RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 OR6C4Q8NGE1 309 aa12.74□□□□□ -0.37
DDX11-227ENST00000544652 OR5AR1Q8NGP9 310 aa12.74□□□□□ -0.37
DDX11-227ENST00000544652 KCTD4Q8WVF5 259 aa12.74□□□□□ -0.37
DDX11-227ENST00000544652 DLG3Q92796 817 aa12.74□□□□□ -0.37
DDX11-227ENST00000544652 KIAA1191Q96A73 305 aa12.74□□□□□ -0.37
DDX11-227ENST00000544652 NXNL1Q96CM4 212 aa12.74□□□□□ -0.37
DDX11-227ENST00000544652 CXorf40BQ96DE9 158 aa12.74□□□□□ -0.37
DDX11-227ENST00000544652 FERD3LQ96RJ6 166 aa12.74□□□□□ -0.37
DDX11-227ENST00000544652 MENTQ9BUN1 341 aa12.74□□□□□ -0.37
DDX11-227ENST00000544652 SLC12A9Q9BXP2 914 aa12.74□□□□□ -0.37
DDX11-227ENST00000544652 TWSG1Q9GZX9 223 aa12.74□□□□□ -0.37
DDX11-227ENST00000544652 VPS11Q9H270 941 aa12.74□□□□□ -0.37
DDX11-227ENST00000544652 TRIT1Q9H3H1 467 aaKnown RBP12.74□□□□□ -0.37
DDX11-227ENST00000544652 TFB2MQ9H5Q4 396 aaKnown RBP12.74□□□□□ -0.37
DDX11-227ENST00000544652 KIR3DX1Q9H7L2 352 aa12.74□□□□□ -0.37
DDX11-227ENST00000544652 NMRAL1Q9HBL8 299 aa12.74□□□□□ -0.37
DDX11-227ENST00000544652 TMBIM4Q9HC24 238 aa12.74□□□□□ -0.37
DDX11-227ENST00000544652 IMP3Q9NV31 184 aaKnown RBP12.74□□□□□ -0.37
DDX11-227ENST00000544652 MKS1Q9NXB0 559 aa12.74□□□□□ -0.37
DDX11-227ENST00000544652 POLG2Q9UHN1 485 aa12.74□□□□□ -0.37
DDX11-227ENST00000544652 ADAMTS6Q9UKP5 1117 aa12.74□□□□□ -0.37
DDX11-227ENST00000544652 RUVBL2Q9Y230 463 aaKnown RBP12.74□□□□□ -0.37
DDX11-227ENST00000544652 FRYLO94915 3013 aa12.73□□□□□ -0.37
DDX11-227ENST00000544652 PRAMEF33A0A0G2JMD5 474 aa12.73□□□□□ -0.37
DDX11-227ENST00000544652 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.73□□□□□ -0.37
DDX11-227ENST00000544652 ARHGEF33A8MVX0 844 aa12.73□□□□□ -0.37
DDX11-227ENST00000544652 CDC7O00311 574 aa12.73□□□□□ -0.37
DDX11-227ENST00000544652 TM4SF5O14894 197 aa12.73□□□□□ -0.37
DDX11-227ENST00000544652 RGS16O15492 202 aaPredicted RBP12.73□□□□□ -0.37
DDX11-227ENST00000544652 ZBTB14O43829 449 aa12.73□□□□□ -0.37
DDX11-227ENST00000544652 SH3BP5O60239 455 aa12.73□□□□□ -0.37
DDX11-227ENST00000544652 CATP04040 527 aaKnown RBP12.73□□□□□ -0.37
DDX11-227ENST00000544652 GSTA1P08263 222 aa12.73□□□□□ -0.37
DDX11-227ENST00000544652 ENO2P09104 434 aaPredicted RBP12.73□□□□□ -0.37
DDX11-227ENST00000544652 TPBGLP0DKB5 382 aa12.73□□□□□ -0.37
DDX11-227ENST00000544652 RPIAP49247 311 aa12.73□□□□□ -0.37
DDX11-227ENST00000544652 ACAP2Q15057 778 aa12.73□□□□□ -0.37
DDX11-227ENST00000544652 PPP1R3AQ16821 1122 aa12.73□□□□□ -0.37
DDX11-227ENST00000544652 FAM83EQ2M2I3 478 aa12.73□□□□□ -0.37
DDX11-227ENST00000544652 TSNAXIP1Q2TAA8 658 aa12.73□□□□□ -0.37
DDX11-227ENST00000544652 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.73□□□□□ -0.37
DDX11-227ENST00000544652 TMEM26Q6ZUK4 368 aa12.73□□□□□ -0.37
DDX11-227ENST00000544652 UBE2R2Q712K3 238 aaPredicted RBP12.73□□□□□ -0.37
DDX11-227ENST00000544652 RHEBL1Q8TAI7 183 aa12.73□□□□□ -0.37
DDX11-227ENST00000544652 MAGEC3Q8TD91 643 aa12.73□□□□□ -0.37
DDX11-227ENST00000544652 NETO1Q8TDF5 533 aa12.73□□□□□ -0.37
DDX11-227ENST00000544652 RHBDD1Q8TEB9 315 aa12.73□□□□□ -0.37
DDX11-227ENST00000544652 SETD7Q8WTS6 366 aaKnown RBP12.73□□□□□ -0.37
DDX11-227ENST00000544652 SKA2Q8WVK7 121 aaPredicted RBP12.73□□□□□ -0.37
DDX11-227ENST00000544652 RAD51AP1Q96B01 352 aa12.73□□□□□ -0.37
DDX11-227ENST00000544652 SH3KBP1Q96B97 665 aa12.73□□□□□ -0.37
DDX11-227ENST00000544652 PTERQ96BW5 349 aa12.73□□□□□ -0.37
DDX11-227ENST00000544652 CNDP2Q96KP4 475 aaKnown RBP12.73□□□□□ -0.37
DDX11-227ENST00000544652 RUFY1Q96T51 708 aa12.73□□□□□ -0.37
DDX11-227ENST00000544652 SH3GL2Q99962 352 aa12.73□□□□□ -0.37
DDX11-227ENST00000544652 STN1Q9H668 368 aaKnown RBP12.73□□□□□ -0.37
DDX11-227ENST00000544652 PARVBQ9HBI1 364 aa12.73□□□□□ -0.37
DDX11-227ENST00000544652 PLSCR2Q9NRY7 297 aa12.73□□□□□ -0.37
DDX11-227ENST00000544652 PCMTD2Q9NV79 361 aa12.73□□□□□ -0.37
DDX11-227ENST00000544652 SENP1Q9P0U3 644 aa12.73□□□□□ -0.37
DDX11-227ENST00000544652 TSR3Q9UJK0 312 aaKnown RBP12.73□□□□□ -0.37
DDX11-227ENST00000544652 PADI4Q9UM07 663 aa12.73□□□□□ -0.37
DDX11-227ENST00000544652 RNF215Q9Y6U7 377 aa12.73□□□□□ -0.37
DDX11-227ENST00000544652 MDC1Q14676 2089 aaKnown RBP12.73□□□□□ -0.37
DDX11-227ENST00000544652 NPEPPSL1A6NEC2 478 aa12.72□□□□□ -0.37
DDX11-227ENST00000544652 LILRA5A6NI73 299 aa12.72□□□□□ -0.37
DDX11-227ENST00000544652 C3orf80F5H4A9 247 aa12.72□□□□□ -0.37
DDX11-227ENST00000544652 GOLGA8RI6L899 631 aa12.72□□□□□ -0.37
DDX11-227ENST00000544652 MYO1CO00159 1063 aa12.72□□□□□ -0.37
DDX11-227ENST00000544652 BTN3A1O00481 513 aa12.72□□□□□ -0.37
DDX11-227ENST00000544652 ATP8B1O43520 1251 aa12.72□□□□□ -0.37
DDX11-227ENST00000544652 LDOC1O95751 146 aaPredicted RBP12.72□□□□□ -0.37
DDX11-227ENST00000544652 TOP3BO95985 862 aaKnown RBP12.72□□□□□ -0.37
DDX11-227ENST00000544652 MYZAPP0CAP1 466 aa12.72□□□□□ -0.37
DDX11-227ENST00000544652 ERGP11308 486 aa12.72□□□□□ -0.37
DDX11-227ENST00000544652 CKMT2P17540 419 aa12.72□□□□□ -0.37
DDX11-227ENST00000544652 KRT4P19013 534 aa12.72□□□□□ -0.37
DDX11-227ENST00000544652 TFEBP19484 476 aa12.72□□□□□ -0.37
DDX11-227ENST00000544652 CYP2A7P20853 494 aa12.72□□□□□ -0.37
DDX11-227ENST00000544652 ACP1P24666 158 aa12.72□□□□□ -0.37
DDX11-227ENST00000544652 GPR3P46089 330 aa12.72□□□□□ -0.37
DDX11-227ENST00000544652 BDKRB1P46663 353 aa12.72□□□□□ -0.37
DDX11-227ENST00000544652 DUSP3P51452 185 aaPredicted RBP12.72□□□□□ -0.37
DDX11-227ENST00000544652 CDKL1Q00532 357 aa12.72□□□□□ -0.37
DDX11-227ENST00000544652 GPR18Q14330 331 aa12.72□□□□□ -0.37
DDX11-227ENST00000544652 TSNQ15631 228 aaKnown RBP12.72□□□□□ -0.37
DDX11-227ENST00000544652 PHKG1Q16816 387 aa12.72□□□□□ -0.37
DDX11-227ENST00000544652 CCSMST1Q4G0I0 132 aa12.72□□□□□ -0.37
DDX11-227ENST00000544652 TECRLQ5HYJ1 363 aa12.72□□□□□ -0.37
DDX11-227ENST00000544652 GLRX5Q86SX6 157 aa12.72□□□□□ -0.37
DDX11-227ENST00000544652 ADAMTSL2Q86TH1 951 aa12.72□□□□□ -0.37
DDX11-227ENST00000544652 EXOC3L1Q86VI1 746 aa12.72□□□□□ -0.37
DDX11-227ENST00000544652 TRIM48Q8IWZ4 208 aa12.72□□□□□ -0.37
DDX11-227ENST00000544652 KIAA2013Q8IYS2 634 aa12.72□□□□□ -0.37
DDX11-227ENST00000544652 SPATA6LQ8N4H0 392 aa12.72□□□□□ -0.37
DDX11-227ENST00000544652 CFAP61Q8NHU2 1237 aa12.72□□□□□ -0.37
DDX11-227ENST00000544652 NAT6Q93015 286 aa12.72□□□□□ -0.37
DDX11-227ENST00000544652 CAMK1GQ96NX5 476 aa12.72□□□□□ -0.37
DDX11-227ENST00000544652 ATOH8Q96SQ7 321 aa12.72□□□□□ -0.37
DDX11-227ENST00000544652 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms