RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 OSGEPL1Q9H4B0 414 aa29.65■■■□□ 2.34
CCM2-219ENST00000544363 SLC32A1Q9H598 525 aa29.65■■■□□ 2.34
CCM2-219ENST00000544363 STK38LQ9Y2H1 464 aa29.65■■■□□ 2.34
CCM2-219ENST00000544363 ANGPTL3Q9Y5C1 460 aa29.65■■■□□ 2.34
CCM2-219ENST00000544363 A0A1B0GTL3 188 aa29.64■■■□□ 2.34
CCM2-219ENST00000544363 IFRD1O00458 451 aaPredicted RBP29.64■■■□□ 2.34
CCM2-219ENST00000544363 AZIN1O14977 448 aa29.64■■■□□ 2.34
CCM2-219ENST00000544363 SLC35G4P0C7Q5 338 aa29.64■■■□□ 2.34
CCM2-219ENST00000544363 PKNOX1P55347 436 aa29.64■■■□□ 2.34
CCM2-219ENST00000544363 PDCD2Q16342 344 aaPredicted RBP29.64■■■□□ 2.34
CCM2-219ENST00000544363 USP39Q53GS9 565 aaKnown RBP29.64■■■□□ 2.34
CCM2-219ENST00000544363 CLEC6AQ6EIG7 209 aa29.64■■■□□ 2.34
CCM2-219ENST00000544363 GPRIN3Q6ZVF9 776 aa29.64■■■□□ 2.34
CCM2-219ENST00000544363 LRRC70Q7Z2Q7 622 aa29.64■■■□□ 2.34
CCM2-219ENST00000544363 SYVN1Q86TM6 617 aa29.64■■■□□ 2.34
CCM2-219ENST00000544363 MAGEC3Q8TD91 643 aa29.64■■■□□ 2.34
CCM2-219ENST00000544363 TFGQ92734 400 aaPredicted RBP29.64■■■□□ 2.34
CCM2-219ENST00000544363 TSACCQ96A04 125 aaPredicted RBP29.64■■■□□ 2.34
CCM2-219ENST00000544363 IPPKQ9H8X2 491 aa29.64■■■□□ 2.34
CCM2-219ENST00000544363 ZNF225Q9UK10 706 aa29.64■■■□□ 2.34
CCM2-219ENST00000544363 ASF1AQ9Y294 204 aa29.64■■■□□ 2.34
CCM2-219ENST00000544363 OR7A17O14581 309 aa29.63■■■□□ 2.33
CCM2-219ENST00000544363 GIPC1O14908 333 aa29.63■■■□□ 2.33
CCM2-219ENST00000544363 RPL10P27635 214 aaKnown RBP29.63■■■□□ 2.33
CCM2-219ENST00000544363 PRDX3P30048 256 aaKnown RBP29.63■■■□□ 2.33
CCM2-219ENST00000544363 PIK3CGP48736 1102 aa29.63■■■□□ 2.33
CCM2-219ENST00000544363 CLCNKAP51800 687 aa29.63■■■□□ 2.33
CCM2-219ENST00000544363 SRP54P61011 504 aaKnown RBP29.63■■■□□ 2.33
CCM2-219ENST00000544363 PTK2BQ14289 1009 aa29.63■■■□□ 2.33
CCM2-219ENST00000544363 PTCHD3Q3KNS1 767 aa29.63■■■□□ 2.33
CCM2-219ENST00000544363 SLC9B1Q4ZJI4 515 aa29.63■■■□□ 2.33
CCM2-219ENST00000544363 CAPRIN2Q6IMN6 1127 aaKnown RBP29.63■■■□□ 2.33
CCM2-219ENST00000544363 DEFB119Q8N690 84 aa29.63■■■□□ 2.33
CCM2-219ENST00000544363 LRRC37BQ96QE4 947 aa29.63■■■□□ 2.33
CCM2-219ENST00000544363 STOX2Q9P2F5 926 aaPredicted RBP29.63■■■□□ 2.33
CCM2-219ENST00000544363 TRPC5OSA6NMA1 111 aa29.63■■■□□ 2.33
CCM2-219ENST00000544363 MYO1CO00159 1063 aa29.63■■■□□ 2.33
CCM2-219ENST00000544363 EPB42P16452 691 aa29.63■■■□□ 2.33
CCM2-219ENST00000544363 IDSP22304 550 aa29.63■■■□□ 2.33
CCM2-219ENST00000544363 CD27P26842 260 aa29.63■■■□□ 2.33
CCM2-219ENST00000544363 SERPINB3P29508 390 aa29.63■■■□□ 2.33
CCM2-219ENST00000544363 RPL6Q02878 288 aaKnown RBP29.63■■■□□ 2.33
CCM2-219ENST00000544363 TUBB3Q13509 450 aa29.63■■■□□ 2.33
CCM2-219ENST00000544363 KANK2Q63ZY3 851 aa29.63■■■□□ 2.33
CCM2-219ENST00000544363 SLC36A4Q6YBV0 504 aa29.63■■■□□ 2.33
CCM2-219ENST00000544363 RD3Q7Z3Z2 195 aa29.63■■■□□ 2.33
CCM2-219ENST00000544363 SLC22A18ASQ8N1D0 253 aa29.63■■■□□ 2.33
CCM2-219ENST00000544363 FITM2Q8N6M3 262 aa29.63■■■□□ 2.33
CCM2-219ENST00000544363 OR52B6Q8NGF0 335 aa29.63■■■□□ 2.33
CCM2-219ENST00000544363 STON2Q8WXE9 905 aa29.63■■■□□ 2.33
CCM2-219ENST00000544363 SKA1Q96BD8 255 aa29.63■■■□□ 2.33
CCM2-219ENST00000544363 GPR27Q9NS67 375 aa29.63■■■□□ 2.33
CCM2-219ENST00000544363 PLXND1Q9Y4D7 1925 aa29.63■■■□□ 2.33
CCM2-219ENST00000544363 HGSO14964 777 aaPredicted RBP29.62■■■□□ 2.33
CCM2-219ENST00000544363 OTCP00480 354 aa29.62■■■□□ 2.33
CCM2-219ENST00000544363 JUNP05412 331 aaKnown RBP29.62■■■□□ 2.33
CCM2-219ENST00000544363 ALG11Q2TAA5 492 aa29.62■■■□□ 2.33
CCM2-219ENST00000544363 UGT3A2Q3SY77 523 aa29.62■■■□□ 2.33
CCM2-219ENST00000544363 AGTRAPQ6RW13 159 aa29.62■■■□□ 2.33
CCM2-219ENST00000544363 MTDHQ86UE4 582 aaKnown RBP29.62■■■□□ 2.33
CCM2-219ENST00000544363 ALYREFQ86V81 257 aaKnown RBP29.62■■■□□ 2.33
CCM2-219ENST00000544363 OR9A1PQ8NGU1 263 aa29.62■■■□□ 2.33
CCM2-219ENST00000544363 ATP6V1E2Q96A05 226 aa29.62■■■□□ 2.33
CCM2-219ENST00000544363 ATG10Q9H0Y0 220 aa29.62■■■□□ 2.33
CCM2-219ENST00000544363 CIDEBQ9UHD4 219 aa29.62■■■□□ 2.33
CCM2-219ENST00000544363 PNMA8BQ9ULN7 279 aaPredicted RBP29.62■■■□□ 2.33
CCM2-219ENST00000544363 WDR37Q9Y2I8 494 aa29.62■■■□□ 2.33
CCM2-219ENST00000544363 ST14Q9Y5Y6 855 aa29.62■■■□□ 2.33
CCM2-219ENST00000544363 SCAMP1O15126 338 aa29.61■■■□□ 2.33
CCM2-219ENST00000544363 SLC16A8O95907 504 aa29.61■■■□□ 2.33
CCM2-219ENST00000544363 RPN2P04844 631 aa29.61■■■□□ 2.33
CCM2-219ENST00000544363 THEGLP0DJG4 465 aa29.61■■■□□ 2.33
CCM2-219ENST00000544363 IMPA1P29218 277 aa29.61■■■□□ 2.33
CCM2-219ENST00000544363 CCNG1P51959 295 aa29.61■■■□□ 2.33
CCM2-219ENST00000544363 FOXA1P55317 472 aa29.61■■■□□ 2.33
CCM2-219ENST00000544363 BTKQ06187 659 aa29.61■■■□□ 2.33
CCM2-219ENST00000544363 PHC3Q8NDX5 983 aa29.61■■■□□ 2.33
CCM2-219ENST00000544363 CCT6BQ92526 530 aa29.61■■■□□ 2.33
CCM2-219ENST00000544363 SLC6A18Q96N87 628 aa29.61■■■□□ 2.33
CCM2-219ENST00000544363 KCNA7Q96RP8 456 aa29.61■■■□□ 2.33
CCM2-219ENST00000544363 AASDHPPTQ9NRN7 309 aa29.61■■■□□ 2.33
CCM2-219ENST00000544363 SPATA6Q9NWH7 488 aaPredicted RBP29.61■■■□□ 2.33
CCM2-219ENST00000544363 KATNA1O75449 491 aa29.6■■■□□ 2.33
CCM2-219ENST00000544363 SKAP2O75563 359 aaPredicted RBP29.6■■■□□ 2.33
CCM2-219ENST00000544363 CRCPO75575 148 aa29.6■■■□□ 2.33
CCM2-219ENST00000544363 WDR47O94967 919 aa29.6■■■□□ 2.33
CCM2-219ENST00000544363 AOC1P19801 751 aa29.6■■■□□ 2.33
CCM2-219ENST00000544363 HOXA6P31267 233 aa29.6■■■□□ 2.33
CCM2-219ENST00000544363 ERVPABLB-1P60509 514 aa29.6■■■□□ 2.33
CCM2-219ENST00000544363 TRAF3Q13114 568 aa29.6■■■□□ 2.33
CCM2-219ENST00000544363 LRP8Q14114 963 aa29.6■■■□□ 2.33
CCM2-219ENST00000544363 DCUN1D3Q8IWE4 304 aa29.6■■■□□ 2.33
CCM2-219ENST00000544363 KLHDC8AQ8IYD2 350 aa29.6■■■□□ 2.33
CCM2-219ENST00000544363 OR5AR1Q8NGP9 310 aa29.6■■■□□ 2.33
CCM2-219ENST00000544363 OR5K2Q8NHB8 316 aa29.6■■■□□ 2.33
CCM2-219ENST00000544363 RAD51AP1Q96B01 352 aa29.6■■■□□ 2.33
CCM2-219ENST00000544363 PYCR2Q96C36 320 aa29.6■■■□□ 2.33
CCM2-219ENST00000544363 PPP1R36Q96LQ0 422 aa29.6■■■□□ 2.33
CCM2-219ENST00000544363 DNAJC15Q9Y5T4 150 aa29.6■■■□□ 2.33
CCM2-219ENST00000544363 SLCO1B1Q9Y6L6 691 aa29.6■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms