RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 OVCH1Q7RTY7 1134 aa9.03□□□□□ -0.96
CHD4-212ENST00000545083 AMIGO1Q86WK6 493 aa9.03□□□□□ -0.96
CHD4-212ENST00000545083 CEP97Q8IW35 865 aa9.03□□□□□ -0.96
CHD4-212ENST00000545083 DNAJC22Q8N4W6 341 aa9.03□□□□□ -0.96
CHD4-212ENST00000545083 KCTD6Q8NC69 237 aa9.03□□□□□ -0.96
CHD4-212ENST00000545083 HM13Q8TCT9 377 aa9.03□□□□□ -0.96
CHD4-212ENST00000545083 ZNF398Q8TD17 642 aa9.03□□□□□ -0.96
CHD4-212ENST00000545083 ADAMTS18Q8TE60 1221 aa9.03□□□□□ -0.96
CHD4-212ENST00000545083 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.03□□□□□ -0.96
CHD4-212ENST00000545083 PSMF1Q92530 271 aa9.03□□□□□ -0.96
CHD4-212ENST00000545083 FKBP10Q96AY3 582 aa9.03□□□□□ -0.96
CHD4-212ENST00000545083 TRIM11Q96F44 468 aa9.03□□□□□ -0.96
CHD4-212ENST00000545083 RBM41Q96IZ5 413 aaKnown RBP9.03□□□□□ -0.96
CHD4-212ENST00000545083 LINC00615Q96LM1 132 aaPredicted RBP9.03□□□□□ -0.96
CHD4-212ENST00000545083 OR2A14Q96R47 310 aa9.03□□□□□ -0.96
CHD4-212ENST00000545083 LMF1Q96S06 567 aa9.03□□□□□ -0.96
CHD4-212ENST00000545083 SRPK1Q96SB4 655 aaKnown RBP9.03□□□□□ -0.96
CHD4-212ENST00000545083 HGH1Q9BTY7 390 aa9.03□□□□□ -0.96
CHD4-212ENST00000545083 TMUB1Q9BVT8 246 aa9.03□□□□□ -0.96
CHD4-212ENST00000545083 THAP2Q9H0W7 228 aa9.03□□□□□ -0.96
CHD4-212ENST00000545083 OR52A5Q9H2C5 316 aa9.03□□□□□ -0.96
CHD4-212ENST00000545083 SOX17Q9H6I2 414 aaPredicted RBP9.03□□□□□ -0.96
CHD4-212ENST00000545083 GLOD4Q9HC38 313 aa9.03□□□□□ -0.96
CHD4-212ENST00000545083 MCCC2Q9HCC0 563 aa9.03□□□□□ -0.96
CHD4-212ENST00000545083 SPHK1Q9NYA1 384 aa9.03□□□□□ -0.96
CHD4-212ENST00000545083 CTSFQ9UBX1 484 aa9.03□□□□□ -0.96
CHD4-212ENST00000545083 SEC14L3Q9UDX4 400 aa9.03□□□□□ -0.96
CHD4-212ENST00000545083 IP6K2Q9UHH9 426 aa9.03□□□□□ -0.96
CHD4-212ENST00000545083 TINAGQ9UJW2 476 aa9.03□□□□□ -0.96
CHD4-212ENST00000545083 MYO6Q9UM54 1294 aa9.03□□□□□ -0.96
CHD4-212ENST00000545083 ICKQ9UPZ9 632 aa9.03□□□□□ -0.96
CHD4-212ENST00000545083 PRRC2AP48634 2157 aaKnown RBP9.03□□□□□ -0.96
CHD4-212ENST00000545083 LOC285095A0A1B0GVY8 99 aa9.02□□□□□ -0.97
CHD4-212ENST00000545083 LRRC10BA6NIK2 292 aa9.02□□□□□ -0.97
CHD4-212ENST00000545083 CLDN14O95500 239 aa9.02□□□□□ -0.97
CHD4-212ENST00000545083 ONECUT2O95948 504 aa9.02□□□□□ -0.97
CHD4-212ENST00000545083 SKILP12757 684 aa9.02□□□□□ -0.97
CHD4-212ENST00000545083 CD1EP15812 388 aa9.02□□□□□ -0.97
CHD4-212ENST00000545083 ALAS2P22557 587 aa9.02□□□□□ -0.97
CHD4-212ENST00000545083 PDHA2P29803 388 aa9.02□□□□□ -0.97
CHD4-212ENST00000545083 SOX11P35716 441 aa9.02□□□□□ -0.97
CHD4-212ENST00000545083 WNT3AP56704 352 aa9.02□□□□□ -0.97
CHD4-212ENST00000545083 ITGA9Q13797 1035 aa9.02□□□□□ -0.97
CHD4-212ENST00000545083 BOP1Q14137 746 aaKnown RBP9.02□□□□□ -0.97
CHD4-212ENST00000545083 PDK2Q15119 407 aa9.02□□□□□ -0.97
CHD4-212ENST00000545083 INAQ16352 499 aa9.02□□□□□ -0.97
CHD4-212ENST00000545083 HADHQ16836 314 aaKnown RBP9.02□□□□□ -0.97
CHD4-212ENST00000545083 ZNF658BQ4V348 819 aaPredicted RBP9.02□□□□□ -0.97
CHD4-212ENST00000545083 SIRPB2Q5JXA9 342 aa9.02□□□□□ -0.97
CHD4-212ENST00000545083 ZDHHC20Q5W0Z9 365 aa9.02□□□□□ -0.97
CHD4-212ENST00000545083 CCDC70Q6NSX1 233 aa9.02□□□□□ -0.97
CHD4-212ENST00000545083 TLDC1Q6P9B6 456 aa9.02□□□□□ -0.97
CHD4-212ENST00000545083 NPNTQ6UXI9 565 aa9.02□□□□□ -0.97
CHD4-212ENST00000545083 TTLL10Q6ZVT0 673 aa9.02□□□□□ -0.97
CHD4-212ENST00000545083 DTWD1Q8N5C7 304 aa9.02□□□□□ -0.97
CHD4-212ENST00000545083 SLC25A41Q8N5S1 370 aa9.02□□□□□ -0.97
CHD4-212ENST00000545083 AMER2Q8N7J2 671 aa9.02□□□□□ -0.97
CHD4-212ENST00000545083 ACBD4Q8NC06 268 aa9.02□□□□□ -0.97
CHD4-212ENST00000545083 BLOC1S5Q8TDH9 187 aa9.02□□□□□ -0.97
CHD4-212ENST00000545083 CHTF18Q8WVB6 975 aa9.02□□□□□ -0.97
CHD4-212ENST00000545083 RAPGEF5Q92565 580 aa9.02□□□□□ -0.97
CHD4-212ENST00000545083 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.02□□□□□ -0.97
CHD4-212ENST00000545083 RNF157Q96PX1 679 aa9.02□□□□□ -0.97
CHD4-212ENST00000545083 SPOCK3Q9BQ16 436 aa9.02□□□□□ -0.97
CHD4-212ENST00000545083 CCM2Q9BSQ5 444 aa9.02□□□□□ -0.97
CHD4-212ENST00000545083 CHRNA10Q9GZZ6 450 aa9.02□□□□□ -0.97
CHD4-212ENST00000545083 ENKD1Q9H0I2 346 aa9.02□□□□□ -0.97
CHD4-212ENST00000545083 SLC26A1Q9H2B4 701 aa9.02□□□□□ -0.97
CHD4-212ENST00000545083 HSD3B7Q9H2F3 369 aa9.02□□□□□ -0.97
CHD4-212ENST00000545083 TRABDQ9H4I3 376 aa9.02□□□□□ -0.97
CHD4-212ENST00000545083 WDR54Q9H977 334 aa9.02□□□□□ -0.97
CHD4-212ENST00000545083 COG4Q9H9E3 785 aa9.02□□□□□ -0.97
CHD4-212ENST00000545083 ZNF160Q9HCG1 818 aa9.02□□□□□ -0.97
CHD4-212ENST00000545083 SEMA3GQ9NS98 782 aa9.02□□□□□ -0.97
CHD4-212ENST00000545083 IRAK4Q9NWZ3 460 aa9.02□□□□□ -0.97
CHD4-212ENST00000545083 ABI3Q9P2A4 366 aa9.02□□□□□ -0.97
CHD4-212ENST00000545083 HEY1Q9Y5J3 304 aa9.02□□□□□ -0.97
CHD4-212ENST00000545083 TRAV17A0A0B4J275 112 aa9.01□□□□□ -0.97
CHD4-212ENST00000545083 A0A1B0GX78 115 aa9.01□□□□□ -0.97
CHD4-212ENST00000545083 KLHL33A6NCF5 533 aa9.01□□□□□ -0.97
CHD4-212ENST00000545083 SLC19A2O60779 497 aa9.01□□□□□ -0.97
CHD4-212ENST00000545083 ABCB7O75027 752 aa9.01□□□□□ -0.97
CHD4-212ENST00000545083 PRAMEF1O95521 474 aa9.01□□□□□ -0.97
CHD4-212ENST00000545083 ALBP02768 609 aa9.01□□□□□ -0.97
CHD4-212ENST00000545083 CYP1A2P05177 515 aa9.01□□□□□ -0.97
CHD4-212ENST00000545083 TPBGLP0DKB5 382 aa9.01□□□□□ -0.97
CHD4-212ENST00000545083 AGAP20933 346 aa9.01□□□□□ -0.97
CHD4-212ENST00000545083 CDK11BP21127 795 aaKnown RBP9.01□□□□□ -0.97
CHD4-212ENST00000545083 CD68P34810 354 aaPredicted RBP9.01□□□□□ -0.97
CHD4-212ENST00000545083 PRLHRP49683 370 aa9.01□□□□□ -0.97
CHD4-212ENST00000545083 ART1P52961 327 aa9.01□□□□□ -0.97
CHD4-212ENST00000545083 CSNK1G2P78368 415 aa9.01□□□□□ -0.97
CHD4-212ENST00000545083 PMP22Q01453 160 aa9.01□□□□□ -0.97
CHD4-212ENST00000545083 KLHL30Q0D2K2 578 aa9.01□□□□□ -0.97
CHD4-212ENST00000545083 RBBP7Q16576 425 aa9.01□□□□□ -0.97
CHD4-212ENST00000545083 SLC5A12Q1EHB4 618 aa9.01□□□□□ -0.97
CHD4-212ENST00000545083 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.01□□□□□ -0.97
CHD4-212ENST00000545083 SARM1Q6SZW1 724 aa9.01□□□□□ -0.97
CHD4-212ENST00000545083 UNC5AQ6ZN44 842 aa9.01□□□□□ -0.97
CHD4-212ENST00000545083 MICALCLQ6ZW33 695 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms