RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 BIRC7Q96CA5 298 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 SCRN2Q96FV2 425 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 OXNAD1Q96HP4 312 aaPredicted RBP5.06□□□□□ -1.6
CLIP1-217ENST00000543205 HRASLS5Q96KN8 279 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 COG8Q96MW5 612 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 RUNDC3BQ96NL0 473 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 MLPHQ9BV36 600 aaPredicted RBP5.06□□□□□ -1.6
CLIP1-217ENST00000543205 FICDQ9BVA6 458 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 C1QTNF7Q9BXJ2 289 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 PRDM14Q9GZV8 571 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 KCTD5Q9NXV2 234 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.06□□□□□ -1.6
CLIP1-217ENST00000543205 CHD6Q8TD26 2715 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 A0A0J9YYE9 177 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 LOC285095A0A1B0GVY8 99 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 HMX3A6NHT5 357 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 PRR5-ARHGAP8B1AHC4 643 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 ANKRD66B4E2M5 251 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 PLOD2O00469 737 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 SLC31A1O15431 190 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 FAM155BO75949 473 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 TM7SF2O76062 418 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 EPN2O95208 641 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 AGTP01019 485 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 TRBC1P01850 177 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 KRT14P02533 472 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 IGHV4-34P06331 123 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 RETP07949 1114 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 CSF1P09603 554 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 ALPIP09923 528 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 ZSCAN5DPP0CG00 497 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 HLA-DPA1P20036 260 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 CD27P26842 260 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 AKT2P31751 481 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 RPL22P35268 128 aaKnown RBP5.05□□□□□ -1.6
CLIP1-217ENST00000543205 HNF1BP35680 557 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 MMP12P39900 470 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 MANFP55145 182 aaKnown RBP5.05□□□□□ -1.6
CLIP1-217ENST00000543205 TPD52P55327 224 aaPredicted RBP5.05□□□□□ -1.6
CLIP1-217ENST00000543205 BASP1P80723 227 aaKnown RBP5.05□□□□□ -1.6
CLIP1-217ENST00000543205 CKAP4Q07065 602 aaKnown RBP5.05□□□□□ -1.6
CLIP1-217ENST00000543205 TUBB2AQ13885 445 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 ACOX1Q15067 660 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 PPP1R7Q15435 360 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 TRIP13Q15645 432 aaPredicted RBP5.05□□□□□ -1.6
CLIP1-217ENST00000543205 SLC1A5Q15758 541 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 ZNF284Q2VY69 593 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 FAXCQ5TGI0 409 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 MBNL2Q5VZF2 373 aaKnown RBP5.05□□□□□ -1.6
CLIP1-217ENST00000543205 DENND2CQ68D51 928 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 TTC27Q6P3X3 843 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 ABRAXAS1Q6UWZ7 409 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 R3HCC1LQ7Z5L2 792 aaKnown RBP5.05□□□□□ -1.6
CLIP1-217ENST00000543205 TMC3Q7Z5M5 1100 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 RABEPKQ7Z6M1 372 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 LINC00523Q86TU6 105 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 CXorf67Q86X51 503 aaPredicted RBP5.05□□□□□ -1.6
CLIP1-217ENST00000543205 SYT12Q8IV01 421 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 SUMF1Q8NBK3 374 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 ZNF540Q8NDQ6 660 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 TOR1AIP2Q8NFQ8 470 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 CCHCR1Q8TD31 782 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 TSPEARQ8WU66 669 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 KLK6Q92876 244 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 SERAC1Q96JX3 654 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 TMEM237Q96Q45 408 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 MCCC1Q96RQ3 725 aaPredicted RBP5.05□□□□□ -1.6
CLIP1-217ENST00000543205 TRIB3Q96RU7 358 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 TBL1YQ9BQ87 522 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 GORASP1Q9BQQ3 440 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 TUBB2BQ9BVA1 445 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 ITPAQ9BY32 194 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 SLC17A9Q9BYT1 436 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 ARRDC1-AS1Q9H2J1 176 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 LRRC40Q9H9A6 602 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 FANCFQ9NPI8 374 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 CATSPERZQ9NTU4 200 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 GFOD1Q9NXC2 390 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 NCDNQ9UBB6 729 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 ZFR2Q9UPR6 939 aaKnown RBP5.05□□□□□ -1.6
CLIP1-217ENST00000543205 PPIL1Q9Y3C6 166 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 PCDHGA5Q9Y5G8 931 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 SNX8Q9Y5X2 465 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 ST14Q9Y5Y6 855 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 CEP250Q9BV73 2442 aa5.05□□□□□ -1.6
CLIP1-217ENST00000543205 ATXN2Q99700 1313 aaKnown RBP5.05□□□□□ -1.6
CLIP1-217ENST00000543205 C1orf232A0A0U1RR37 186 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 NPIPB15A6NHN6 443 aaPredicted RBP5.04□□□□□ -1.6
CLIP1-217ENST00000543205 ERI2A8K979 691 aaKnown RBP5.04□□□□□ -1.6
CLIP1-217ENST00000543205 AGAP14A8MT82 685 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 PRAMEF26H0Y7S4 382 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 ZNF561-AS1K7EIQ3 104 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 BCAT2O15382 392 aaPredicted RBP5.04□□□□□ -1.6
CLIP1-217ENST00000543205 LATO43561 262 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 HEXIM1O94992 359 aaKnown RBP5.04□□□□□ -1.6
CLIP1-217ENST00000543205 CLDN7O95471 211 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 AP2A1O95782 977 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 PAK4O96013 591 aaPredicted RBP5.04□□□□□ -1.6
CLIP1-217ENST00000543205 FGF1P05230 155 aa5.04□□□□□ -1.6
CLIP1-217ENST00000543205 C6P13671 934 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms