RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 GALNT16Q8N428 558 aa14.93□□□□□ -0.02
CLSTN3-213ENST00000541953 TFGQ92734 400 aaPredicted RBP14.93□□□□□ -0.02
CLSTN3-213ENST00000541953 ULK4Q96C45 1275 aa14.93□□□□□ -0.02
CLSTN3-213ENST00000541953 SGSM3Q96HU1 749 aa14.93□□□□□ -0.02
CLSTN3-213ENST00000541953 MESP1Q9BRJ9 268 aa14.93□□□□□ -0.02
CLSTN3-213ENST00000541953 SYTL2Q9HCH5 934 aa14.93□□□□□ -0.02
CLSTN3-213ENST00000541953 SERTAD3Q9UJW9 196 aa14.93□□□□□ -0.02
CLSTN3-213ENST00000541953 KLHL20Q9Y2M5 609 aa14.93□□□□□ -0.02
CLSTN3-213ENST00000541953 AKAP9Q99996 3911 aa14.93□□□□□ -0.02
CLSTN3-213ENST00000541953 FBN2P35556 2912 aa14.93□□□□□ -0.02
CLSTN3-213ENST00000541953 KLHL33A6NCF5 533 aa14.92□□□□□ -0.02
CLSTN3-213ENST00000541953 OR2B3O76000 313 aa14.92□□□□□ -0.02
CLSTN3-213ENST00000541953 TPM3P06753 285 aa14.92□□□□□ -0.02
CLSTN3-213ENST00000541953 RBP3P10745 1247 aa14.92□□□□□ -0.02
CLSTN3-213ENST00000541953 PYGMP11217 842 aa14.92□□□□□ -0.02
CLSTN3-213ENST00000541953 RALBP11234 206 aa14.92□□□□□ -0.02
CLSTN3-213ENST00000541953 ACADLP28330 430 aa14.92□□□□□ -0.02
CLSTN3-213ENST00000541953 MAGEA1P43355 309 aa14.92□□□□□ -0.02
CLSTN3-213ENST00000541953 RRADP55042 308 aa14.92□□□□□ -0.02
CLSTN3-213ENST00000541953 EIF3EP60228 445 aaKnown RBP14.92□□□□□ -0.02
CLSTN3-213ENST00000541953 KCTD11Q693B1 232 aa14.92□□□□□ -0.02
CLSTN3-213ENST00000541953 ITPRIPL1Q6GPH6 555 aa14.92□□□□□ -0.02
CLSTN3-213ENST00000541953 RHBDD2Q6NTF9 364 aa14.92□□□□□ -0.02
CLSTN3-213ENST00000541953 C11orf63Q6NUN7 778 aa14.92□□□□□ -0.02
CLSTN3-213ENST00000541953 SARM1Q6SZW1 724 aa14.92□□□□□ -0.02
CLSTN3-213ENST00000541953 DTWD1Q8N5C7 304 aa14.92□□□□□ -0.02
CLSTN3-213ENST00000541953 ZNF655Q8N720 491 aaPredicted RBP14.92□□□□□ -0.02
CLSTN3-213ENST00000541953 SPATA13Q96N96 652 aa14.92□□□□□ -0.02
CLSTN3-213ENST00000541953 SLC29A3Q9BZD2 475 aa14.92□□□□□ -0.02
CLSTN3-213ENST00000541953 SLC7A5P2Q9GIP4 190 aa14.92□□□□□ -0.02
CLSTN3-213ENST00000541953 MVB12BQ9H7P6 319 aa14.92□□□□□ -0.02
CLSTN3-213ENST00000541953 P4HTMQ9NXG6 502 aa14.92□□□□□ -0.02
CLSTN3-213ENST00000541953 CIDEBQ9UHD4 219 aa14.92□□□□□ -0.02
CLSTN3-213ENST00000541953 CFAP99D6REC4 459 aa14.91□□□□□ -0.02
CLSTN3-213ENST00000541953 IFRD1O00458 451 aaPredicted RBP14.91□□□□□ -0.02
CLSTN3-213ENST00000541953 METTL18O95568 372 aa14.91□□□□□ -0.02
CLSTN3-213ENST00000541953 CRTAMO95727 393 aa14.91□□□□□ -0.02
CLSTN3-213ENST00000541953 DDAH2O95865 285 aa14.91□□□□□ -0.02
CLSTN3-213ENST00000541953 CHRM5P08912 532 aaPredicted RBP14.91□□□□□ -0.02
CLSTN3-213ENST00000541953 GCGRP47871 477 aa14.91□□□□□ -0.02
CLSTN3-213ENST00000541953 CD151P48509 253 aa14.91□□□□□ -0.02
CLSTN3-213ENST00000541953 MYBPC3Q14896 1274 aa14.91□□□□□ -0.02
CLSTN3-213ENST00000541953 MRPL14Q6P1L8 145 aaKnown RBP14.91□□□□□ -0.02
CLSTN3-213ENST00000541953 TAS2R42Q7RTR8 314 aa14.91□□□□□ -0.02
CLSTN3-213ENST00000541953 CDKL3Q8IVW4 592 aaPredicted RBP14.91□□□□□ -0.02
CLSTN3-213ENST00000541953 IQCKQ8N0W5 287 aa14.91□□□□□ -0.02
CLSTN3-213ENST00000541953 TAB3Q8N5C8 712 aaPredicted RBP14.91□□□□□ -0.02
CLSTN3-213ENST00000541953 TC2NQ8N9U0 490 aa14.91□□□□□ -0.02
CLSTN3-213ENST00000541953 ALG3Q92685 438 aa14.91□□□□□ -0.02
CLSTN3-213ENST00000541953 BARD1Q99728 777 aaKnown RBP14.91□□□□□ -0.02
CLSTN3-213ENST00000541953 DPH2Q9BQC3 489 aaPredicted RBP14.91□□□□□ -0.02
CLSTN3-213ENST00000541953 ARNT2Q9HBZ2 717 aa14.91□□□□□ -0.02
CLSTN3-213ENST00000541953 NLE1Q9NVX2 485 aaPredicted RBP14.91□□□□□ -0.02
CLSTN3-213ENST00000541953 B3GNT3Q9Y2A9 372 aa14.91□□□□□ -0.02
CLSTN3-213ENST00000541953 PCDHGA10Q9Y5H3 936 aa14.91□□□□□ -0.02
CLSTN3-213ENST00000541953 TEP1Q99973 2627 aaKnown RBP14.91□□□□□ -0.02
CLSTN3-213ENST00000541953 POLEQ07864 2286 aa14.9□□□□□ -0.02
CLSTN3-213ENST00000541953 BHMG1C9JSJ3 638 aaPredicted RBP14.9□□□□□ -0.02
CLSTN3-213ENST00000541953 H7C0S8 307 aa14.9□□□□□ -0.02
CLSTN3-213ENST00000541953 ZSCAN9O15535 394 aaPredicted RBP14.9□□□□□ -0.02
CLSTN3-213ENST00000541953 CBFA2T2O43439 604 aa14.9□□□□□ -0.02
CLSTN3-213ENST00000541953 AGXTP21549 392 aa14.9□□□□□ -0.02
CLSTN3-213ENST00000541953 CTNNA1P35221 906 aaKnown RBP14.9□□□□□ -0.02
CLSTN3-213ENST00000541953 FOLR3P41439 243 aa14.9□□□□□ -0.02
CLSTN3-213ENST00000541953 GDF10P55107 478 aa14.9□□□□□ -0.02
CLSTN3-213ENST00000541953 SSPNQ14714 243 aa14.9□□□□□ -0.02
CLSTN3-213ENST00000541953 POU6F1Q14863 301 aa14.9□□□□□ -0.02
CLSTN3-213ENST00000541953 GPR33Q49SQ1 333 aa14.9□□□□□ -0.02
CLSTN3-213ENST00000541953 CCDC181Q5TID7 509 aa14.9□□□□□ -0.02
CLSTN3-213ENST00000541953 IGFL3Q6UXB1 125 aa14.9□□□□□ -0.02
CLSTN3-213ENST00000541953 HPS6Q86YV9 775 aa14.9□□□□□ -0.02
CLSTN3-213ENST00000541953 GPR135Q8IZ08 494 aa14.9□□□□□ -0.02
CLSTN3-213ENST00000541953 RNF214Q8ND24 703 aa14.9□□□□□ -0.02
CLSTN3-213ENST00000541953 OR2Y1Q8NGV0 311 aa14.9□□□□□ -0.02
CLSTN3-213ENST00000541953 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.9□□□□□ -0.02
CLSTN3-213ENST00000541953 DHRS4Q9BTZ2 278 aa14.9□□□□□ -0.02
CLSTN3-213ENST00000541953 OSBPL8Q9BZF1 889 aa14.9□□□□□ -0.02
CLSTN3-213ENST00000541953 C5AR2Q9P296 337 aa14.9□□□□□ -0.02
CLSTN3-213ENST00000541953 ASF1AQ9Y294 204 aa14.9□□□□□ -0.02
CLSTN3-213ENST00000541953 PADI2Q9Y2J8 665 aa14.9□□□□□ -0.02
CLSTN3-213ENST00000541953 TDRKHQ9Y2W6 561 aaKnown RBP14.9□□□□□ -0.02
CLSTN3-213ENST00000541953 AAR2Q9Y312 384 aaKnown RBP14.9□□□□□ -0.02
CLSTN3-213ENST00000541953 PCDHA13Q9Y5I0 950 aa14.9□□□□□ -0.02
CLSTN3-213ENST00000541953 DUSP10Q9Y6W6 482 aa14.9□□□□□ -0.02
CLSTN3-213ENST00000541953 OTOGQ6ZRI0 2925 aa14.9□□□□□ -0.02
CLSTN3-213ENST00000541953 A0A0J9YY10 115 aa14.89□□□□□ -0.03
CLSTN3-213ENST00000541953 ANKUB1A6NFN9 424 aa14.89□□□□□ -0.03
CLSTN3-213ENST00000541953 AKR1B15C9JRZ8 316 aaPredicted RBP14.89□□□□□ -0.03
CLSTN3-213ENST00000541953 E2F3O00716 465 aa14.89□□□□□ -0.03
CLSTN3-213ENST00000541953 OR1I1O60431 355 aa14.89□□□□□ -0.03
CLSTN3-213ENST00000541953 HADHAP40939 763 aa14.89□□□□□ -0.03
CLSTN3-213ENST00000541953 CSE1LP55060 971 aaKnown RBP14.89□□□□□ -0.03
CLSTN3-213ENST00000541953 DCDP81605 110 aaKnown RBP14.89□□□□□ -0.03
CLSTN3-213ENST00000541953 RPA4Q13156 261 aa14.89□□□□□ -0.03
CLSTN3-213ENST00000541953 HIF1AQ16665 826 aa14.89□□□□□ -0.03
CLSTN3-213ENST00000541953 NKAIN1Q4KMZ8 207 aa14.89□□□□□ -0.03
CLSTN3-213ENST00000541953 CCDC38Q502W7 563 aa14.89□□□□□ -0.03
CLSTN3-213ENST00000541953 DARS2Q6PI48 645 aaKnown RBP14.89□□□□□ -0.03
CLSTN3-213ENST00000541953 Q6ZS92 163 aa14.89□□□□□ -0.03
CLSTN3-213ENST00000541953 COX15Q7KZN9 410 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms