RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 PARP6Q2NL67 630 aa23.19■■□□□ 1.3
LEMD3-203ENST00000541171 ZNF385CQ66K41 422 aaPredicted RBP23.19■■□□□ 1.3
LEMD3-203ENST00000541171 NAPRTQ6XQN6 538 aa23.19■■□□□ 1.3
LEMD3-203ENST00000541171 FAM71DQ8N9W8 422 aa23.19■■□□□ 1.3
LEMD3-203ENST00000541171 ELMO1Q92556 727 aa23.19■■□□□ 1.3
LEMD3-203ENST00000541171 ALG3Q92685 438 aa23.19■■□□□ 1.3
LEMD3-203ENST00000541171 TBRG4Q969Z0 631 aaKnown RBP eCLIP23.19■■□□□ 1.3
LEMD3-203ENST00000541171 ALS2CR12Q96Q35 445 aa23.19■■□□□ 1.3
LEMD3-203ENST00000541171 DHRS4Q9BTZ2 278 aa23.19■■□□□ 1.3
LEMD3-203ENST00000541171 SPHK1Q9NYA1 384 aa23.19■■□□□ 1.3
LEMD3-203ENST00000541171 AP2A2O94973 939 aa23.18■■□□□ 1.3
LEMD3-203ENST00000541171 RNF224P0DH78 156 aa23.18■■□□□ 1.3
LEMD3-203ENST00000541171 SHMT2P34897 504 aa23.18■■□□□ 1.3
LEMD3-203ENST00000541171 ZIC1Q15915 447 aa23.18■■□□□ 1.3
LEMD3-203ENST00000541171 KCTD11Q693B1 232 aa23.18■■□□□ 1.3
LEMD3-203ENST00000541171 HPS6Q86YV9 775 aa23.18■■□□□ 1.3
LEMD3-203ENST00000541171 STYXQ8WUJ0 223 aa23.18■■□□□ 1.3
LEMD3-203ENST00000541171 PNPLA2Q96AD5 504 aa23.18■■□□□ 1.3
LEMD3-203ENST00000541171 TCTN2Q96GX1 697 aa23.18■■□□□ 1.3
LEMD3-203ENST00000541171 OR2A14Q96R47 310 aa23.18■■□□□ 1.3
LEMD3-203ENST00000541171 SMAD5Q99717 465 aaKnown RBP23.18■■□□□ 1.3
LEMD3-203ENST00000541171 LRRC40Q9H9A6 602 aa23.18■■□□□ 1.3
LEMD3-203ENST00000541171 IRAK4Q9NWZ3 460 aa23.18■■□□□ 1.3
LEMD3-203ENST00000541171 PTRH2Q9Y3E5 179 aaKnown RBP23.18■■□□□ 1.3
LEMD3-203ENST00000541171 EPN1Q9Y6I3 576 aaPredicted RBP23.18■■□□□ 1.3
LEMD3-203ENST00000541171 OR51F1A6NGY5 319 aa23.17■■□□□ 1.3
LEMD3-203ENST00000541171 SOWAHDA6NJG2 315 aa23.17■■□□□ 1.3
LEMD3-203ENST00000541171 LIN7AO14910 233 aaPredicted RBP23.17■■□□□ 1.3
LEMD3-203ENST00000541171 KRT86O43790 486 aa23.17■■□□□ 1.3
LEMD3-203ENST00000541171 KLF7O75840 302 aaPredicted RBP23.17■■□□□ 1.3
LEMD3-203ENST00000541171 CTSBP07858 339 aa23.17■■□□□ 1.3
LEMD3-203ENST00000541171 CHRM5P08912 532 aaPredicted RBP23.17■■□□□ 1.3
LEMD3-203ENST00000541171 GSTM1P09488 218 aa23.17■■□□□ 1.3
LEMD3-203ENST00000541171 GSTM4Q03013 218 aa23.17■■□□□ 1.3
LEMD3-203ENST00000541171 SLC9A5Q14940 896 aa23.17■■□□□ 1.3
LEMD3-203ENST00000541171 MRGPREQ86SM8 312 aa23.17■■□□□ 1.3
LEMD3-203ENST00000541171 TMTC1Q8IUR5 882 aa23.17■■□□□ 1.3
LEMD3-203ENST00000541171 KLHDC8BQ8IXV7 354 aa23.17■■□□□ 1.3
LEMD3-203ENST00000541171 PRR7Q8TB68 274 aa23.17■■□□□ 1.3
LEMD3-203ENST00000541171 C19orf60Q96EN9 201 aa23.17■■□□□ 1.3
LEMD3-203ENST00000541171 SLC29A3Q9BZD2 475 aa23.17■■□□□ 1.3
LEMD3-203ENST00000541171 PLAGL1Q9UM63 463 aa23.17■■□□□ 1.3
LEMD3-203ENST00000541171 AP1M2Q9Y6Q5 423 aa23.17■■□□□ 1.3
LEMD3-203ENST00000541171 PCSK5Q92824 1860 aa23.17■■□□□ 1.3
LEMD3-203ENST00000541171 A1L4Q6 167 aa23.16■■□□□ 1.3
LEMD3-203ENST00000541171 FOLR3P41439 243 aa23.16■■□□□ 1.3
LEMD3-203ENST00000541171 NSG1P42857 185 aa23.16■■□□□ 1.3
LEMD3-203ENST00000541171 FOXL2P58012 376 aa23.16■■□□□ 1.3
LEMD3-203ENST00000541171 SSPNQ14714 243 aa23.16■■□□□ 1.3
LEMD3-203ENST00000541171 ZNF655Q8N720 491 aaPredicted RBP23.16■■□□□ 1.3
LEMD3-203ENST00000541171 CALR3Q96L12 384 aaKnown RBP23.16■■□□□ 1.3
LEMD3-203ENST00000541171 C17orf62Q9BQA9 187 aa23.16■■□□□ 1.3
LEMD3-203ENST00000541171 IFT80Q9P2H3 777 aaPredicted RBP23.16■■□□□ 1.3
LEMD3-203ENST00000541171 DHCR7Q9UBM7 475 aaKnown RBP23.16■■□□□ 1.3
LEMD3-203ENST00000541171 NDOR1Q9UHB4 597 aa23.16■■□□□ 1.3
LEMD3-203ENST00000541171 CDYLQ9Y232 598 aa23.16■■□□□ 1.3
LEMD3-203ENST00000541171 PRRC2CQ9Y520 2896 aaKnown RBP23.16■■□□□ 1.3
LEMD3-203ENST00000541171 A0A0J9YY10 115 aa23.15■■□□□ 1.3
LEMD3-203ENST00000541171 GOLGA6L9A6NEM1 432 aa23.15■■□□□ 1.3
LEMD3-203ENST00000541171 ISM1B1AKI9 464 aa23.15■■□□□ 1.3
LEMD3-203ENST00000541171 PEX12O00623 359 aa23.15■■□□□ 1.3
LEMD3-203ENST00000541171 ZNF189O75820 626 aaPredicted RBP23.15■■□□□ 1.3
LEMD3-203ENST00000541171 IPO7O95373 1038 aaKnown RBP23.15■■□□□ 1.3
LEMD3-203ENST00000541171 FTH1P02794 183 aa23.15■■□□□ 1.3
LEMD3-203ENST00000541171 TPBGLP0DKB5 382 aa23.15■■□□□ 1.3
LEMD3-203ENST00000541171 MSNP26038 577 aaKnown RBP23.15■■□□□ 1.3
LEMD3-203ENST00000541171 ACADLP28330 430 aa23.15■■□□□ 1.3
LEMD3-203ENST00000541171 GABRA4P48169 554 aa23.15■■□□□ 1.3
LEMD3-203ENST00000541171 CSE1LP55060 971 aaKnown RBP23.15■■□□□ 1.3
LEMD3-203ENST00000541171 DCDP81605 110 aaKnown RBP23.15■■□□□ 1.3
LEMD3-203ENST00000541171 PLEKHN1Q494U1 663 aaPredicted RBP23.15■■□□□ 1.3
LEMD3-203ENST00000541171 SYTL3Q4VX76 610 aa23.15■■□□□ 1.3
LEMD3-203ENST00000541171 CCDC38Q502W7 563 aa23.15■■□□□ 1.3
LEMD3-203ENST00000541171 VWA5B1Q5TIE3 1220 aa23.15■■□□□ 1.3
LEMD3-203ENST00000541171 RHBDD2Q6NTF9 364 aa23.15■■□□□ 1.3
LEMD3-203ENST00000541171 TBC1D21Q8IYX1 336 aa23.15■■□□□ 1.3
LEMD3-203ENST00000541171 FER1L6-AS2Q96M78 137 aa23.15■■□□□ 1.3
LEMD3-203ENST00000541171 GBP5Q96PP8 586 aa23.15■■□□□ 1.3
LEMD3-203ENST00000541171 TXLNGQ9NUQ3 528 aa23.15■■□□□ 1.3
LEMD3-203ENST00000541171 C5AR2Q9P296 337 aa23.15■■□□□ 1.3
LEMD3-203ENST00000541171 IMPACTQ9P2X3 320 aa23.15■■□□□ 1.3
LEMD3-203ENST00000541171 POLG2Q9UHN1 485 aa23.15■■□□□ 1.3
LEMD3-203ENST00000541171 TEX15Q9BXT5 2789 aa23.15■■□□□ 1.3
LEMD3-203ENST00000541171 NBPF19A0A087WUL8 3843 aa23.14■■□□□ 1.3
LEMD3-203ENST00000541171 NOTCH2Q04721 2471 aa23.14■■□□□ 1.29
LEMD3-203ENST00000541171 PIKFYVEQ9Y2I7 2098 aa23.14■■□□□ 1.29
LEMD3-203ENST00000541171 H3BMH7 237 aa23.14■■□□□ 1.29
LEMD3-203ENST00000541171 MASP2O00187 686 aa23.14■■□□□ 1.29
LEMD3-203ENST00000541171 VARSP26640 1264 aaKnown RBP23.14■■□□□ 1.29
LEMD3-203ENST00000541171 GDF10P55107 478 aa23.14■■□□□ 1.29
LEMD3-203ENST00000541171 ITIH4Q14624 930 aa23.14■■□□□ 1.29
LEMD3-203ENST00000541171 FAM20CQ8IXL6 584 aa23.14■■□□□ 1.29
LEMD3-203ENST00000541171 TTC13Q8NBP0 860 aa23.14■■□□□ 1.29
LEMD3-203ENST00000541171 CLEC1AQ8NC01 280 aa23.14■■□□□ 1.29
LEMD3-203ENST00000541171 FLVCR1-AS1Q8TAF5 88 aa23.14■■□□□ 1.29
LEMD3-203ENST00000541171 IP6K3Q96PC2 410 aa23.14■■□□□ 1.29
LEMD3-203ENST00000541171 LACRTQ9GZZ8 138 aa23.14■■□□□ 1.29
LEMD3-203ENST00000541171 CUEDC1Q9NWM3 386 aaPredicted RBP23.14■■□□□ 1.29
LEMD3-203ENST00000541171 REXO2Q9Y3B8 237 aaKnown RBP23.14■■□□□ 1.29
LEMD3-203ENST00000541171 CCDC162PA2VCL2 907 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms