RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 PI15O43692 258 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 SNX3O60493 162 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 DEAF1O75398 565 aaPredicted RBP7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 CDK14O94921 469 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 UBOX5O94941 541 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 ACADSP16219 412 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 IGFALSP35858 605 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 DCDC1P59894 354 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 MRPS21P82921 87 aaKnown RBP7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 STX3Q13277 289 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 NFE2L1Q14494 772 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 RSPO4Q2I0M5 234 aaPredicted RBP7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 TSNAXIP1Q2TAA8 658 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 UGT3A1Q6NUS8 523 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 PNCKQ6P2M8 343 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 ASRGL1Q7L266 308 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 ADGRG6Q86SQ4 1221 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 PHYKPLQ8IUZ5 450 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 RAVER1Q8IY67 606 aaKnown RBP7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 KIRREL3Q8IZU9 778 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 IL22RA1Q8N6P7 574 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 PTGR2Q8N8N7 351 aaPredicted RBP7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 DDHD1Q8NEL9 900 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 SNX19Q92543 992 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 KLHL29Q96CT2 875 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 ATOH8Q96SQ7 321 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 UHRF1Q96T88 793 aaPredicted RBP7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 EBF4Q9BQW3 602 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 YIPF3Q9GZM5 350 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 TBC1D17Q9HA65 648 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 LTB4R2Q9NPC1 389 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 PAPOLBQ9NRJ5 636 aaKnown RBP7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 TXLNGQ9NUQ3 528 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 OXSMQ9NWU1 459 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 THEGQ9P2T0 379 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 SLC23A2Q9UGH3 650 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 PNMA8BQ9ULN7 279 aaPredicted RBP7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 DHRS7Q9Y394 339 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 PTGDR2Q9Y5Y4 395 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 COMMD10Q9Y6G5 202 aa7.57□□□□□ -1.2
AC005840.3-201ENST00000541888 ARHGEF17Q96PE2 2063 aaPredicted RBP7.56□□□□□ -1.2
AC005840.3-201ENST00000541888 ENO4A6NNW6 628 aa7.56□□□□□ -1.2
AC005840.3-201ENST00000541888 UBFD1O14562 309 aaKnown RBP7.56□□□□□ -1.2
AC005840.3-201ENST00000541888 LMNAP02545 664 aaKnown RBP7.56□□□□□ -1.2
AC005840.3-201ENST00000541888 PYGLP06737 847 aa7.56□□□□□ -1.2
AC005840.3-201ENST00000541888 GFAPP14136 432 aa7.56□□□□□ -1.2
AC005840.3-201ENST00000541888 ATP6V1C1P21283 382 aa7.56□□□□□ -1.2
AC005840.3-201ENST00000541888 RPL10P27635 214 aaKnown RBP7.56□□□□□ -1.2
AC005840.3-201ENST00000541888 CDK3Q00526 305 aa7.56□□□□□ -1.2
AC005840.3-201ENST00000541888 OCRLQ01968 901 aa7.56□□□□□ -1.2
AC005840.3-201ENST00000541888 DMWDQ09019 674 aa7.56□□□□□ -1.2
AC005840.3-201ENST00000541888 HYAL2Q12891 473 aa7.56□□□□□ -1.2
AC005840.3-201ENST00000541888 ABRQ12979 859 aa7.56□□□□□ -1.2
AC005840.3-201ENST00000541888 ACAP2Q15057 778 aa7.56□□□□□ -1.2
AC005840.3-201ENST00000541888 INSCQ1MX18 579 aa7.56□□□□□ -1.2
AC005840.3-201ENST00000541888 HSF5Q4G112 596 aaPredicted RBP7.56□□□□□ -1.2
AC005840.3-201ENST00000541888 NKAPLQ5M9Q1 402 aa7.56□□□□□ -1.2
AC005840.3-201ENST00000541888 CLEC6AQ6EIG7 209 aa7.56□□□□□ -1.2
AC005840.3-201ENST00000541888 KLC3Q6P597 504 aa7.56□□□□□ -1.2
AC005840.3-201ENST00000541888 SBSNQ6UWP8 590 aa7.56□□□□□ -1.2
AC005840.3-201ENST00000541888 XKR5Q6UX68 686 aa7.56□□□□□ -1.2
AC005840.3-201ENST00000541888 MACC1Q6ZN28 852 aa7.56□□□□□ -1.2
AC005840.3-201ENST00000541888 FAM83HQ6ZRV2 1179 aaPredicted RBP7.56□□□□□ -1.2
AC005840.3-201ENST00000541888 RD3Q7Z3Z2 195 aa7.56□□□□□ -1.2
AC005840.3-201ENST00000541888 MAVSQ7Z434 540 aa7.56□□□□□ -1.2
AC005840.3-201ENST00000541888 SPATA21Q7Z572 469 aa7.56□□□□□ -1.2
AC005840.3-201ENST00000541888 LSMEM2Q8N112 164 aa7.56□□□□□ -1.2
AC005840.3-201ENST00000541888 TP53I13Q8NBR0 393 aaPredicted RBP7.56□□□□□ -1.2
AC005840.3-201ENST00000541888 HCAR2Q8TDS4 363 aa7.56□□□□□ -1.2
AC005840.3-201ENST00000541888 GRAMD1AQ96CP6 724 aa7.56□□□□□ -1.2
AC005840.3-201ENST00000541888 KCNA7Q96RP8 456 aa7.56□□□□□ -1.2
AC005840.3-201ENST00000541888 MRPL57Q9BQC6 102 aaKnown RBP7.56□□□□□ -1.2
AC005840.3-201ENST00000541888 SLC17A9Q9BYT1 436 aa7.56□□□□□ -1.2
AC005840.3-201ENST00000541888 VCXQ9H320 206 aa7.56□□□□□ -1.2
AC005840.3-201ENST00000541888 SEMA4BQ9NPR2 832 aaPredicted RBP7.56□□□□□ -1.2
AC005840.3-201ENST00000541888 EIF2B4Q9UI10 523 aaKnown RBP7.56□□□□□ -1.2
AC005840.3-201ENST00000541888 CDYLQ9Y232 598 aa7.56□□□□□ -1.2
AC005840.3-201ENST00000541888 ARL2BPQ9Y2Y0 163 aa7.56□□□□□ -1.2
AC005840.3-201ENST00000541888 L3MBTL1Q9Y468 752 aa7.56□□□□□ -1.2
AC005840.3-201ENST00000541888 LRRC42Q9Y546 428 aa7.56□□□□□ -1.2
AC005840.3-201ENST00000541888 TP53BP1Q12888 1972 aaPredicted RBP7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 GOLGA4Q13439 2230 aaKnown RBP7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 PRAMEF33A0A0G2JMD5 474 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 GOLGA8QA0A0J9YX86 632 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 KANSL1LA0AUZ9 987 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 GOLGA8OA6NCC3 632 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 GOLGA8NF8WBI6 632 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 PFDN6O15212 129 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 TRIM13O60858 407 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 SNNO75324 88 aaPredicted RBP7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 SUPT7LO94864 414 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 HSPA4LO95757 839 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 OR56A5P0C7T3 313 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 RPS3P23396 243 aaKnown RBP eCLIP7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 MAOBP27338 520 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 AOAHP28039 575 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 EEF1DP29692 281 aaKnown RBP7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 PRDX3P30048 256 aaKnown RBP7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 BDKRB1P46663 353 aa7.55□□□□□ -1.2
AC005840.3-201ENST00000541888 EIF1AXP47813 144 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms