RNA–Protein interactions for RNA: ENST00000543794.5

LPCAT3-211, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-211ENST00000543794 DEFB110Q30KQ9 67 aa19.25■□□□□ 0.67
LPCAT3-211ENST00000543794 GPR33Q49SQ1 333 aa19.25■□□□□ 0.67
LPCAT3-211ENST00000543794 NKAIN1Q4KMZ8 207 aa19.25■□□□□ 0.67
LPCAT3-211ENST00000543794 TLDC1Q6P9B6 456 aa19.25■□□□□ 0.67
LPCAT3-211ENST00000543794 ZNF449Q6P9G9 518 aa19.25■□□□□ 0.67
LPCAT3-211ENST00000543794 UNC5AQ6ZN44 842 aa19.25■□□□□ 0.67
LPCAT3-211ENST00000543794 TRIM73Q86UV7 250 aa19.25■□□□□ 0.67
LPCAT3-211ENST00000543794 TMEM151BQ8IW70 566 aa19.25■□□□□ 0.67
LPCAT3-211ENST00000543794 HAUS1Q96CS2 278 aa19.25■□□□□ 0.67
LPCAT3-211ENST00000543794 WDR77Q9BQA1 342 aaPredicted RBP19.25■□□□□ 0.67
LPCAT3-211ENST00000543794 APOL2Q9BQE5 337 aa19.25■□□□□ 0.67
LPCAT3-211ENST00000543794 ANP32EQ9BTT0 268 aa19.25■□□□□ 0.67
LPCAT3-211ENST00000543794 VPS37BQ9H9H4 285 aa19.25■□□□□ 0.67
LPCAT3-211ENST00000543794 SRPK3Q9UPE1 567 aa19.25■□□□□ 0.67
LPCAT3-211ENST00000543794 CSAG2Q9Y5P2 127 aa19.25■□□□□ 0.67
LPCAT3-211ENST00000543794 MDC1Q14676 2089 aaKnown RBP19.24■□□□□ 0.67
LPCAT3-211ENST00000543794 hCG_1818297A0A087WSY0 165 aa19.24■□□□□ 0.67
LPCAT3-211ENST00000543794 ZSCAN9O15535 394 aaPredicted RBP19.24■□□□□ 0.67
LPCAT3-211ENST00000543794 HNRNPRO43390 633 aaKnown RBP19.24■□□□□ 0.67
LPCAT3-211ENST00000543794 ZRANB2O95218 330 aaKnown RBP eCLIP19.24■□□□□ 0.67
LPCAT3-211ENST00000543794 RBL1P28749 1068 aa19.24■□□□□ 0.67
LPCAT3-211ENST00000543794 ZNF140P52738 457 aaPredicted RBP19.24■□□□□ 0.67
LPCAT3-211ENST00000543794 TMPRSS15P98073 1019 aa19.24■□□□□ 0.67
LPCAT3-211ENST00000543794 IGFL2Q6UWQ7 119 aa19.24■□□□□ 0.67
LPCAT3-211ENST00000543794 DNAJC22Q8N4W6 341 aa19.24■□□□□ 0.67
LPCAT3-211ENST00000543794 ZNF655Q8N720 491 aaPredicted RBP19.24■□□□□ 0.67
LPCAT3-211ENST00000543794 FLVCR1-AS1Q8TAF5 88 aa19.24■□□□□ 0.67
LPCAT3-211ENST00000543794 PPP4R1Q8TF05 950 aa19.24■□□□□ 0.67
LPCAT3-211ENST00000543794 CHP1Q99653 195 aa19.24■□□□□ 0.67
LPCAT3-211ENST00000543794 TXLNGQ9NUQ3 528 aa19.24■□□□□ 0.67
LPCAT3-211ENST00000543794 SPTLC3Q9NUV7 552 aa19.24■□□□□ 0.67
LPCAT3-211ENST00000543794 ZNHIT6Q9NWK9 470 aaKnown RBP19.24■□□□□ 0.67
LPCAT3-211ENST00000543794 ENTPD4Q9Y227 616 aa19.24■□□□□ 0.67
LPCAT3-211ENST00000543794 AAR2Q9Y312 384 aaKnown RBP19.24■□□□□ 0.67
LPCAT3-211ENST00000543794 DIDO1Q9BTC0 2240 aaKnown RBP19.24■□□□□ 0.67
LPCAT3-211ENST00000543794 FER1L5A0AVI2 2057 aa19.23■□□□□ 0.67
LPCAT3-211ENST00000543794 TRBV5-4A0A0C4DH59 114 aa19.23■□□□□ 0.67
LPCAT3-211ENST00000543794 GSTM1P09488 218 aa19.23■□□□□ 0.67
LPCAT3-211ENST00000543794 ATXN8OSP0DMR3 200 aa19.23■□□□□ 0.67
LPCAT3-211ENST00000543794 SHMT2P34897 504 aa19.23■□□□□ 0.67
LPCAT3-211ENST00000543794 CDKN1CP49918 316 aaPredicted RBP19.23■□□□□ 0.67
LPCAT3-211ENST00000543794 PER3P56645 1201 aa19.23■□□□□ 0.67
LPCAT3-211ENST00000543794 GSTM4Q03013 218 aa19.23■□□□□ 0.67
LPCAT3-211ENST00000543794 SLC9A5Q14940 896 aa19.23■□□□□ 0.67
LPCAT3-211ENST00000543794 ZRSR2Q15696 482 aaKnown RBP19.23■□□□□ 0.67
LPCAT3-211ENST00000543794 ITPRIPL1Q6GPH6 555 aa19.23■□□□□ 0.67
LPCAT3-211ENST00000543794 RCOR2Q8IZ40 523 aa19.23■□□□□ 0.67
LPCAT3-211ENST00000543794 COG1Q8WTW3 980 aa19.23■□□□□ 0.67
LPCAT3-211ENST00000543794 C10orf88Q9H8K7 445 aa19.23■□□□□ 0.67
LPCAT3-211ENST00000543794 SLC22A11Q9NSA0 550 aa19.23■□□□□ 0.67
LPCAT3-211ENST00000543794 SPHK1Q9NYA1 384 aa19.23■□□□□ 0.67
LPCAT3-211ENST00000543794 NOVA2Q9UNW9 492 aaKnown RBP19.23■□□□□ 0.67
LPCAT3-211ENST00000543794 OSGIN2Q9Y236 505 aa19.23■□□□□ 0.67
LPCAT3-211ENST00000543794 ALG6Q9Y672 507 aa19.23■□□□□ 0.67
LPCAT3-211ENST00000543794 GOLGA6L19H0YKK7 550 aa19.22■□□□□ 0.67
LPCAT3-211ENST00000543794 E2F3O00716 465 aa19.22■□□□□ 0.67
LPCAT3-211ENST00000543794 CHRM5P08912 532 aaPredicted RBP19.22■□□□□ 0.67
LPCAT3-211ENST00000543794 TPBGLP0DKB5 382 aa19.22■□□□□ 0.67
LPCAT3-211ENST00000543794 EDN3P14138 238 aa19.22■□□□□ 0.67
LPCAT3-211ENST00000543794 PRF1P14222 555 aa19.22■□□□□ 0.67
LPCAT3-211ENST00000543794 POU3F2P20265 443 aaPredicted RBP19.22■□□□□ 0.67
LPCAT3-211ENST00000543794 MMP11P24347 488 aa19.22■□□□□ 0.67
LPCAT3-211ENST00000543794 ITGA3P26006 1051 aa19.22■□□□□ 0.67
LPCAT3-211ENST00000543794 ACRV1P26436 265 aa19.22■□□□□ 0.67
LPCAT3-211ENST00000543794 MC4RP32245 332 aa19.22■□□□□ 0.67
LPCAT3-211ENST00000543794 TSFMP43897 325 aaKnown RBP19.22■□□□□ 0.67
LPCAT3-211ENST00000543794 HIF1AQ16665 826 aa19.22■□□□□ 0.67
LPCAT3-211ENST00000543794 DENND5AQ6IQ26 1287 aa19.22■□□□□ 0.67
LPCAT3-211ENST00000543794 SERPINA9Q86WD7 417 aa19.22■□□□□ 0.67
LPCAT3-211ENST00000543794 KATNAL2Q8IYT4 538 aa19.22■□□□□ 0.67
LPCAT3-211ENST00000543794 CLDN19Q8N6F1 224 aa19.22■□□□□ 0.67
LPCAT3-211ENST00000543794 OR5AR1Q8NGP9 310 aa19.22■□□□□ 0.67
LPCAT3-211ENST00000543794 DNAJB14Q8TBM8 379 aa19.22■□□□□ 0.67
LPCAT3-211ENST00000543794 GRHL3Q8TE85 626 aa19.22■□□□□ 0.67
LPCAT3-211ENST00000543794 MARVELD3Q96A59 401 aa19.22■□□□□ 0.67
LPCAT3-211ENST00000543794 CCDC42Q96M95 316 aa19.22■□□□□ 0.67
LPCAT3-211ENST00000543794 NDC1Q9BTX1 674 aa19.22■□□□□ 0.67
LPCAT3-211ENST00000543794 NHEJ1Q9H9Q4 299 aaPredicted RBP19.22■□□□□ 0.67
LPCAT3-211ENST00000543794 OR6C2Q9NZP2 312 aa19.22■□□□□ 0.67
LPCAT3-211ENST00000543794 INTUQ9ULD6 942 aa19.22■□□□□ 0.67
LPCAT3-211ENST00000543794 PLCL2Q9UPR0 1127 aa19.22■□□□□ 0.67
LPCAT3-211ENST00000543794 CCDC88CQ9P219 2028 aa19.22■□□□□ 0.67
LPCAT3-211ENST00000543794 CNTRLQ7Z7A1 2325 aa19.22■□□□□ 0.67
LPCAT3-211ENST00000543794 A0A0J9YY10 115 aa19.21■□□□□ 0.67
LPCAT3-211ENST00000543794 H7C0C1 242 aa19.21■□□□□ 0.67
LPCAT3-211ENST00000543794 CCL22O00626 93 aa19.21■□□□□ 0.67
LPCAT3-211ENST00000543794 ONECUT2O95948 504 aa19.21■□□□□ 0.67
LPCAT3-211ENST00000543794 ACADLP28330 430 aa19.21■□□□□ 0.67
LPCAT3-211ENST00000543794 GCGRP47871 477 aa19.21■□□□□ 0.67
LPCAT3-211ENST00000543794 ATP5OP48047 213 aa19.21■□□□□ 0.67
LPCAT3-211ENST00000543794 PRAMEF13Q5VWM6 474 aa19.21■□□□□ 0.67
LPCAT3-211ENST00000543794 SP5Q6BEB4 398 aaPredicted RBP19.21■□□□□ 0.67
LPCAT3-211ENST00000543794 BBS12Q6ZW61 710 aa19.21■□□□□ 0.67
LPCAT3-211ENST00000543794 TBC1D21Q8IYX1 336 aa19.21■□□□□ 0.67
LPCAT3-211ENST00000543794 FAR1Q8WVX9 515 aa19.21■□□□□ 0.67
LPCAT3-211ENST00000543794 ARNT2Q9HBZ2 717 aa19.21■□□□□ 0.67
LPCAT3-211ENST00000543794 SLC6A20Q9NP91 592 aa19.21■□□□□ 0.67
LPCAT3-211ENST00000543794 POLG2Q9UHN1 485 aa19.21■□□□□ 0.67
LPCAT3-211ENST00000543794 FBXL4Q9UKA2 621 aa19.21■□□□□ 0.67
LPCAT3-211ENST00000543794 ASF1AQ9Y294 204 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms