RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 INTS6Q9UL03 887 aaKnown RBP6.12□□□□□ -1.43
CPSF7-222ENST00000544585 KIAA1257Q9ULG3 409 aa6.12□□□□□ -1.43
CPSF7-222ENST00000544585 SUFUQ9UMX1 484 aa6.12□□□□□ -1.43
CPSF7-222ENST00000544585 SATB2Q9UPW6 733 aa6.12□□□□□ -1.43
CPSF7-222ENST00000544585 HS3ST3A1Q9Y663 406 aa6.12□□□□□ -1.43
CPSF7-222ENST00000544585 CSNK1G3Q9Y6M4 447 aa6.12□□□□□ -1.43
CPSF7-222ENST00000544585 MGAQ8IWI9 3026 aa6.12□□□□□ -1.43
CPSF7-222ENST00000544585 MYO9AB2RTY4 2548 aa6.11□□□□□ -1.43
CPSF7-222ENST00000544585 MUC22E2RYF6 1773 aaPredicted RBP6.11□□□□□ -1.43
CPSF7-222ENST00000544585 GOLGA6L7A0A1B0GV03 622 aa6.11□□□□□ -1.43
CPSF7-222ENST00000544585 EME2A4GXA9 379 aaPredicted RBP6.11□□□□□ -1.43
CPSF7-222ENST00000544585 GOLGA6L6A8MZA4 724 aa6.11□□□□□ -1.43
CPSF7-222ENST00000544585 C1QTNF3-AMACRE9PGA6 284 aa6.11□□□□□ -1.43
CPSF7-222ENST00000544585 TMX2-CTNND1H3BSU7 103 aa6.11□□□□□ -1.43
CPSF7-222ENST00000544585 XPO1O14980 1071 aaKnown RBP6.11□□□□□ -1.43
CPSF7-222ENST00000544585 CTIFO43310 598 aaKnown RBP6.11□□□□□ -1.43
CPSF7-222ENST00000544585 HNRNPRO43390 633 aaKnown RBP6.11□□□□□ -1.43
CPSF7-222ENST00000544585 TNFSF15O95150 251 aa6.11□□□□□ -1.43
CPSF7-222ENST00000544585 GIMD1P0DJR0 217 aa6.11□□□□□ -1.43
CPSF7-222ENST00000544585 TMEM225BP0DP42 221 aa6.11□□□□□ -1.43
CPSF7-222ENST00000544585 GP1BBP13224 206 aa6.11□□□□□ -1.43
CPSF7-222ENST00000544585 ZNF18P17022 549 aa6.11□□□□□ -1.43
CPSF7-222ENST00000544585 CD58P19256 250 aa6.11□□□□□ -1.43
CPSF7-222ENST00000544585 MAT2AP31153 395 aaKnown RBP6.11□□□□□ -1.43
CPSF7-222ENST00000544585 APOBEC3AP31941 199 aaPredicted RBP6.11□□□□□ -1.43
CPSF7-222ENST00000544585 THBS4P35443 961 aa6.11□□□□□ -1.43
CPSF7-222ENST00000544585 PIK3CAP42336 1068 aa6.11□□□□□ -1.43
CPSF7-222ENST00000544585 PSMD8P48556 350 aa6.11□□□□□ -1.43
CPSF7-222ENST00000544585 VAMP7P51809 220 aa6.11□□□□□ -1.43
CPSF7-222ENST00000544585 NUCB2P80303 420 aa6.11□□□□□ -1.43
CPSF7-222ENST00000544585 TBL3Q12788 808 aaKnown RBP6.11□□□□□ -1.43
CPSF7-222ENST00000544585 CDH18Q13634 790 aa6.11□□□□□ -1.43
CPSF7-222ENST00000544585 SEC23BQ15437 767 aa6.11□□□□□ -1.43
CPSF7-222ENST00000544585 ZSCAN23Q3MJ62 389 aa6.11□□□□□ -1.43
CPSF7-222ENST00000544585 LINC00303Q3SY05 128 aa6.11□□□□□ -1.43
CPSF7-222ENST00000544585 FAM69AQ5T7M9 428 aa6.11□□□□□ -1.43
CPSF7-222ENST00000544585 MFSD4BQ5TF39 518 aa6.11□□□□□ -1.43
CPSF7-222ENST00000544585 LIPMQ5VYY2 423 aa6.11□□□□□ -1.43
CPSF7-222ENST00000544585 ANKRD40Q6AI12 368 aa6.11□□□□□ -1.43
CPSF7-222ENST00000544585 CCDC144NLQ6NUI1 221 aa6.11□□□□□ -1.43
CPSF7-222ENST00000544585 TMCO3Q6UWJ1 677 aa6.11□□□□□ -1.43
CPSF7-222ENST00000544585 INTS8Q75QN2 995 aaKnown RBP6.11□□□□□ -1.43
CPSF7-222ENST00000544585 SIX6OS1Q8N1H7 587 aa6.11□□□□□ -1.43
CPSF7-222ENST00000544585 Q8NA96 180 aa6.11□□□□□ -1.43
CPSF7-222ENST00000544585 SLC4A11Q8NBS3 891 aa6.11□□□□□ -1.43
CPSF7-222ENST00000544585 IRGQQ8WZA9 623 aa6.11□□□□□ -1.43
CPSF7-222ENST00000544585 TMEM125Q96AQ2 219 aa6.11□□□□□ -1.43
CPSF7-222ENST00000544585 DHX58Q96C10 678 aa6.11□□□□□ -1.43
CPSF7-222ENST00000544585 SGF29Q96ES7 293 aa6.11□□□□□ -1.43
CPSF7-222ENST00000544585 PRR11Q96HE9 360 aaPredicted RBP6.11□□□□□ -1.43
CPSF7-222ENST00000544585 GNRHR2Q96P88 292 aa6.11□□□□□ -1.43
CPSF7-222ENST00000544585 ZSCAN16Q9H4T2 348 aaPredicted RBP6.11□□□□□ -1.43
CPSF7-222ENST00000544585 APOBEC3GQ9HC16 384 aaKnown RBP6.11□□□□□ -1.43
CPSF7-222ENST00000544585 KCNE5Q9UJ90 142 aa6.11□□□□□ -1.43
CPSF7-222ENST00000544585 VPS28Q9UK41 221 aa6.11□□□□□ -1.43
CPSF7-222ENST00000544585 DRG1Q9Y295 367 aaKnown RBP6.11□□□□□ -1.43
CPSF7-222ENST00000544585 UBE2J1Q9Y385 318 aaPredicted RBP6.11□□□□□ -1.43
CPSF7-222ENST00000544585 ENTPD2Q9Y5L3 495 aa6.11□□□□□ -1.43
CPSF7-222ENST00000544585 CFAP46Q8IYW2 2715 aa6.11□□□□□ -1.43
CPSF7-222ENST00000544585 ITPR3Q14573 2671 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 CCDC187A0A096LP49 1063 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.1□□□□□ -1.43
CPSF7-222ENST00000544585 GXYLT2A0PJZ3 443 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 CPED1A4D0V7 1026 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 VPS37CA5D8V6 355 aaPredicted RBP6.1□□□□□ -1.43
CPSF7-222ENST00000544585 YJEFN3A6XGL0 299 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 E7ENQ6 273 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 K7ESM1 405 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 TSPAN4O14817 238 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 MCF2LO15068 1137 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 ZNF185O15231 689 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 ALOX15BO15296 676 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 SLC31A1O15431 190 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 CALUO43852 315 aaPredicted RBP6.1□□□□□ -1.43
CPSF7-222ENST00000544585 NOBOXO60393 691 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 RTN2O75298 545 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 LUC7L3O95232 432 aaKnown RBP6.1□□□□□ -1.43
CPSF7-222ENST00000544585 SCGB1D1O95968 90 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 IGLV3-27P01718 113 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 VDRP11473 427 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 KRT13P13646 458 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 ITGB6P18564 788 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 TGM2P21980 687 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 AKT2P31751 481 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 GTF2H1P32780 548 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 DRD3P35462 400 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 GGT5P36269 586 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 SGSHP51688 502 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 DGKQP52824 942 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 PLK1P53350 603 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 RAD23BP54727 409 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 BST2Q10589 180 aaKnown RBP6.1□□□□□ -1.43
CPSF7-222ENST00000544585 EIF3IQ13347 325 aaKnown RBP6.1□□□□□ -1.43
CPSF7-222ENST00000544585 ZNF177Q13360 481 aaPredicted RBP6.1□□□□□ -1.43
CPSF7-222ENST00000544585 STK38Q15208 465 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 ACCSLQ4AC99 568 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 DCAF6Q58WW2 860 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 MS4A13Q5J8X5 152 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 CBWD5Q5RIA9 395 aa6.1□□□□□ -1.43
CPSF7-222ENST00000544585 KRT39Q6A163 491 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms