32■□□□□ 0.2
LTBR-215ENST00000546296 CD9P21926 228 aa16.32■□□□□ 0.2
LTBR-215ENST00000546296 FDXRP22570 491 aa16.32■□□□□ 0.2
LTBR-215ENST00000546296 MAP4P27816 1152 aaKnown RBP16.32■□□□□ 0.2
LTBR-215ENST00000546296 ARL4DP49703 201 aa16.32■□□□□ 0.2
LTBR-215ENST00000546296 SEPHS1P49903 392 aa16.32■□□□□ 0.2
LTBR-215ENST00000546296 IL2P60568 153 aa16.32■□□□□ 0.2
LTBR-215ENST00000546296 PPP1CAP62136 330 aa16.32■□□□□ 0.2
LTBR-215ENST00000546296 NAB1Q13506 487 aa16.32■□□□□ 0.2
LTBR-215ENST00000546296 RTP5Q14D33 572 aa16.32■□□□□ 0.2
LTBR-215ENST00000546296 GRTP1Q5TC63 336 aa16.32■□□□□ 0.2
LTBR-215ENST00000546296 LRRC8EQ6NSJ5 796 aa16.32■□□□□ 0.2
LTBR-215ENST00000546296 UNQ6494/PRO21346Q6UXR6 183 aa16.32■□□□□ 0.2
LTBR-215ENST00000546296 ARHGAP22Q7Z5H3 698 aa16.32■□□□□ 0.2
LTBR-215ENST00000546296 FAM129CQ86XR2 697 aa16.32■□□□□ 0.2
LTBR-215ENST00000546296 LSMEM2Q8N112 164 aa16.32■□□□□ 0.2
LTBR-215ENST00000546296 EEF1AKMT1Q8WVE0 214 aa16.32■□□□□ 0.2
LTBR-215ENST00000546296 MRRFQ96E11 262 aaKnown RBP16.32■□□□□ 0.2
LTBR-215ENST00000546296 CYTH2Q99418 400 aa16.32■□□□□ 0.2
LTBR-215ENST00000546296 OLFM1Q99784 485 aa16.32■□□□□ 0.2
LTBR-215ENST00000546296 CCDC86Q9H6F5 360 aaKnown RBP16.32■□□□□ 0.2
LTBR-215ENST00000546296 OR6C2Q9NZP2 312 aa16.32■□□□□ 0.2
LTBR-215ENST00000546296 MTO1Q9Y2Z2 717 aaKnown RBP16.32■□□□□ 0.2
LTBR-215ENST00000546296 A0A1W2PNU3 283 aaPredicted RBP16.31■□□□□ 0.2
LTBR-215ENST00000546296 PIPSLA2A3N6 862 aa16.31■□□□□ 0.2
LTBR-215ENST00000546296 EFCAB7A8K855 629 aa16.31■□□□□ 0.2
LTBR-215ENST00000546296 C2orf74A8MZ97 194 aa16.31■□□□□ 0.2
LTBR-215ENST00000546296 BTN3A1O00481 513 aa16.31■□□□□ 0.2
LTBR-215ENST00000546296 TOX3O15405 576 aaPredicted RBP16.31■□□□□ 0.2
LTBR-215ENST00000546296 BRINP1O60477 761 aa16.31■□□□□ 0.2
LTBR-215ENST00000546296 TNFSF15O95150 251 aa16.31■□□□□ 0.2
LTBR-215ENST00000546296 TPBGLP0DKB5 382 aa16.31■□□□□ 0.2
LTBR-215ENST00000546296 SPRP35270 261 aaPredicted RBP16.31■□□□□ 0.2
LTBR-215ENST00000546296 RAB28P51157 221 aa16.31■□□□□ 0.2
LTBR-215ENST00000546296 MAPK10P53779 464 aa16.31■□□□□ 0.2
LTBR-215ENST00000546296 EFTUD2Q15029 972 aaKnown RBP eCLIP16.31■□□□□ 0.2
LTBR-215ENST00000546296 CYHR1Q6ZMK1 362 aa16.31■□□□□ 0.2
LTBR-215ENST00000546296 PIWIL4Q7Z3Z4 852 aaKnown RBP16.31■□□□□ 0.2
LTBR-215ENST00000546296 ADGRF3Q8IZF5 1079 aa16.31■□□□□ 0.2
LTBR-215ENST00000546296 MYO1HQ8N1T3 1032 aa16.31■□□□□ 0.2
LTBR-215ENST00000546296 ASB11Q8WXH4 323 aa16.31■□□□□ 0.2
LTBR-215ENST00000546296 LINGO1Q96FE5 620 aa16.31■□□□□ 0.2
LTBR-215ENST00000546296 CD180Q99467 661 aa16.31■□□□□ 0.2
LTBR-215ENST00000546296 RBBP8Q99708 897 aa16.31■□□□□ 0.2
LTBR-215ENST00000546296 ACTR10Q9NZ32 417 aa16.31■□□□□ 0.2
LTBR-215ENST00000546296 LNPEPQ9UIQ6 1025 aa16.31■□□□□ 0.2
LTBR-215ENST00000546296 PCDHGA8Q9Y5G5 932 aa16.31■□□□□ 0.2
LTBR-215ENST00000546296 UNC13CQ8NB66 2214 aa16.31■□□□□ 0.2
LTBR-215ENST00000546296 PMS2P1A4D2B8 440 aa16.3■□□□□ 0.2
LTBR-215ENST00000546296 RASGRF2O14827 1237 aa16.3■□□□□ 0.2
LTBR-215ENST00000546296 ZBTB14O43829 449 aa16.3■□□□□ 0.2
LTBR-215ENST00000546296 PSIP1O75475 530 aaKnown RBP16.3■□□□□ 0.2
LTBR-215ENST00000546296 FAM155BO75949 473 aa16.3■□□□□ 0.2
LTBR-215ENST00000546296 SYF2O95926 243 aaKnown RBP16.3■□□□□ 0.2
LTBR-215ENST00000546296 CHRM5P08912 532 aaPredicted RBP16.3■□□□□ 0.2
LTBR-215ENST00000546296 ANKRD34CP0C6C1 535 aa16.3■□□□□ 0.2
LTBR-215ENST00000546296 CCL4P13236 92 aa16.3■□□□□ 0.2
LTBR-215ENST00000546296 CDH3P22223 829 aa16.3■□□□□ 0.2
LTBR-215ENST00000546296 PRDX3P30048 256 aaKnown RBP16.3■□□□□ 0.2
LTBR-215ENST00000546296 PKLRP30613 574 aa16.3■□□□□ 0.2
LTBR-215ENST00000546296 KPNA2P52292 529 aaKnown RBP16.3■□□□□ 0.2
LTBR-215ENST00000546296 PGGT1BP53609 377 aa16.3■□□□□ 0.2
LTBR-215ENST00000546296 TAS2R39P59534 338 aa16.3■□□□□ 0.2
LTBR-215ENST00000546296 POU4F1Q01851 419 aa16.3■□□□□ 0.2
LTBR-215ENST00000546296 USP10Q14694 798 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms