RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 CLDN6P56747 220 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 INSM1Q01101 510 aaPredicted RBP6.14□□□□□ -1.43
LTBR-212ENST00000543542 CSHL1Q14406 222 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 ZNF658BQ4V348 819 aaPredicted RBP6.14□□□□□ -1.43
LTBR-212ENST00000543542 XKR5Q6UX68 686 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 FAM92BQ6ZTR7 304 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 ZNF438Q7Z4V0 828 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 CMC1Q7Z7K0 106 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 TAX1BP1Q86VP1 789 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 AMIGO1Q86WK6 493 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 PLXDC1Q8IUK5 500 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 CEP97Q8IW35 865 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 CHCHD4Q8N4Q1 142 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 C2orf73Q8N5S3 287 aaPredicted RBP6.14□□□□□ -1.43
LTBR-212ENST00000543542 GIMAP7Q8NHV1 300 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 MCOLN3Q8TDD5 553 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 AENQ8WTP8 325 aaKnown RBP6.14□□□□□ -1.43
LTBR-212ENST00000543542 SLC44A1Q8WWI5 657 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 ADAMTS14Q8WXS8 1223 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 CAVIN3Q969G5 261 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 ALKBH8Q96BT7 664 aaKnown RBP6.14□□□□□ -1.43
LTBR-212ENST00000543542 ZDHHC12Q96GR4 267 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 SCYL1Q96KG9 808 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 TMEM74Q96NL1 305 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 GPR22Q99680 433 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 EGFL8Q99944 293 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 DPYSL5Q9BPU6 564 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 RAB11FIP5Q9BXF6 653 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 FUT8Q9BYC5 575 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 UNKQ9C0B0 810 aaKnown RBP6.14□□□□□ -1.43
LTBR-212ENST00000543542 STRADBQ9C0K7 418 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 UCK1Q9HA47 277 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 ARGLU1Q9NWB6 273 aaPredicted RBP6.14□□□□□ -1.43
LTBR-212ENST00000543542 TOR4AQ9NXH8 423 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.14□□□□□ -1.43
LTBR-212ENST00000543542 PSMC3IPQ9P2W1 217 aaPredicted RBP6.14□□□□□ -1.43
LTBR-212ENST00000543542 CTNNAL1Q9UBT7 734 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 CLCA2Q9UQC9 943 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 ACOT9Q9Y305 439 aa6.14□□□□□ -1.43
LTBR-212ENST00000543542 A0A087X1B8 175 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 A0A1W2PQM1 296 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 PIPSLA2A3N6 862 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 FAM149AA5PLN7 773 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 NPEPPSL1A6NEC2 478 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 OR5K3A6NET4 321 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 ARHGEF33A8MVX0 844 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 C2orf74A8MZ97 194 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 TRIM49D1C9J1S8 452 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 D6RAR5 112 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 TMX2-CTNND1H3BSU7 103 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 MATN2O00339 956 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 RASGRF2O14827 1237 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 CASC3O15234 703 aaKnown RBP6.13□□□□□ -1.43
LTBR-212ENST00000543542 SLC16A5O15375 505 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 CAPN5O15484 640 aaPredicted RBP6.13□□□□□ -1.43
LTBR-212ENST00000543542 HYAL3O43820 417 aaPredicted RBP6.13□□□□□ -1.43
LTBR-212ENST00000543542 CSO75390 466 aaKnown RBP6.13□□□□□ -1.43
LTBR-212ENST00000543542 PSIP1O75475 530 aaKnown RBP6.13□□□□□ -1.43
LTBR-212ENST00000543542 MATN4O95460 622 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 GUCA1CO95843 209 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 C1QAP02745 245 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 MT-ND3P03897 115 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 SHBGP04278 402 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 MPOP05164 745 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 ZNF37AP17032 561 aaPredicted RBP6.13□□□□□ -1.43
LTBR-212ENST00000543542 CDH3P22223 829 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 CSTF2P33240 577 aaKnown RBP eCLIP6.13□□□□□ -1.43
LTBR-212ENST00000543542 RPA3P35244 121 aaPredicted RBP6.13□□□□□ -1.43
LTBR-212ENST00000543542 SLCO1A2P46721 670 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 CAPZBP47756 277 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 RAB28P51157 221 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 INHBCP55103 352 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 ATP6V0D1P61421 351 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 TARDBPQ13148 414 aaKnown RBP eCLIP6.13□□□□□ -1.43
LTBR-212ENST00000543542 SP140Q13342 867 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 GBX1Q14549 363 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 NR1D2Q14995 579 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 CLPPQ16740 277 aaPredicted RBP6.13□□□□□ -1.43
LTBR-212ENST00000543542 FAM83EQ2M2I3 478 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 THEMIS2Q5TEJ8 643 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 CACHD1Q5VU97 1274 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 KLC3Q6P597 504 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 TMEM71Q6P5X7 295 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 FBXO38Q6PIJ6 1188 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 TMPRSS12Q86WS5 348 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 SPNS2Q8IVW8 549 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 SYTL1Q8IYJ3 562 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 SPATA6LQ8N4H0 392 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 OR9A1PQ8NGU1 263 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 OR2W6PQ8NHA6 318 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 EPS8L3Q8TE67 593 aaKnown RBP6.13□□□□□ -1.43
LTBR-212ENST00000543542 DCAKDQ8WVC6 231 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 RSC1A1Q92681 617 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 EXT2Q93063 718 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 MTBPQ96DY7 904 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 MED8Q96G25 268 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 CCDC74BQ96LY2 380 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 IL17FQ96PD4 163 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 RUFY1Q96T51 708 aa6.13□□□□□ -1.43
LTBR-212ENST00000543542 NUDT22Q9BRQ3 303 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms