RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 APOL2Q9BQE5 337 aa16.09■□□□□ 0.17
CPSF7-225ENST00000545934 HGH1Q9BTY7 390 aa16.09■□□□□ 0.17
CPSF7-225ENST00000545934 AP1M1Q9BXS5 423 aa16.09■□□□□ 0.17
CPSF7-225ENST00000545934 ZDHHC3Q9NYG2 299 aa16.09■□□□□ 0.17
CPSF7-225ENST00000545934 GPN3Q9UHW5 284 aaPredicted RBP16.09■□□□□ 0.17
CPSF7-225ENST00000545934 CPAMD8Q8IZJ3 1885 aa16.09■□□□□ 0.17
CPSF7-225ENST00000545934 SPOPO43791 374 aa16.08■□□□□ 0.16
CPSF7-225ENST00000545934 CRTAMO95727 393 aa16.08■□□□□ 0.16
CPSF7-225ENST00000545934 GSTM1P09488 218 aa16.08■□□□□ 0.16
CPSF7-225ENST00000545934 ITGALP20701 1170 aa16.08■□□□□ 0.16
CPSF7-225ENST00000545934 CDKN1CP49918 316 aaPredicted RBP16.08■□□□□ 0.16
CPSF7-225ENST00000545934 HADHBP55084 474 aaKnown RBP16.08■□□□□ 0.16
CPSF7-225ENST00000545934 FOXL2P58012 376 aa16.08■□□□□ 0.16
CPSF7-225ENST00000545934 GSTM4Q03013 218 aa16.08■□□□□ 0.16
CPSF7-225ENST00000545934 ELOAQ14241 798 aaKnown RBP16.08■□□□□ 0.16
CPSF7-225ENST00000545934 DEFB110Q30KQ9 67 aa16.08■□□□□ 0.16
CPSF7-225ENST00000545934 GPR33Q49SQ1 333 aa16.08■□□□□ 0.16
CPSF7-225ENST00000545934 UNC5AQ6ZN44 842 aa16.08■□□□□ 0.16
CPSF7-225ENST00000545934 BBS12Q6ZW61 710 aa16.08■□□□□ 0.16
CPSF7-225ENST00000545934 TRIM73Q86UV7 250 aa16.08■□□□□ 0.16
CPSF7-225ENST00000545934 TFGQ92734 400 aaPredicted RBP16.08■□□□□ 0.16
CPSF7-225ENST00000545934 NACC2Q96BF6 587 aa16.08■□□□□ 0.16
CPSF7-225ENST00000545934 C10orf88Q9H8K7 445 aa16.08■□□□□ 0.16
CPSF7-225ENST00000545934 NHEJ1Q9H9Q4 299 aaPredicted RBP16.08■□□□□ 0.16
CPSF7-225ENST00000545934 ARNT2Q9HBZ2 717 aa16.08■□□□□ 0.16
CPSF7-225ENST00000545934 ATP13A2Q9NQ11 1180 aa16.08■□□□□ 0.16
CPSF7-225ENST00000545934 SLC22A11Q9NSA0 550 aa16.08■□□□□ 0.16
CPSF7-225ENST00000545934 IFT80Q9P2H3 777 aaPredicted RBP16.08■□□□□ 0.16
CPSF7-225ENST00000545934 DHCR7Q9UBM7 475 aaKnown RBP16.08■□□□□ 0.16
CPSF7-225ENST00000545934 INTUQ9ULD6 942 aa16.08■□□□□ 0.16
CPSF7-225ENST00000545934 CSAG2Q9Y5P2 127 aa16.08■□□□□ 0.16
CPSF7-225ENST00000545934 APCP25054 2843 aa16.08■□□□□ 0.16
CPSF7-225ENST00000545934 H7C0S8 307 aa16.07■□□□□ 0.16
CPSF7-225ENST00000545934 AGPSO00116 658 aa16.07■□□□□ 0.16
CPSF7-225ENST00000545934 CCL22O00626 93 aa16.07■□□□□ 0.16
CPSF7-225ENST00000545934 ZSCAN9O15535 394 aaPredicted RBP16.07■□□□□ 0.16
CPSF7-225ENST00000545934 ACRV1P26436 265 aa16.07■□□□□ 0.16
CPSF7-225ENST00000545934 SHMT2P34897 504 aa16.07■□□□□ 0.16
CPSF7-225ENST00000545934 GLRBP48167 497 aa16.07■□□□□ 0.16
CPSF7-225ENST00000545934 TMPRSS15P98073 1019 aa16.07■□□□□ 0.16
CPSF7-225ENST00000545934 PRKG2Q13237 762 aa16.07■□□□□ 0.16
CPSF7-225ENST00000545934 NKAIN1Q4KMZ8 207 aa16.07■□□□□ 0.16
CPSF7-225ENST00000545934 ITPRIPL1Q6GPH6 555 aa16.07■□□□□ 0.16
CPSF7-225ENST00000545934 MICALCLQ6ZW33 695 aa16.07■□□□□ 0.16
CPSF7-225ENST00000545934 KLHDC8BQ8IXV7 354 aa16.07■□□□□ 0.16
CPSF7-225ENST00000545934 RCOR2Q8IZ40 523 aa16.07■□□□□ 0.16
CPSF7-225ENST00000545934 DNAJC22Q8N4W6 341 aa16.07■□□□□ 0.16
CPSF7-225ENST00000545934 OR5AR1Q8NGP9 310 aa16.07■□□□□ 0.16
CPSF7-225ENST00000545934 PPP4R1Q8TF05 950 aa16.07■□□□□ 0.16
CPSF7-225ENST00000545934 WDR77Q9BQA1 342 aaPredicted RBP16.07■□□□□ 0.16
CPSF7-225ENST00000545934 VPS37BQ9H9H4 285 aa16.07■□□□□ 0.16
CPSF7-225ENST00000545934 AGPAT4Q9NRZ5 378 aa16.07■□□□□ 0.16
CPSF7-225ENST00000545934 ABHD10Q9NUJ1 306 aa16.07■□□□□ 0.16
CPSF7-225ENST00000545934 SPHK1Q9NYA1 384 aa16.07■□□□□ 0.16
CPSF7-225ENST00000545934 NDOR1Q9UHB4 597 aa16.07■□□□□ 0.16
CPSF7-225ENST00000545934 SRPK3Q9UPE1 567 aa16.07■□□□□ 0.16
CPSF7-225ENST00000545934 AAR2Q9Y312 384 aaKnown RBP16.07■□□□□ 0.16
CPSF7-225ENST00000545934 ALG6Q9Y672 507 aa16.07■□□□□ 0.16
CPSF7-225ENST00000545934 A0A0J9YY10 115 aa16.06■□□□□ 0.16
CPSF7-225ENST00000545934 SYCE3A1L190 88 aa16.06■□□□□ 0.16
CPSF7-225ENST00000545934 APOC4-APOC2K7ER74 178 aa16.06■□□□□ 0.16
CPSF7-225ENST00000545934 ZRANB2O95218 330 aaKnown RBP eCLIP16.06■□□□□ 0.16
CPSF7-225ENST00000545934 ONECUT2O95948 504 aa16.06■□□□□ 0.16
CPSF7-225ENST00000545934 APOC2P02655 101 aa16.06■□□□□ 0.16
CPSF7-225ENST00000545934 CHRM5P08912 532 aaPredicted RBP16.06■□□□□ 0.16
CPSF7-225ENST00000545934 PRSS56P0CW18 603 aa16.06■□□□□ 0.16
CPSF7-225ENST00000545934 ITGAXP20702 1163 aa16.06■□□□□ 0.16
CPSF7-225ENST00000545934 PSMB4P28070 264 aa16.06■□□□□ 0.16
CPSF7-225ENST00000545934 ACADLP28330 430 aa16.06■□□□□ 0.16
CPSF7-225ENST00000545934 MC4RP32245 332 aa16.06■□□□□ 0.16
CPSF7-225ENST00000545934 TSFMP43897 325 aaKnown RBP16.06■□□□□ 0.16
CPSF7-225ENST00000545934 MARCKSL1P49006 195 aa16.06■□□□□ 0.16
CPSF7-225ENST00000545934 AIMP2Q13155 320 aaKnown RBP16.06■□□□□ 0.16
CPSF7-225ENST00000545934 SLC9A5Q14940 896 aa16.06■□□□□ 0.16
CPSF7-225ENST00000545934 TLDC1Q6P9B6 456 aa16.06■□□□□ 0.16
CPSF7-225ENST00000545934 SERPINA9Q86WD7 417 aa16.06■□□□□ 0.16
CPSF7-225ENST00000545934 CLDN19Q8N6F1 224 aa16.06■□□□□ 0.16
CPSF7-225ENST00000545934 ZNF655Q8N720 491 aaPredicted RBP16.06■□□□□ 0.16
CPSF7-225ENST00000545934 GOLPH3Q9H4A6 298 aa16.06■□□□□ 0.16
CPSF7-225ENST00000545934 NOVA2Q9UNW9 492 aaKnown RBP16.06■□□□□ 0.16
CPSF7-225ENST00000545934 PDZD2O15018 2839 aa16.05■□□□□ 0.16
CPSF7-225ENST00000545934 GOLGA6L19H0YKK7 550 aa16.05■□□□□ 0.16
CPSF7-225ENST00000545934 PRF1P14222 555 aa16.05■□□□□ 0.16
CPSF7-225ENST00000545934 MMP11P24347 488 aa16.05■□□□□ 0.16
CPSF7-225ENST00000545934 PEBP1P30086 187 aaKnown RBP16.05■□□□□ 0.16
CPSF7-225ENST00000545934 ANP32AP39687 249 aaKnown RBP16.05■□□□□ 0.16
CPSF7-225ENST00000545934 TRIM14Q14142 442 aa16.05■□□□□ 0.16
CPSF7-225ENST00000545934 ZRSR2Q15696 482 aaKnown RBP16.05■□□□□ 0.16
CPSF7-225ENST00000545934 CYP2A13Q16696 494 aa16.05■□□□□ 0.16
CPSF7-225ENST00000545934 SLC5A12Q1EHB4 618 aa16.05■□□□□ 0.16
CPSF7-225ENST00000545934 ANKRD20A2Q5SQ80 823 aa16.05■□□□□ 0.16
CPSF7-225ENST00000545934 ANKRD20A1Q5TYW2 823 aa16.05■□□□□ 0.16
CPSF7-225ENST00000545934 ANKRD20A3Q5VUR7 823 aa16.05■□□□□ 0.16
CPSF7-225ENST00000545934 ZNF449Q6P9G9 518 aa16.05■□□□□ 0.16
CPSF7-225ENST00000545934 N4BP2L2Q92802 583 aaPredicted RBP16.05■□□□□ 0.16
CPSF7-225ENST00000545934 FKBP10Q96AY3 582 aa16.05■□□□□ 0.16
CPSF7-225ENST00000545934 DNAJC1Q96KC8 554 aaKnown RBP16.05■□□□□ 0.16
CPSF7-225ENST00000545934 CCDC42Q96M95 316 aa16.05■□□□□ 0.16
CPSF7-225ENST00000545934 SLC6A20Q9NP91 592 aa16.05■□□□□ 0.16
CPSF7-225ENST00000545934 ENAMQ9NRM1 1142 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms