RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 CACHD1Q5VU97 1274 aa12.67□□□□□ -0.38
DDX11-223ENST00000542838 SBSNQ6UWP8 590 aa12.67□□□□□ -0.38
DDX11-223ENST00000542838 LINC00299Q6ZSB3 139 aa12.67□□□□□ -0.38
DDX11-223ENST00000542838 B3GNT8Q7Z7M8 397 aa12.67□□□□□ -0.38
DDX11-223ENST00000542838 P2RY8Q86VZ1 359 aa12.67□□□□□ -0.38
DDX11-223ENST00000542838 MFSD4AQ8N468 514 aa12.67□□□□□ -0.38
DDX11-223ENST00000542838 GLB1L3Q8NCI6 653 aaPredicted RBP12.67□□□□□ -0.38
DDX11-223ENST00000542838 SETD9Q8NE22 299 aa12.67□□□□□ -0.38
DDX11-223ENST00000542838 CLHC1Q8NHS4 586 aa12.67□□□□□ -0.38
DDX11-223ENST00000542838 ALOXE3Q9BYJ1 711 aa12.67□□□□□ -0.38
DDX11-223ENST00000542838 MAGEH1Q9H213 219 aa12.67□□□□□ -0.38
DDX11-223ENST00000542838 NSUN3Q9H649 340 aaKnown RBP12.67□□□□□ -0.38
DDX11-223ENST00000542838 KAT8Q9H7Z6 458 aaKnown RBP12.67□□□□□ -0.38
DDX11-223ENST00000542838 SPC25Q9HBM1 224 aa12.67□□□□□ -0.38
DDX11-223ENST00000542838 KLQ9UEF7 1012 aa12.67□□□□□ -0.38
DDX11-223ENST00000542838 TPRKBQ9Y3C4 175 aa12.67□□□□□ -0.38
DDX11-223ENST00000542838 PCDHB5Q9Y5E4 795 aa12.67□□□□□ -0.38
DDX11-223ENST00000542838 RAI2Q9Y5P3 530 aa12.67□□□□□ -0.38
DDX11-223ENST00000542838 GPC6Q9Y625 555 aaPredicted RBP12.67□□□□□ -0.38
DDX11-223ENST00000542838 ZBBXA8MT70 800 aa12.66□□□□□ -0.38
DDX11-223ENST00000542838 RAD51BO15315 384 aa12.66□□□□□ -0.38
DDX11-223ENST00000542838 B4GALT3O60512 393 aa12.66□□□□□ -0.38
DDX11-223ENST00000542838 SEC22BO75396 215 aa12.66□□□□□ -0.38
DDX11-223ENST00000542838 NRIP1P48552 1158 aa12.66□□□□□ -0.38
DDX11-223ENST00000542838 KCNQ1P51787 676 aa12.66□□□□□ -0.38
DDX11-223ENST00000542838 ZC3H12BQ5HYM0 836 aaKnown RBP12.66□□□□□ -0.38
DDX11-223ENST00000542838 TMEM53Q6P2H8 277 aa12.66□□□□□ -0.38
DDX11-223ENST00000542838 OR6Q1Q8NGQ2 317 aa12.66□□□□□ -0.38
DDX11-223ENST00000542838 FBLIM1Q8WUP2 373 aa12.66□□□□□ -0.38
DDX11-223ENST00000542838 YIPF6Q96EC8 236 aa12.66□□□□□ -0.38
DDX11-223ENST00000542838 SLC6A13Q9NSD5 602 aa12.66□□□□□ -0.38
DDX11-223ENST00000542838 VNN3Q9NY84 501 aa12.66□□□□□ -0.38
DDX11-223ENST00000542838 DNMT3BQ9UBC3 853 aaKnown RBP12.66□□□□□ -0.38
DDX11-223ENST00000542838 ITGB1BP2Q9UKP3 347 aa12.66□□□□□ -0.38
DDX11-223ENST00000542838 DHRS7Q9Y394 339 aa12.66□□□□□ -0.38
DDX11-223ENST00000542838 PCDHB14Q9Y5E9 798 aa12.66□□□□□ -0.38
DDX11-223ENST00000542838 PCDHGA10Q9Y5H3 936 aa12.66□□□□□ -0.38
DDX11-223ENST00000542838 TTC36A6NLP5 189 aa12.66□□□□□ -0.38
DDX11-223ENST00000542838 FAM220BPB1ANY3 271 aa12.66□□□□□ -0.38
DDX11-223ENST00000542838 M0QX08 132 aa12.66□□□□□ -0.38
DDX11-223ENST00000542838 SLC28A1O00337 649 aa12.66□□□□□ -0.38
DDX11-223ENST00000542838 RECQL5O94762 991 aaPredicted RBP12.66□□□□□ -0.38
DDX11-223ENST00000542838 ITGB6P18564 788 aa12.66□□□□□ -0.38
DDX11-223ENST00000542838 PSMA3P25788 255 aa12.66□□□□□ -0.38
DDX11-223ENST00000542838 LAPTM4AQ15012 233 aa12.66□□□□□ -0.38
DDX11-223ENST00000542838 INAVAQ3KP66 663 aa12.66□□□□□ -0.38
DDX11-223ENST00000542838 GNASQ5JWF2 1037 aa12.66□□□□□ -0.38
DDX11-223ENST00000542838 AGAP7PQ5VUJ5 663 aa12.66□□□□□ -0.38
DDX11-223ENST00000542838 CES5AQ6NT32 575 aa12.66□□□□□ -0.38
DDX11-223ENST00000542838 PYURFQ96I23 114 aa12.66□□□□□ -0.38
DDX11-223ENST00000542838 REXO5Q96IC2 774 aaKnown RBP12.66□□□□□ -0.38
DDX11-223ENST00000542838 EGFL8Q99944 293 aa12.66□□□□□ -0.38
DDX11-223ENST00000542838 PTPN18Q99952 460 aa12.66□□□□□ -0.38
DDX11-223ENST00000542838 CCSER2Q9H7U1 834 aa12.66□□□□□ -0.38
DDX11-223ENST00000542838 FBXO8Q9NRD0 319 aa12.66□□□□□ -0.38
DDX11-223ENST00000542838 SCN3BQ9NY72 215 aa12.66□□□□□ -0.38
DDX11-223ENST00000542838 AP3M1Q9Y2T2 418 aa12.66□□□□□ -0.38
DDX11-223ENST00000542838 PMF1-BGLAPU3KQ54 211 aa12.66□□□□□ -0.38
DDX11-223ENST00000542838 CHD5Q8TDI0 1954 aa12.66□□□□□ -0.38
DDX11-223ENST00000542838 ANKRD66B4E2M5 251 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 CD6P30203 668 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 GDF5P43026 501 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 GNPDA1P46926 289 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 GTF2H3Q13889 308 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 DSC3Q14574 896 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 MAPK11Q15759 364 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 ATG9BQ674R7 924 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 SUSD1Q6UWL2 747 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 DSG4Q86SJ6 1040 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 CYP4Z1Q86W10 505 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 ZNF280BQ86YH2 543 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 ZDHHC21Q8IVQ6 265 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 C10orf111Q8N326 155 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 ASPSCR1Q9BZE9 553 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 KLHL25Q9H0H3 589 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 CLMPQ9H6B4 373 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 C1orf109Q9NX04 203 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 ELOVL2Q9NXB9 296 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 AGO1Q9UL18 857 aaKnown RBP12.65□□□□□ -0.38
DDX11-223ENST00000542838 ZNF490Q9ULM2 529 aaPredicted RBP12.65□□□□□ -0.38
DDX11-223ENST00000542838 TAPBPO15533 448 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 OAZ2O95190 189 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 MYCLP1P12525 358 aaPredicted RBP12.65□□□□□ -0.38
DDX11-223ENST00000542838 CR2P20023 1033 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 SLC6A4P31645 630 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 ARPP19P56211 112 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 HUNKP57058 714 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 NCS1P62166 190 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 CLCA4Q14CN2 919 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 HIST2H2ACQ16777 129 aaPredicted RBP12.65□□□□□ -0.38
DDX11-223ENST00000542838 LAIR1Q6GTX8 287 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 PLEKHG7Q6ZR37 379 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 SERINC5Q86VE9 423 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 DYNC2LI1Q8TCX1 351 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 PDLIM5Q96HC4 596 aaKnown RBP12.65□□□□□ -0.38
DDX11-223ENST00000542838 BARD1Q99728 777 aaKnown RBP12.65□□□□□ -0.38
DDX11-223ENST00000542838 APOL5Q9BWW9 433 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 LRTM1Q9HBL6 345 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 IL37Q9NZH6 218 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 PKP3Q9Y446 797 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms