RNA–Protein interactions for RNA: ENST00000545115.5

DDX11-228, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-228ENST00000545115 IP6K3Q96PC2 410 aa13.65□□□□□ -0.22
DDX11-228ENST00000545115 SMAD5Q99717 465 aaKnown RBP13.65□□□□□ -0.22
DDX11-228ENST00000545115 CHRNA10Q9GZZ6 450 aa13.65□□□□□ -0.22
DDX11-228ENST00000545115 LACRTQ9GZZ8 138 aa13.65□□□□□ -0.22
DDX11-228ENST00000545115 FAM60AQ9NP50 221 aa13.65□□□□□ -0.22
DDX11-228ENST00000545115 OR6C2Q9NZP2 312 aa13.65□□□□□ -0.22
DDX11-228ENST00000545115 POLG2Q9UHN1 485 aa13.65□□□□□ -0.22
DDX11-228ENST00000545115 PRSS21Q9Y6M0 314 aa13.65□□□□□ -0.22
DDX11-228ENST00000545115 A0A0J9YY10 115 aa13.64□□□□□ -0.23
DDX11-228ENST00000545115 MROH6A6NGR9 719 aa13.64□□□□□ -0.23
DDX11-228ENST00000545115 H3BMH7 237 aa13.64□□□□□ -0.23
DDX11-228ENST00000545115 PSMD3O43242 534 aa13.64□□□□□ -0.23
DDX11-228ENST00000545115 KLF7O75840 302 aaPredicted RBP13.64□□□□□ -0.23
DDX11-228ENST00000545115 CHRM5P08912 532 aaPredicted RBP13.64□□□□□ -0.23
DDX11-228ENST00000545115 PSMA3P25788 255 aa13.64□□□□□ -0.23
DDX11-228ENST00000545115 MSNP26038 577 aaKnown RBP13.64□□□□□ -0.23
DDX11-228ENST00000545115 ACADLP28330 430 aa13.64□□□□□ -0.23
DDX11-228ENST00000545115 OTX2P32243 289 aa13.64□□□□□ -0.23
DDX11-228ENST00000545115 GABRA4P48169 554 aa13.64□□□□□ -0.23
DDX11-228ENST00000545115 GDF10P55107 478 aa13.64□□□□□ -0.23
DDX11-228ENST00000545115 PLOD1Q02809 727 aaPredicted RBP13.64□□□□□ -0.23
DDX11-228ENST00000545115 SSPNQ14714 243 aa13.64□□□□□ -0.23
DDX11-228ENST00000545115 BRD3Q15059 726 aa13.64□□□□□ -0.23
DDX11-228ENST00000545115 ZIC1Q15915 447 aa13.64□□□□□ -0.23
DDX11-228ENST00000545115 DEFB110Q30KQ9 67 aa13.64□□□□□ -0.23
DDX11-228ENST00000545115 SYTL3Q4VX76 610 aa13.64□□□□□ -0.23
DDX11-228ENST00000545115 PRR30Q53SZ7 412 aaPredicted RBP13.64□□□□□ -0.23
DDX11-228ENST00000545115 MRGPREQ86SM8 312 aa13.64□□□□□ -0.23
DDX11-228ENST00000545115 LINC00523Q86TU6 105 aa13.64□□□□□ -0.23
DDX11-228ENST00000545115 UBL4BQ8N7F7 174 aa13.64□□□□□ -0.23
DDX11-228ENST00000545115 RBMXL3Q8N7X1 1067 aaKnown RBP13.64□□□□□ -0.23
DDX11-228ENST00000545115 Q8NA96 180 aa13.64□□□□□ -0.23
DDX11-228ENST00000545115 OR5K2Q8NHB8 316 aa13.64□□□□□ -0.23
DDX11-228ENST00000545115 PROKR1Q8TCW9 393 aa13.64□□□□□ -0.23
DDX11-228ENST00000545115 PNPLA2Q96AD5 504 aa13.64□□□□□ -0.23
DDX11-228ENST00000545115 OR2A14Q96R47 310 aa13.64□□□□□ -0.23
DDX11-228ENST00000545115 MFRPQ9BY79 579 aa13.64□□□□□ -0.23
DDX11-228ENST00000545115 SLC29A3Q9BZD2 475 aa13.64□□□□□ -0.23
DDX11-228ENST00000545115 PIH1D1Q9NWS0 290 aaKnown RBP13.64□□□□□ -0.23
DDX11-228ENST00000545115 LUZP4Q9P127 313 aa13.64□□□□□ -0.23
DDX11-228ENST00000545115 GPN3Q9UHW5 284 aaPredicted RBP13.64□□□□□ -0.23
DDX11-228ENST00000545115 AMFRQ9UKV5 643 aa13.64□□□□□ -0.23
DDX11-228ENST00000545115 REXO2Q9Y3B8 237 aaKnown RBP13.64□□□□□ -0.23
DDX11-228ENST00000545115 SPTAN1Q13813 2472 aaKnown RBP13.64□□□□□ -0.23
DDX11-228ENST00000545115 RP1L1Q8IWN7 2480 aaPredicted RBP13.63□□□□□ -0.23
DDX11-228ENST00000545115 SLC5A10A0PJK1 596 aa13.63□□□□□ -0.23
DDX11-228ENST00000545115 CCDC78A2IDD5 438 aa13.63□□□□□ -0.23
DDX11-228ENST00000545115 OR51F1A6NGY5 319 aa13.63□□□□□ -0.23
DDX11-228ENST00000545115 MIF4GDA9UHW6 222 aaKnown RBP13.63□□□□□ -0.23
DDX11-228ENST00000545115 ZSCAN9O15535 394 aaPredicted RBP13.63□□□□□ -0.23
DDX11-228ENST00000545115 KDM1AO60341 852 aa13.63□□□□□ -0.23
DDX11-228ENST00000545115 CD63P08962 238 aa13.63□□□□□ -0.23
DDX11-228ENST00000545115 OR56A5P0C7T3 313 aa13.63□□□□□ -0.23
DDX11-228ENST00000545115 CBSLP0DN79 551 aa13.63□□□□□ -0.23
DDX11-228ENST00000545115 FOXN2P32314 431 aa13.63□□□□□ -0.23
DDX11-228ENST00000545115 CBSP35520 551 aa13.63□□□□□ -0.23
DDX11-228ENST00000545115 FOLR3P41439 243 aa13.63□□□□□ -0.23
DDX11-228ENST00000545115 DCDP81605 110 aaKnown RBP13.63□□□□□ -0.23
DDX11-228ENST00000545115 KLF1Q13351 362 aaPredicted RBP13.63□□□□□ -0.23
DDX11-228ENST00000545115 RAPSNQ13702 412 aa13.63□□□□□ -0.23
DDX11-228ENST00000545115 C4orf17Q53FE4 359 aa13.63□□□□□ -0.23
DDX11-228ENST00000545115 VWA5B1Q5TIE3 1220 aa13.63□□□□□ -0.23
DDX11-228ENST00000545115 MLIPQ5VWP3 458 aa13.63□□□□□ -0.23
DDX11-228ENST00000545115 PEX26Q7Z412 305 aa13.63□□□□□ -0.23
DDX11-228ENST00000545115 SYCE1Q8N0S2 351 aa13.63□□□□□ -0.23
DDX11-228ENST00000545115 CLEC1AQ8NC01 280 aa13.63□□□□□ -0.23
DDX11-228ENST00000545115 ACRBPQ8NEB7 543 aa13.63□□□□□ -0.23
DDX11-228ENST00000545115 FLVCR1-AS1Q8TAF5 88 aa13.63□□□□□ -0.23
DDX11-228ENST00000545115 SSC4DQ8WTU2 575 aa13.63□□□□□ -0.23
DDX11-228ENST00000545115 FER1L6-AS2Q96M78 137 aa13.63□□□□□ -0.23
DDX11-228ENST00000545115 GBP5Q96PP8 586 aa13.63□□□□□ -0.23
DDX11-228ENST00000545115 TMEM121Q9BTD3 319 aa13.63□□□□□ -0.23
DDX11-228ENST00000545115 CUEDC1Q9NWM3 386 aaPredicted RBP13.63□□□□□ -0.23
DDX11-228ENST00000545115 SPHK1Q9NYA1 384 aa13.63□□□□□ -0.23
DDX11-228ENST00000545115 C5AR2Q9P296 337 aa13.63□□□□□ -0.23
DDX11-228ENST00000545115 PLEKHB1Q9UF11 243 aaPredicted RBP13.63□□□□□ -0.23
DDX11-228ENST00000545115 NDOR1Q9UHB4 597 aa13.63□□□□□ -0.23
DDX11-228ENST00000545115 SRPK3Q9UPE1 567 aa13.63□□□□□ -0.23
DDX11-228ENST00000545115 TDRKHQ9Y2W6 561 aaKnown RBP13.63□□□□□ -0.23
DDX11-228ENST00000545115 SEC16AO15027 2179 aa13.63□□□□□ -0.23
DDX11-228ENST00000545115 SPTBN1Q01082 2364 aaKnown RBP13.63□□□□□ -0.23
DDX11-228ENST00000545115 SHANK1Q9Y566 2161 aa13.62□□□□□ -0.23
DDX11-228ENST00000545115 PIKFYVEQ9Y2I7 2098 aa13.62□□□□□ -0.23
DDX11-228ENST00000545115 PCSK5Q92824 1860 aa13.62□□□□□ -0.23
DDX11-228ENST00000545115 TCP11X1B4DZS4 312 aa13.62□□□□□ -0.23
DDX11-228ENST00000545115 BHMG1C9JSJ3 638 aaPredicted RBP13.62□□□□□ -0.23
DDX11-228ENST00000545115 F8W8V4 182 aa13.62□□□□□ -0.23
DDX11-228ENST00000545115 HCRTR1O43613 425 aa13.62□□□□□ -0.23
DDX11-228ENST00000545115 IGHEP01854 428 aa13.62□□□□□ -0.23
DDX11-228ENST00000545115 CDH17Q12864 832 aa13.62□□□□□ -0.23
DDX11-228ENST00000545115 KIR2DS3Q14952 304 aa13.62□□□□□ -0.23
DDX11-228ENST00000545115 KYNUQ16719 465 aa13.62□□□□□ -0.23
DDX11-228ENST00000545115 SLC5A12Q1EHB4 618 aa13.62□□□□□ -0.23
DDX11-228ENST00000545115 CCDC38Q502W7 563 aa13.62□□□□□ -0.23
DDX11-228ENST00000545115 C1orf189Q5VU69 101 aa13.62□□□□□ -0.23
DDX11-228ENST00000545115 TLDC1Q6P9B6 456 aa13.62□□□□□ -0.23
DDX11-228ENST00000545115 RAD9BQ6WBX8 426 aa13.62□□□□□ -0.23
DDX11-228ENST00000545115 TAB3Q8N5C8 712 aaPredicted RBP13.62□□□□□ -0.23
DDX11-228ENST00000545115 DNAAF3Q8N9W5 541 aa13.62□□□□□ -0.23
DDX11-228ENST00000545115 OR2Y1Q8NGV0 311 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms