RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 PAQR3Q6TCH7 311 aa18.24■□□□□ 0.51
VPS33A-205ENST00000541169 KMT5CQ86Y97 462 aa18.24■□□□□ 0.51
VPS33A-205ENST00000541169 SLITRK4Q8IW52 837 aa18.24■□□□□ 0.51
VPS33A-205ENST00000541169 LSMEM2Q8N112 164 aa18.24■□□□□ 0.51
VPS33A-205ENST00000541169 OR4E2Q8NGC2 313 aa18.24■□□□□ 0.51
VPS33A-205ENST00000541169 CFAP61Q8NHU2 1237 aa18.24■□□□□ 0.51
VPS33A-205ENST00000541169 GIMAP7Q8NHV1 300 aa18.24■□□□□ 0.51
VPS33A-205ENST00000541169 MCOLN3Q8TDD5 553 aa18.24■□□□□ 0.51
VPS33A-205ENST00000541169 HGH1Q9BTY7 390 aa18.24■□□□□ 0.51
VPS33A-205ENST00000541169 TRIM54Q9BYV2 358 aa18.24■□□□□ 0.51
VPS33A-205ENST00000541169 RDH14Q9HBH5 336 aa18.24■□□□□ 0.51
VPS33A-205ENST00000541169 HRASLS2Q9NWW9 162 aa18.24■□□□□ 0.51
VPS33A-205ENST00000541169 SPATA7Q9P0W8 599 aa18.24■□□□□ 0.51
VPS33A-205ENST00000541169 SLC17A6Q9P2U8 582 aa18.24■□□□□ 0.51
VPS33A-205ENST00000541169 GALPQ9UBC7 116 aa18.24■□□□□ 0.51
VPS33A-205ENST00000541169 SLC39A10Q9ULF5 831 aa18.24■□□□□ 0.51
VPS33A-205ENST00000541169 CCDC187A0A096LP49 1063 aa18.23■□□□□ 0.51
VPS33A-205ENST00000541169 CCDC189A1A4V9 331 aa18.23■□□□□ 0.51
VPS33A-205ENST00000541169 C2orf74A8MZ97 194 aa18.23■□□□□ 0.51
VPS33A-205ENST00000541169 RIPK2O43353 540 aa18.23■□□□□ 0.51
VPS33A-205ENST00000541169 KRT38O76015 456 aa18.23■□□□□ 0.51
VPS33A-205ENST00000541169 ITGA2BP08514 1039 aa18.23■□□□□ 0.51
VPS33A-205ENST00000541169 THRAP10827 490 aa18.23■□□□□ 0.51
VPS33A-205ENST00000541169 ZNF37AP17032 561 aaPredicted RBP18.23■□□□□ 0.51
VPS33A-205ENST00000541169 CYP2A7P20853 494 aa18.23■□□□□ 0.51
VPS33A-205ENST00000541169 CRABP2P29373 138 aa18.23■□□□□ 0.51
VPS33A-205ENST00000541169 TIAL1Q01085 375 aaKnown RBP eCLIP18.23■□□□□ 0.51
VPS33A-205ENST00000541169 PRKG2Q13237 762 aa18.23■□□□□ 0.51
VPS33A-205ENST00000541169 USP10Q14694 798 aaKnown RBP18.23■□□□□ 0.51
VPS33A-205ENST00000541169 KIR2DS3Q14952 304 aa18.23■□□□□ 0.51
VPS33A-205ENST00000541169 NKAIN2Q5VXU1 208 aa18.23■□□□□ 0.51
VPS33A-205ENST00000541169 CPNE9Q8IYJ1 553 aa18.23■□□□□ 0.51
VPS33A-205ENST00000541169 WDR36Q8NI36 951 aaKnown RBP18.23■□□□□ 0.51
VPS33A-205ENST00000541169 HMGCLL1Q8TB92 370 aa18.23■□□□□ 0.51
VPS33A-205ENST00000541169 SLC44A1Q8WWI5 657 aa18.23■□□□□ 0.51
VPS33A-205ENST00000541169 ATXN7L3BQ96GX2 97 aa18.23■□□□□ 0.51
VPS33A-205ENST00000541169 NUDT22Q9BRQ3 303 aa18.23■□□□□ 0.51
VPS33A-205ENST00000541169 GPAMQ9HCL2 828 aa18.23■□□□□ 0.51
VPS33A-205ENST00000541169 OGFRQ9NZT2 677 aa18.23■□□□□ 0.51
VPS33A-205ENST00000541169 ATXN7L1Q9ULK2 861 aaPredicted RBP18.23■□□□□ 0.51
VPS33A-205ENST00000541169 TDRKHQ9Y2W6 561 aaKnown RBP18.23■□□□□ 0.51
VPS33A-205ENST00000541169 IGHV5-10-1A0A0J9YXX1 117 aa18.22■□□□□ 0.51
VPS33A-205ENST00000541169 OR6C74A6NCV1 312 aa18.22■□□□□ 0.51
VPS33A-205ENST00000541169 RASGRF2O14827 1237 aa18.22■□□□□ 0.51
VPS33A-205ENST00000541169 CAPN5O15484 640 aaPredicted RBP18.22■□□□□ 0.51
VPS33A-205ENST00000541169 MAP3K7O43318 606 aa18.22■□□□□ 0.51
VPS33A-205ENST00000541169 ENO2P09104 434 aaPredicted RBP18.22■□□□□ 0.51
VPS33A-205ENST00000541169 HIST1H2AGP0C0S8 130 aaPredicted RBP18.22■□□□□ 0.51
VPS33A-205ENST00000541169 FAM153BP0C7A2 387 aa18.22■□□□□ 0.51
VPS33A-205ENST00000541169 TYRP1P17643 537 aa18.22■□□□□ 0.51
VPS33A-205ENST00000541169 HIST1H2ADP20671 130 aa18.22■□□□□ 0.51
VPS33A-205ENST00000541169 CSF2RBP32927 897 aa18.22■□□□□ 0.51
VPS33A-205ENST00000541169 MSH2P43246 934 aa18.22■□□□□ 0.51
VPS33A-205ENST00000541169 TAS2R39P59534 338 aa18.22■□□□□ 0.51
VPS33A-205ENST00000541169 RAB10P61026 200 aa18.22■□□□□ 0.51
VPS33A-205ENST00000541169 FAM153CQ494X1 144 aa18.22■□□□□ 0.51
VPS33A-205ENST00000541169 PHF19Q5T6S3 580 aa18.22■□□□□ 0.51
VPS33A-205ENST00000541169 ANKS6Q68DC2 871 aa18.22■□□□□ 0.51
VPS33A-205ENST00000541169 CYHR1Q6ZMK1 362 aa18.22■□□□□ 0.51
VPS33A-205ENST00000541169 PRSS42Q7Z5A4 293 aa18.22■□□□□ 0.51
VPS33A-205ENST00000541169 AGBL5Q8NDL9 886 aa18.22■□□□□ 0.51
VPS33A-205ENST00000541169 EEF1AKMT1Q8WVE0 214 aa18.22■□□□□ 0.51
VPS33A-205ENST00000541169 NXPE2Q96DL1 559 aa18.22■□□□□ 0.51
VPS33A-205ENST00000541169 LINGO1Q96FE5 620 aa18.22■□□□□ 0.51
VPS33A-205ENST00000541169 HIST1H2AHQ96KK5 128 aa18.22■□□□□ 0.51
VPS33A-205ENST00000541169 SLC30A3Q99726 388 aa18.22■□□□□ 0.51
VPS33A-205ENST00000541169 OLFM1Q99784 485 aa18.22■□□□□ 0.51
VPS33A-205ENST00000541169 HIST1H2AJQ99878 128 aa18.22■□□□□ 0.51
VPS33A-205ENST00000541169 H2AFJQ9BTM1 129 aa18.22■□□□□ 0.51
VPS33A-205ENST00000541169 B3GNT4Q9C0J1 378 aa18.22■□□□□ 0.51
VPS33A-205ENST00000541169 NOVA2Q9UNW9 492 aaKnown RBP18.22■□□□□ 0.51
VPS33A-205ENST00000541169 PRAMEF33A0A0G2JMD5 474 aa18.21■□□□□ 0.51
VPS33A-205ENST00000541169 EXOC1LA0A1B0GW35 172 aa18.21■□□□□ 0.51
VPS33A-205ENST00000541169 PIPSLA2A3N6 862 aa18.21■□□□□ 0.51
VPS33A-205ENST00000541169 TLCD2A6NGC4 264 aa18.21■□□□□ 0.51
VPS33A-205ENST00000541169 MYO1CO00159 1063 aa18.21■□□□□ 0.51
VPS33A-205ENST00000541169 F7P08709 466 aaPredicted RBP18.21■□□□□ 0.51
VPS33A-205ENST00000541169 SAT1P21673 171 aa18.21■□□□□ 0.51
VPS33A-205ENST00000541169 PKLRP30613 574 aa18.21■□□□□ 0.51
VPS33A-205ENST00000541169 CSTF2P33240 577 aaKnown RBP eCLIP18.21■□□□□ 0.51
VPS33A-205ENST00000541169 ABCG1P45844 678 aa18.21■□□□□ 0.51
VPS33A-205ENST00000541169 PDX1P52945 283 aa18.21■□□□□ 0.51
VPS33A-205ENST00000541169 AP1S2P56377 157 aa18.21■□□□□ 0.51
VPS33A-205ENST00000541169 NAA25Q14CX7 972 aa18.21■□□□□ 0.51
VPS33A-205ENST00000541169 ZKSCAN8Q15776 578 aaPredicted RBP18.21■□□□□ 0.51
VPS33A-205ENST00000541169 IRGCQ6NXR0 463 aa18.21■□□□□ 0.51
VPS33A-205ENST00000541169 IGF2-ASQ6U949 168 aa18.21■□□□□ 0.51
VPS33A-205ENST00000541169 ZNF574Q6ZN55 896 aaPredicted RBP18.21■□□□□ 0.51
VPS33A-205ENST00000541169 ARHGAP22Q7Z5H3 698 aa18.21■□□□□ 0.51
VPS33A-205ENST00000541169 RASGRP3Q8IV61 690 aa18.21■□□□□ 0.51
VPS33A-205ENST00000541169 OR9A1PQ8NGU1 263 aa18.21■□□□□ 0.51
VPS33A-205ENST00000541169 OR2L8Q8NGY9 312 aa18.21■□□□□ 0.51
VPS33A-205ENST00000541169 RSC1A1Q92681 617 aa18.21■□□□□ 0.51
VPS33A-205ENST00000541169 SLC12A9Q9BXP2 914 aa18.21■□□□□ 0.51
VPS33A-205ENST00000541169 TWSG1Q9GZX9 223 aa18.21■□□□□ 0.51
VPS33A-205ENST00000541169 PARVBQ9HBI1 364 aa18.21■□□□□ 0.51
VPS33A-205ENST00000541169 SEMA5BQ9P283 1151 aa18.21■□□□□ 0.51
VPS33A-205ENST00000541169 ICKQ9UPZ9 632 aa18.21■□□□□ 0.51
VPS33A-205ENST00000541169 MTO1Q9Y2Z2 717 aaKnown RBP18.21■□□□□ 0.51
VPS33A-205ENST00000541169 PCDHGA8Q9Y5G5 932 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms